RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
CASC19-230ENST00000641421 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
CASC19-230ENST00000641421 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
CASC19-230ENST00000641421 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
CASC19-230ENST00000641421 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
CASC19-230ENST00000641421 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
CASC19-230ENST00000641421 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
CASC19-230ENST00000641421 ABCC9O60706 1549 aa18.94■□□□□ 0.62
CASC19-230ENST00000641421 NACADO15069 1562 aa18.8■□□□□ 0.6
CASC19-230ENST00000641421 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
CASC19-230ENST00000641421 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CASC19-230ENST00000641421 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
CASC19-230ENST00000641421 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
CASC19-230ENST00000641421 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
CASC19-230ENST00000641421 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
CASC19-230ENST00000641421 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
CASC19-230ENST00000641421 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
CASC19-230ENST00000641421 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
CASC19-230ENST00000641421 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
CASC19-230ENST00000641421 WIZO95785 1651 aa17.96■□□□□ 0.47
CASC19-230ENST00000641421 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
CASC19-230ENST00000641421 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
CASC19-230ENST00000641421 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
CASC19-230ENST00000641421 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
CASC19-230ENST00000641421 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
CASC19-230ENST00000641421 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
CASC19-230ENST00000641421 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
CASC19-230ENST00000641421 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.4
CASC19-230ENST00000641421 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
CASC19-230ENST00000641421 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
CASC19-230ENST00000641421 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
CASC19-230ENST00000641421 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
CASC19-230ENST00000641421 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
CASC19-230ENST00000641421 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
CASC19-230ENST00000641421 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.37
CASC19-230ENST00000641421 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
CASC19-230ENST00000641421 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
CASC19-230ENST00000641421 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
CASC19-230ENST00000641421 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
CASC19-230ENST00000641421 EEA1Q15075 1411 aa17.09■□□□□ 0.33
CASC19-230ENST00000641421 SOGA1O94964 1423 aa17.09■□□□□ 0.33
CASC19-230ENST00000641421 CFTRP13569 1480 aa17.05■□□□□ 0.32
CASC19-230ENST00000641421 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
CASC19-230ENST00000641421 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
CASC19-230ENST00000641421 TOP2BQ02880 1626 aa17■□□□□ 0.31
CASC19-230ENST00000641421 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
CASC19-230ENST00000641421 PCGF6Q9BYE7 350 aa16.96■□□□□ 0.3
CASC19-230ENST00000641421 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
CASC19-230ENST00000641421 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
CASC19-230ENST00000641421 CUX1P39880 1505 aa16.9■□□□□ 0.3
CASC19-230ENST00000641421 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
CASC19-230ENST00000641421 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
CASC19-230ENST00000641421 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
CASC19-230ENST00000641421 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
CASC19-230ENST00000641421 KIF21BO75037 1637 aa16.85■□□□□ 0.29
CASC19-230ENST00000641421 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
CASC19-230ENST00000641421 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
CASC19-230ENST00000641421 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.27
CASC19-230ENST00000641421 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
CASC19-230ENST00000641421 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
CASC19-230ENST00000641421 NESP48681 1621 aa16.71■□□□□ 0.27
CASC19-230ENST00000641421 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
CASC19-230ENST00000641421 HRCP23327 699 aa16.7■□□□□ 0.26
CASC19-230ENST00000641421 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
CASC19-230ENST00000641421 ERICH3Q5RHP9 1530 aa16.68■□□□□ 0.26
CASC19-230ENST00000641421 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
CASC19-230ENST00000641421 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
CASC19-230ENST00000641421 CUX2O14529 1486 aa16.64■□□□□ 0.25
CASC19-230ENST00000641421 CLIP1P30622 1438 aa16.64■□□□□ 0.25
CASC19-230ENST00000641421 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
CASC19-230ENST00000641421 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
CASC19-230ENST00000641421 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
CASC19-230ENST00000641421 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
CASC19-230ENST00000641421 IGF1RP08069 1367 aa16.57■□□□□ 0.24
CASC19-230ENST00000641421 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
CASC19-230ENST00000641421 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
CASC19-230ENST00000641421 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
CASC19-230ENST00000641421 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
CASC19-230ENST00000641421 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
CASC19-230ENST00000641421 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
CASC19-230ENST00000641421 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
CASC19-230ENST00000641421 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
CASC19-230ENST00000641421 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
CASC19-230ENST00000641421 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
CASC19-230ENST00000641421 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
CASC19-230ENST00000641421 APLP2Q06481 763 aa16.41■□□□□ 0.22
CASC19-230ENST00000641421 CUL7Q14999 1698 aa16.37■□□□□ 0.21
CASC19-230ENST00000641421 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
CASC19-230ENST00000641421 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
CASC19-230ENST00000641421 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
CASC19-230ENST00000641421 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
CASC19-230ENST00000641421 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
CASC19-230ENST00000641421 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.21
CASC19-230ENST00000641421 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
CASC19-230ENST00000641421 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
CASC19-230ENST00000641421 WDR62O43379 1518 aa16.24■□□□□ 0.19
CASC19-230ENST00000641421 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
CASC19-230ENST00000641421 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
CASC19-230ENST00000641421 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
CASC19-230ENST00000641421 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms