RNA–Protein interactions for RNA: ENST00000641262.1

CASC19-219, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-219ENST00000641262 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
CASC19-219ENST00000641262 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CASC19-219ENST00000641262 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
CASC19-219ENST00000641262 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
CASC19-219ENST00000641262 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
CASC19-219ENST00000641262 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
CASC19-219ENST00000641262 FOXD1Q16676 465 aa16.09■□□□□ 0.17
CASC19-219ENST00000641262 ADRA2BP18089 450 aa15.8■□□□□ 0.12
CASC19-219ENST00000641262 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
CASC19-219ENST00000641262 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CASC19-219ENST00000641262 PIAS4Q8N2W9 510 aaPredicted RBP15.27■□□□□ 0.04
CASC19-219ENST00000641262 KCNA4P22459 653 aa14.91□□□□□ -0.02
CASC19-219ENST00000641262 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
CASC19-219ENST00000641262 ABCC9O60706 1549 aa14.66□□□□□ -0.06
CASC19-219ENST00000641262 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
CASC19-219ENST00000641262 MSH5O43196 834 aa14.65□□□□□ -0.06
CASC19-219ENST00000641262 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
CASC19-219ENST00000641262 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
CASC19-219ENST00000641262 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
CASC19-219ENST00000641262 NACADO15069 1562 aa14.4□□□□□ -0.1
CASC19-219ENST00000641262 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
CASC19-219ENST00000641262 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
CASC19-219ENST00000641262 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
CASC19-219ENST00000641262 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
CASC19-219ENST00000641262 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
CASC19-219ENST00000641262 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
CASC19-219ENST00000641262 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
CASC19-219ENST00000641262 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
CASC19-219ENST00000641262 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
CASC19-219ENST00000641262 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
CASC19-219ENST00000641262 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
CASC19-219ENST00000641262 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
CASC19-219ENST00000641262 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
CASC19-219ENST00000641262 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
CASC19-219ENST00000641262 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
CASC19-219ENST00000641262 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
CASC19-219ENST00000641262 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
CASC19-219ENST00000641262 ZBTB22O15209 634 aa13.73□□□□□ -0.21
CASC19-219ENST00000641262 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
CASC19-219ENST00000641262 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
CASC19-219ENST00000641262 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
CASC19-219ENST00000641262 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
CASC19-219ENST00000641262 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
CASC19-219ENST00000641262 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
CASC19-219ENST00000641262 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
CASC19-219ENST00000641262 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
CASC19-219ENST00000641262 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
CASC19-219ENST00000641262 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
CASC19-219ENST00000641262 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
CASC19-219ENST00000641262 WIZO95785 1651 aa13.36□□□□□ -0.27
CASC19-219ENST00000641262 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
CASC19-219ENST00000641262 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
CASC19-219ENST00000641262 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
CASC19-219ENST00000641262 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
CASC19-219ENST00000641262 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
CASC19-219ENST00000641262 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
CASC19-219ENST00000641262 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
CASC19-219ENST00000641262 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
CASC19-219ENST00000641262 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
CASC19-219ENST00000641262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.3
CASC19-219ENST00000641262 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
CASC19-219ENST00000641262 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
CASC19-219ENST00000641262 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
CASC19-219ENST00000641262 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
CASC19-219ENST00000641262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
CASC19-219ENST00000641262 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
CASC19-219ENST00000641262 CFTRP13569 1480 aa12.89□□□□□ -0.35
CASC19-219ENST00000641262 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
CASC19-219ENST00000641262 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
CASC19-219ENST00000641262 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
CASC19-219ENST00000641262 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
CASC19-219ENST00000641262 NESP48681 1621 aa12.8□□□□□ -0.36
CASC19-219ENST00000641262 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
CASC19-219ENST00000641262 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
CASC19-219ENST00000641262 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
CASC19-219ENST00000641262 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
CASC19-219ENST00000641262 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
CASC19-219ENST00000641262 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
CASC19-219ENST00000641262 APLP2Q06481 763 aa12.68□□□□□ -0.38
CASC19-219ENST00000641262 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
CASC19-219ENST00000641262 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
CASC19-219ENST00000641262 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
CASC19-219ENST00000641262 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
CASC19-219ENST00000641262 CUX1P39880 1505 aa12.62□□□□□ -0.39
CASC19-219ENST00000641262 DNMBPQ6XZF7 1577 aa12.62□□□□□ -0.39
CASC19-219ENST00000641262 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
CASC19-219ENST00000641262 FKBP8Q14318 412 aa12.61□□□□□ -0.39
CASC19-219ENST00000641262 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
CASC19-219ENST00000641262 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
CASC19-219ENST00000641262 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
CASC19-219ENST00000641262 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
CASC19-219ENST00000641262 URB2Q14146 1524 aaKnown RBP12.58□□□□□ -0.4
CASC19-219ENST00000641262 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
CASC19-219ENST00000641262 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
CASC19-219ENST00000641262 WDR62O43379 1518 aa12.57□□□□□ -0.4
CASC19-219ENST00000641262 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
CASC19-219ENST00000641262 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
CASC19-219ENST00000641262 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
CASC19-219ENST00000641262 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
CASC19-219ENST00000641262 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms