Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV7A0A075B6U4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV7A0A075B6U4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV7A0A075B6U4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.05■□□□□ -0
TRAV7A0A075B6U4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV7A0A075B6U4 AC145676.1-201ENST00000514988 2004 ntBASIC15.05■□□□□ -0
TRAV7A0A075B6U4 AL139393.2-201ENST00000608721 2025 ntBASIC15.05■□□□□ -0
TRAV7A0A075B6U4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV7A0A075B6U4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV7A0A075B6U4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV7A0A075B6U4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC15.04■□□□□ -0
TRAV7A0A075B6U4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV7A0A075B6U4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV7A0A075B6U4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV7A0A075B6U4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV7A0A075B6U4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRAV7A0A075B6U4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV7A0A075B6U4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV7A0A075B6U4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV7A0A075B6U4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV7A0A075B6U4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV7A0A075B6U4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV7A0A075B6U4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC15□□□□□ -0.01
TRAV7A0A075B6U4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV7A0A075B6U4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV7A0A075B6U4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV7A0A075B6U4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV7A0A075B6U4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV7A0A075B6U4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV7A0A075B6U4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV7A0A075B6U4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV7A0A075B6U4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV7A0A075B6U4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV7A0A075B6U4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRAV7A0A075B6U4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV7A0A075B6U4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAV7A0A075B6U4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV7A0A075B6U4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV7A0A075B6U4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV7A0A075B6U4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV7A0A075B6U4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV7A0A075B6U4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV7A0A075B6U4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV7A0A075B6U4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV7A0A075B6U4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV7A0A075B6U4 AC068473.5-201ENST00000616428 2072 ntBASIC14.93□□□□□ -0.02
TRAV7A0A075B6U4 AL135925.1-201ENST00000605920 1701 ntBASIC14.92□□□□□ -0.02
TRAV7A0A075B6U4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV7A0A075B6U4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV7A0A075B6U4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV7A0A075B6U4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAV7A0A075B6U4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV7A0A075B6U4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV7A0A075B6U4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV7A0A075B6U4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV7A0A075B6U4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms