RNA–Protein interactions for RNA: ENST00000642114.1

SAMMSON-227, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-227ENST00000642114 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
SAMMSON-227ENST00000642114 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
SAMMSON-227ENST00000642114 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
SAMMSON-227ENST00000642114 PHF23Q9BUL5 403 aaPredicted RBP19.4■□□□□ 0.7
SAMMSON-227ENST00000642114 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SAMMSON-227ENST00000642114 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
SAMMSON-227ENST00000642114 MSH5O43196 834 aa17.19■□□□□ 0.34
SAMMSON-227ENST00000642114 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
SAMMSON-227ENST00000642114 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
SAMMSON-227ENST00000642114 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SAMMSON-227ENST00000642114 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SAMMSON-227ENST00000642114 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
SAMMSON-227ENST00000642114 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
SAMMSON-227ENST00000642114 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
SAMMSON-227ENST00000642114 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
SAMMSON-227ENST00000642114 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
SAMMSON-227ENST00000642114 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
SAMMSON-227ENST00000642114 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
SAMMSON-227ENST00000642114 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
SAMMSON-227ENST00000642114 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
SAMMSON-227ENST00000642114 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
SAMMSON-227ENST00000642114 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
SAMMSON-227ENST00000642114 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
SAMMSON-227ENST00000642114 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
SAMMSON-227ENST00000642114 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
SAMMSON-227ENST00000642114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
SAMMSON-227ENST00000642114 KCNA4P22459 653 aa14.18□□□□□ -0.14
SAMMSON-227ENST00000642114 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
SAMMSON-227ENST00000642114 CAPN15O75808 1086 aa13.82□□□□□ -0.2
SAMMSON-227ENST00000642114 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
SAMMSON-227ENST00000642114 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
SAMMSON-227ENST00000642114 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
SAMMSON-227ENST00000642114 DSG3P32926 999 aa13.69□□□□□ -0.22
SAMMSON-227ENST00000642114 APLP2Q06481 763 aa13.68□□□□□ -0.22
SAMMSON-227ENST00000642114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
SAMMSON-227ENST00000642114 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
SAMMSON-227ENST00000642114 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-227ENST00000642114 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-227ENST00000642114 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
SAMMSON-227ENST00000642114 ABCB7O75027 752 aa13.47□□□□□ -0.25
SAMMSON-227ENST00000642114 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
SAMMSON-227ENST00000642114 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
SAMMSON-227ENST00000642114 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
SAMMSON-227ENST00000642114 POLA2Q14181 598 aa13.2□□□□□ -0.3
SAMMSON-227ENST00000642114 POTEHQ6S545 545 aa13.16□□□□□ -0.3
SAMMSON-227ENST00000642114 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
SAMMSON-227ENST00000642114 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
SAMMSON-227ENST00000642114 ZBTB22O15209 634 aa12.99□□□□□ -0.33
SAMMSON-227ENST00000642114 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-227ENST00000642114 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
SAMMSON-227ENST00000642114 ABCC9O60706 1549 aa12.85□□□□□ -0.35
SAMMSON-227ENST00000642114 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
SAMMSON-227ENST00000642114 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
SAMMSON-227ENST00000642114 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
SAMMSON-227ENST00000642114 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
SAMMSON-227ENST00000642114 FBLN2P98095 1184 aa12.65□□□□□ -0.38
SAMMSON-227ENST00000642114 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
SAMMSON-227ENST00000642114 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
SAMMSON-227ENST00000642114 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
SAMMSON-227ENST00000642114 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
SAMMSON-227ENST00000642114 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
SAMMSON-227ENST00000642114 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
SAMMSON-227ENST00000642114 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SAMMSON-227ENST00000642114 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
SAMMSON-227ENST00000642114 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
SAMMSON-227ENST00000642114 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
SAMMSON-227ENST00000642114 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
SAMMSON-227ENST00000642114 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
SAMMSON-227ENST00000642114 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
SAMMSON-227ENST00000642114 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
SAMMSON-227ENST00000642114 HAX1O00165 279 aa12.32□□□□□ -0.44
SAMMSON-227ENST00000642114 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
SAMMSON-227ENST00000642114 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SAMMSON-227ENST00000642114 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
SAMMSON-227ENST00000642114 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
SAMMSON-227ENST00000642114 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
SAMMSON-227ENST00000642114 EVX2Q03828 476 aa12.08□□□□□ -0.48
SAMMSON-227ENST00000642114 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
SAMMSON-227ENST00000642114 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
SAMMSON-227ENST00000642114 NACADO15069 1562 aa11.99□□□□□ -0.49
SAMMSON-227ENST00000642114 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
SAMMSON-227ENST00000642114 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
SAMMSON-227ENST00000642114 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
SAMMSON-227ENST00000642114 GABBR2O75899 941 aa11.85□□□□□ -0.51
SAMMSON-227ENST00000642114 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
SAMMSON-227ENST00000642114 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
SAMMSON-227ENST00000642114 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
SAMMSON-227ENST00000642114 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
SAMMSON-227ENST00000642114 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
SAMMSON-227ENST00000642114 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
SAMMSON-227ENST00000642114 CLCN6P51797 869 aa11.69□□□□□ -0.54
SAMMSON-227ENST00000642114 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
SAMMSON-227ENST00000642114 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
SAMMSON-227ENST00000642114 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
SAMMSON-227ENST00000642114 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
SAMMSON-227ENST00000642114 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
SAMMSON-227ENST00000642114 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
SAMMSON-227ENST00000642114 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
SAMMSON-227ENST00000642114 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
SAMMSON-227ENST00000642114 LHX8Q68G74 356 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms