RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
SPIN3-237ENST00000640187 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
SPIN3-237ENST00000640187 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
SPIN3-237ENST00000640187 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
SPIN3-237ENST00000640187 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
SPIN3-237ENST00000640187 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
SPIN3-237ENST00000640187 ABCC9O60706 1549 aa23.2■■□□□ 1.3
SPIN3-237ENST00000640187 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
SPIN3-237ENST00000640187 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
SPIN3-237ENST00000640187 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
SPIN3-237ENST00000640187 NACADO15069 1562 aa22.78■■□□□ 1.24
SPIN3-237ENST00000640187 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
SPIN3-237ENST00000640187 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
SPIN3-237ENST00000640187 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
SPIN3-237ENST00000640187 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
SPIN3-237ENST00000640187 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
SPIN3-237ENST00000640187 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
SPIN3-237ENST00000640187 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
SPIN3-237ENST00000640187 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
SPIN3-237ENST00000640187 WIZO95785 1651 aa21.96■■□□□ 1.11
SPIN3-237ENST00000640187 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
SPIN3-237ENST00000640187 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
SPIN3-237ENST00000640187 TOP2AP11388 1531 aaKnown RBP21.59■■□□□ 1.05
SPIN3-237ENST00000640187 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
SPIN3-237ENST00000640187 LOC105371045A0A1W2PR82 267 aa21.53■■□□□ 1.04
SPIN3-237ENST00000640187 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
SPIN3-237ENST00000640187 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
SPIN3-237ENST00000640187 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
SPIN3-237ENST00000640187 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
SPIN3-237ENST00000640187 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
SPIN3-237ENST00000640187 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
SPIN3-237ENST00000640187 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
SPIN3-237ENST00000640187 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
SPIN3-237ENST00000640187 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
SPIN3-237ENST00000640187 NCAPD3P42695 1498 aa21.1■□□□□ 0.97
SPIN3-237ENST00000640187 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
SPIN3-237ENST00000640187 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
SPIN3-237ENST00000640187 SOGA1O94964 1423 aa20.95■□□□□ 0.94
SPIN3-237ENST00000640187 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.94
SPIN3-237ENST00000640187 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
SPIN3-237ENST00000640187 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
SPIN3-237ENST00000640187 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
SPIN3-237ENST00000640187 HRCP23327 699 aa20.81■□□□□ 0.92
SPIN3-237ENST00000640187 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
SPIN3-237ENST00000640187 CFTRP13569 1480 aa20.76■□□□□ 0.91
SPIN3-237ENST00000640187 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SPIN3-237ENST00000640187 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
SPIN3-237ENST00000640187 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
SPIN3-237ENST00000640187 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
SPIN3-237ENST00000640187 CUX1P39880 1505 aa20.63■□□□□ 0.89
SPIN3-237ENST00000640187 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
SPIN3-237ENST00000640187 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
SPIN3-237ENST00000640187 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
SPIN3-237ENST00000640187 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
SPIN3-237ENST00000640187 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
SPIN3-237ENST00000640187 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
SPIN3-237ENST00000640187 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
SPIN3-237ENST00000640187 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
SPIN3-237ENST00000640187 NESP48681 1621 aa20.5■□□□□ 0.87
SPIN3-237ENST00000640187 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
SPIN3-237ENST00000640187 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
SPIN3-237ENST00000640187 KIF21BO75037 1637 aa20.44■□□□□ 0.86
SPIN3-237ENST00000640187 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
SPIN3-237ENST00000640187 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
SPIN3-237ENST00000640187 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
SPIN3-237ENST00000640187 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
SPIN3-237ENST00000640187 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
SPIN3-237ENST00000640187 PRXQ9BXM0 1461 aa20.33■□□□□ 0.84
SPIN3-237ENST00000640187 CUX2O14529 1486 aa20.31■□□□□ 0.84
SPIN3-237ENST00000640187 CLIP1P30622 1438 aa20.29■□□□□ 0.84
SPIN3-237ENST00000640187 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
SPIN3-237ENST00000640187 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
SPIN3-237ENST00000640187 IGF1RP08069 1367 aa20.24■□□□□ 0.83
SPIN3-237ENST00000640187 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
SPIN3-237ENST00000640187 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
SPIN3-237ENST00000640187 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
SPIN3-237ENST00000640187 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
SPIN3-237ENST00000640187 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
SPIN3-237ENST00000640187 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
SPIN3-237ENST00000640187 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
SPIN3-237ENST00000640187 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
SPIN3-237ENST00000640187 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
SPIN3-237ENST00000640187 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
SPIN3-237ENST00000640187 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
SPIN3-237ENST00000640187 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
SPIN3-237ENST00000640187 APLP2Q06481 763 aa20■□□□□ 0.79
SPIN3-237ENST00000640187 ARHGAP35Q9NRY4 1499 aa19.98■□□□□ 0.79
SPIN3-237ENST00000640187 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
SPIN3-237ENST00000640187 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
SPIN3-237ENST00000640187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
SPIN3-237ENST00000640187 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
SPIN3-237ENST00000640187 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
SPIN3-237ENST00000640187 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
SPIN3-237ENST00000640187 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.77
SPIN3-237ENST00000640187 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
SPIN3-237ENST00000640187 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
SPIN3-237ENST00000640187 CUL7Q14999 1698 aa19.85■□□□□ 0.77
SPIN3-237ENST00000640187 AQRO60306 1485 aaKnown RBP eCLIP19.83■□□□□ 0.77
SPIN3-237ENST00000640187 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.76
SPIN3-237ENST00000640187 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms