RNA–Protein interactions for RNA: ENST00000639899.1

AC116366.3-203, humanhuman

TSL 5

Gene AC116366.3, Length 8,173 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116366.3-203ENST00000639899 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
AC116366.3-203ENST00000639899 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
AC116366.3-203ENST00000639899 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
AC116366.3-203ENST00000639899 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
AC116366.3-203ENST00000639899 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
AC116366.3-203ENST00000639899 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
AC116366.3-203ENST00000639899 HRCP23327 699 aa12.55□□□□□ -0.4
AC116366.3-203ENST00000639899 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
AC116366.3-203ENST00000639899 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
AC116366.3-203ENST00000639899 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
AC116366.3-203ENST00000639899 TTBK1Q5TCY1 1321 aaPredicted RBP12.38□□□□□ -0.43
AC116366.3-203ENST00000639899 ZEB1P37275 1124 aaPredicted RBP12.37□□□□□ -0.43
AC116366.3-203ENST00000639899 CENPBP07199 599 aaPredicted RBP12.29□□□□□ -0.44
AC116366.3-203ENST00000639899 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
AC116366.3-203ENST00000639899 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
AC116366.3-203ENST00000639899 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
AC116366.3-203ENST00000639899 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
AC116366.3-203ENST00000639899 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
AC116366.3-203ENST00000639899 YTHDC1Q96MU7 727 aaKnown RBP12.18□□□□□ -0.46
AC116366.3-203ENST00000639899 MYT1Q01538 1121 aa12.12□□□□□ -0.47
AC116366.3-203ENST00000639899 APLP2Q06481 763 aa12.07□□□□□ -0.48
AC116366.3-203ENST00000639899 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
AC116366.3-203ENST00000639899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
AC116366.3-203ENST00000639899 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
AC116366.3-203ENST00000639899 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
AC116366.3-203ENST00000639899 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
AC116366.3-203ENST00000639899 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
AC116366.3-203ENST00000639899 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
AC116366.3-203ENST00000639899 NEFLP07196 543 aa11.74□□□□□ -0.53
AC116366.3-203ENST00000639899 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
AC116366.3-203ENST00000639899 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
AC116366.3-203ENST00000639899 MYO15BQ96JP2 1530 aa11.72□□□□□ -0.53
AC116366.3-203ENST00000639899 DCAF1Q9Y4B6 1507 aa11.65□□□□□ -0.54
AC116366.3-203ENST00000639899 ATP1B4Q9UN42 357 aaPredicted RBP11.63□□□□□ -0.55
AC116366.3-203ENST00000639899 NEUROD1Q13562 356 aa11.62□□□□□ -0.55
AC116366.3-203ENST00000639899 ITGAEP38570 1179 aa11.6□□□□□ -0.55
AC116366.3-203ENST00000639899 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
AC116366.3-203ENST00000639899 BCANQ96GW7 911 aa11.54□□□□□ -0.56
AC116366.3-203ENST00000639899 ZCCHC6Q5VYS8 1495 aaKnown RBP11.41□□□□□ -0.58
AC116366.3-203ENST00000639899 CCDC180Q9P1Z9 1646 aa11.4□□□□□ -0.58
AC116366.3-203ENST00000639899 CNGB1Q14028 1251 aaPredicted RBP11.37□□□□□ -0.59
AC116366.3-203ENST00000639899 MIER1Q8N108 512 aa11.33□□□□□ -0.6
AC116366.3-203ENST00000639899 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
AC116366.3-203ENST00000639899 FKBP8Q14318 412 aa11.25□□□□□ -0.61
AC116366.3-203ENST00000639899 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
AC116366.3-203ENST00000639899 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
AC116366.3-203ENST00000639899 CDK11AQ9UQ88 783 aaPredicted RBP11.24□□□□□ -0.61
AC116366.3-203ENST00000639899 ANP32CO43423 234 aa11.23□□□□□ -0.61
AC116366.3-203ENST00000639899 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
AC116366.3-203ENST00000639899 DAXXQ9UER7 740 aaPredicted RBP11.21□□□□□ -0.62
AC116366.3-203ENST00000639899 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
AC116366.3-203ENST00000639899 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
AC116366.3-203ENST00000639899 DDX10Q13206 875 aaKnown RBP11.13□□□□□ -0.63
AC116366.3-203ENST00000639899 ABCC9O60706 1549 aa11.12□□□□□ -0.63
AC116366.3-203ENST00000639899 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
AC116366.3-203ENST00000639899 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC116366.3-203ENST00000639899 ANP32EQ9BTT0 268 aa11.09□□□□□ -0.63
AC116366.3-203ENST00000639899 RSF1Q96T23 1441 aaPredicted RBP11.05□□□□□ -0.64
AC116366.3-203ENST00000639899 SUPT16HQ9Y5B9 1047 aaKnown RBP11.05□□□□□ -0.64
AC116366.3-203ENST00000639899 HNRNPUQ00839 825 aaKnown RBP eCLIP11.04□□□□□ -0.64
AC116366.3-203ENST00000639899 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
AC116366.3-203ENST00000639899 HIRIP3Q9BW71 556 aaPredicted RBP11.04□□□□□ -0.64
AC116366.3-203ENST00000639899 CEP162Q5TB80 1403 aa11.04□□□□□ -0.64
AC116366.3-203ENST00000639899 NBR1Q14596 966 aa11.02□□□□□ -0.65
AC116366.3-203ENST00000639899 P3H3Q8IVL6 736 aa11□□□□□ -0.65
AC116366.3-203ENST00000639899 ANP32AP39687 249 aaKnown RBP11□□□□□ -0.65
AC116366.3-203ENST00000639899 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
AC116366.3-203ENST00000639899 ZNF326Q5BKZ1 582 aaKnown RBP10.98□□□□□ -0.65
AC116366.3-203ENST00000639899 BCL11AQ9H165 835 aa10.96□□□□□ -0.65
AC116366.3-203ENST00000639899 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.66
AC116366.3-203ENST00000639899 CLIP1P30622 1438 aa10.94□□□□□ -0.66
AC116366.3-203ENST00000639899 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
AC116366.3-203ENST00000639899 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
AC116366.3-203ENST00000639899 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
AC116366.3-203ENST00000639899 TNIKQ9UKE5 1360 aa10.88□□□□□ -0.67
AC116366.3-203ENST00000639899 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
AC116366.3-203ENST00000639899 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
AC116366.3-203ENST00000639899 TSHZ2Q9NRE2 1034 aa10.87□□□□□ -0.67
AC116366.3-203ENST00000639899 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
AC116366.3-203ENST00000639899 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
AC116366.3-203ENST00000639899 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
AC116366.3-203ENST00000639899 RBM19Q9Y4C8 960 aaKnown RBP10.84□□□□□ -0.67
AC116366.3-203ENST00000639899 SALL2Q9Y467 1007 aaPredicted RBP10.83□□□□□ -0.68
AC116366.3-203ENST00000639899 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
AC116366.3-203ENST00000639899 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
AC116366.3-203ENST00000639899 SENP3-EIF4A1A0A087X0R7 540 aa10.81□□□□□ -0.68
AC116366.3-203ENST00000639899 SOGA1O94964 1423 aa10.81□□□□□ -0.68
AC116366.3-203ENST00000639899 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
AC116366.3-203ENST00000639899 EEA1Q15075 1411 aa10.79□□□□□ -0.68
AC116366.3-203ENST00000639899 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
AC116366.3-203ENST00000639899 CHIC2Q9UKJ5 165 aa10.78□□□□□ -0.68
AC116366.3-203ENST00000639899 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
AC116366.3-203ENST00000639899 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
AC116366.3-203ENST00000639899 KCNH8Q96L42 1107 aa10.75□□□□□ -0.69
AC116366.3-203ENST00000639899 B4GALNT3Q6L9W6 998 aa10.74□□□□□ -0.69
AC116366.3-203ENST00000639899 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
AC116366.3-203ENST00000639899 WRNQ14191 1432 aaPredicted RBP eCLIP10.73□□□□□ -0.69
AC116366.3-203ENST00000639899 TMC1Q8TDI8 760 aa10.73□□□□□ -0.69
AC116366.3-203ENST00000639899 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
AC116366.3-203ENST00000639899 CANXP27824 592 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms