RNA–Protein interactions for RNA: ENST00000641709.1

PNPO-215, Transcript of pyridoxamine 5'-phosphate oxidase, humanhuman

Gene PNPO, Length 3,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPO-215ENST00000641709 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
PNPO-215ENST00000641709 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
PNPO-215ENST00000641709 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
PNPO-215ENST00000641709 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
PNPO-215ENST00000641709 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
PNPO-215ENST00000641709 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
PNPO-215ENST00000641709 ABCC9O60706 1549 aa23.46■■□□□ 1.35
PNPO-215ENST00000641709 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
PNPO-215ENST00000641709 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
PNPO-215ENST00000641709 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
PNPO-215ENST00000641709 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
PNPO-215ENST00000641709 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
PNPO-215ENST00000641709 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
PNPO-215ENST00000641709 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
PNPO-215ENST00000641709 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
PNPO-215ENST00000641709 NACADO15069 1562 aa22.73■■□□□ 1.23
PNPO-215ENST00000641709 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
PNPO-215ENST00000641709 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
PNPO-215ENST00000641709 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.22
PNPO-215ENST00000641709 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
PNPO-215ENST00000641709 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
PNPO-215ENST00000641709 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
PNPO-215ENST00000641709 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
PNPO-215ENST00000641709 WIZO95785 1651 aa22.34■■□□□ 1.17
PNPO-215ENST00000641709 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
PNPO-215ENST00000641709 BAZ1AQ9NRL2 1556 aaPredicted RBP22.14■■□□□ 1.13
PNPO-215ENST00000641709 HRCP23327 699 aa22.13■■□□□ 1.13
PNPO-215ENST00000641709 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
PNPO-215ENST00000641709 TTBK1Q5TCY1 1321 aaPredicted RBP21.97■■□□□ 1.11
PNPO-215ENST00000641709 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
PNPO-215ENST00000641709 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
PNPO-215ENST00000641709 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
PNPO-215ENST00000641709 MYT1Q01538 1121 aa21.92■■□□□ 1.1
PNPO-215ENST00000641709 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
PNPO-215ENST00000641709 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
PNPO-215ENST00000641709 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
PNPO-215ENST00000641709 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
PNPO-215ENST00000641709 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
PNPO-215ENST00000641709 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
PNPO-215ENST00000641709 SOGA1O94964 1423 aa21.7■■□□□ 1.06
PNPO-215ENST00000641709 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
PNPO-215ENST00000641709 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
PNPO-215ENST00000641709 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
PNPO-215ENST00000641709 RUSC2Q8N2Y8 1516 aa21.59■■□□□ 1.05
PNPO-215ENST00000641709 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
PNPO-215ENST00000641709 WRNQ14191 1432 aaPredicted RBP eCLIP21.54■■□□□ 1.04
PNPO-215ENST00000641709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.45■■□□□ 1.02
PNPO-215ENST00000641709 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
PNPO-215ENST00000641709 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
PNPO-215ENST00000641709 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
PNPO-215ENST00000641709 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
PNPO-215ENST00000641709 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
PNPO-215ENST00000641709 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
PNPO-215ENST00000641709 SYNJ1O43426 1573 aa21.29■■□□□ 1
PNPO-215ENST00000641709 EEA1Q15075 1411 aa21.24■□□□□ 0.99
PNPO-215ENST00000641709 GOLGA3Q08378 1498 aa21.22■□□□□ 0.99
PNPO-215ENST00000641709 APLP2Q06481 763 aa21.22■□□□□ 0.99
PNPO-215ENST00000641709 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
PNPO-215ENST00000641709 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
PNPO-215ENST00000641709 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
PNPO-215ENST00000641709 CLIP1P30622 1438 aa21.11■□□□□ 0.97
PNPO-215ENST00000641709 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
PNPO-215ENST00000641709 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
PNPO-215ENST00000641709 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
PNPO-215ENST00000641709 CUX1P39880 1505 aa20.93■□□□□ 0.94
PNPO-215ENST00000641709 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
PNPO-215ENST00000641709 CFTRP13569 1480 aa20.92■□□□□ 0.94
PNPO-215ENST00000641709 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
PNPO-215ENST00000641709 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.94
PNPO-215ENST00000641709 P3H3Q8IVL6 736 aa20.89■□□□□ 0.93
PNPO-215ENST00000641709 ITGAEP38570 1179 aa20.87■□□□□ 0.93
PNPO-215ENST00000641709 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
PNPO-215ENST00000641709 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
PNPO-215ENST00000641709 KIF21BO75037 1637 aa20.85■□□□□ 0.93
PNPO-215ENST00000641709 CUX2O14529 1486 aa20.83■□□□□ 0.93
PNPO-215ENST00000641709 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.92
PNPO-215ENST00000641709 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
PNPO-215ENST00000641709 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
PNPO-215ENST00000641709 NESP48681 1621 aa20.75■□□□□ 0.91
PNPO-215ENST00000641709 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
PNPO-215ENST00000641709 IGF1RP08069 1367 aa20.71■□□□□ 0.91
PNPO-215ENST00000641709 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
PNPO-215ENST00000641709 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
PNPO-215ENST00000641709 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
PNPO-215ENST00000641709 ARAP1Q96P48 1450 aa20.66■□□□□ 0.9
PNPO-215ENST00000641709 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
PNPO-215ENST00000641709 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
PNPO-215ENST00000641709 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.89
PNPO-215ENST00000641709 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
PNPO-215ENST00000641709 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
PNPO-215ENST00000641709 FAM50AQ14320 339 aaKnown RBP20.53■□□□□ 0.88
PNPO-215ENST00000641709 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
PNPO-215ENST00000641709 ZNF316A6NFI3 1004 aaPredicted RBP20.49■□□□□ 0.87
PNPO-215ENST00000641709 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
PNPO-215ENST00000641709 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
PNPO-215ENST00000641709 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
PNPO-215ENST00000641709 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
PNPO-215ENST00000641709 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
PNPO-215ENST00000641709 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
PNPO-215ENST00000641709 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms