RNA–Protein interactions for RNA: ENST00000639205.1

KCNMA1-254, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 8,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-254ENST00000639205 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
KCNMA1-254ENST00000639205 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
KCNMA1-254ENST00000639205 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
KCNMA1-254ENST00000639205 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
KCNMA1-254ENST00000639205 APLP2Q06481 763 aa13.48□□□□□ -0.25
KCNMA1-254ENST00000639205 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-254ENST00000639205 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
KCNMA1-254ENST00000639205 ERICH6Q7L0X2 663 aa13.28□□□□□ -0.28
KCNMA1-254ENST00000639205 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
KCNMA1-254ENST00000639205 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
KCNMA1-254ENST00000639205 CENPBP07199 599 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-254ENST00000639205 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-254ENST00000639205 MYT1Q01538 1121 aa13.03□□□□□ -0.32
KCNMA1-254ENST00000639205 NEFLP07196 543 aa12.96□□□□□ -0.34
KCNMA1-254ENST00000639205 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
KCNMA1-254ENST00000639205 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-254ENST00000639205 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
KCNMA1-254ENST00000639205 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-254ENST00000639205 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
KCNMA1-254ENST00000639205 RANGAP1P46060 587 aaPredicted RBP12.71□□□□□ -0.37
KCNMA1-254ENST00000639205 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
KCNMA1-254ENST00000639205 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-254ENST00000639205 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
KCNMA1-254ENST00000639205 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
KCNMA1-254ENST00000639205 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
KCNMA1-254ENST00000639205 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
KCNMA1-254ENST00000639205 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
KCNMA1-254ENST00000639205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
KCNMA1-254ENST00000639205 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-254ENST00000639205 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
KCNMA1-254ENST00000639205 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-254ENST00000639205 ITGAEP38570 1179 aa12.24□□□□□ -0.45
KCNMA1-254ENST00000639205 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
KCNMA1-254ENST00000639205 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
KCNMA1-254ENST00000639205 HRCP23327 699 aa12.18□□□□□ -0.46
KCNMA1-254ENST00000639205 CHIC1Q5VXU3 224 aa12.15□□□□□ -0.46
KCNMA1-254ENST00000639205 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-254ENST00000639205 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
KCNMA1-254ENST00000639205 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
KCNMA1-254ENST00000639205 NEFMP07197 916 aa12□□□□□ -0.49
KCNMA1-254ENST00000639205 FAM50AQ14320 339 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-254ENST00000639205 ANP32CO43423 234 aa11.96□□□□□ -0.49
KCNMA1-254ENST00000639205 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
KCNMA1-254ENST00000639205 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-254ENST00000639205 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
KCNMA1-254ENST00000639205 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-254ENST00000639205 ANP32AP39687 249 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-254ENST00000639205 LOC105371045A0A1W2PR82 267 aa11.87□□□□□ -0.51
KCNMA1-254ENST00000639205 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
KCNMA1-254ENST00000639205 BCANQ96GW7 911 aa11.81□□□□□ -0.52
KCNMA1-254ENST00000639205 HSP90AA1P07900 732 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-254ENST00000639205 ZNF326Q5BKZ1 582 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-254ENST00000639205 UPF2Q9HAU5 1272 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-254ENST00000639205 BCL11AQ9H165 835 aa11.77□□□□□ -0.53
KCNMA1-254ENST00000639205 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
KCNMA1-254ENST00000639205 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
KCNMA1-254ENST00000639205 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
KCNMA1-254ENST00000639205 FBLN2P98095 1184 aa11.65□□□□□ -0.54
KCNMA1-254ENST00000639205 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-254ENST00000639205 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-254ENST00000639205 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-254ENST00000639205 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
KCNMA1-254ENST00000639205 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
KCNMA1-254ENST00000639205 TONSLQ96HA7 1378 aa11.55□□□□□ -0.56
KCNMA1-254ENST00000639205 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
KCNMA1-254ENST00000639205 ABCC9O60706 1549 aa11.51□□□□□ -0.57
KCNMA1-254ENST00000639205 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-254ENST00000639205 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
KCNMA1-254ENST00000639205 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
KCNMA1-254ENST00000639205 ANP32EQ9BTT0 268 aa11.48□□□□□ -0.57
KCNMA1-254ENST00000639205 WDR43Q15061 677 aaKnown RBP eCLIP11.47□□□□□ -0.57
KCNMA1-254ENST00000639205 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
KCNMA1-254ENST00000639205 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.58
KCNMA1-254ENST00000639205 FKBP8Q14318 412 aa11.46□□□□□ -0.58
KCNMA1-254ENST00000639205 NPM1P06748 294 aaKnown RBP eCLIP11.46□□□□□ -0.58
KCNMA1-254ENST00000639205 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.58
KCNMA1-254ENST00000639205 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-254ENST00000639205 NCLP19338 710 aaKnown RBP11.43□□□□□ -0.58
KCNMA1-254ENST00000639205 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
KCNMA1-254ENST00000639205 BECN1Q14457 450 aa11.43□□□□□ -0.58
KCNMA1-254ENST00000639205 TRIM44Q96DX7 344 aaPredicted RBP11.42□□□□□ -0.58
KCNMA1-254ENST00000639205 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
KCNMA1-254ENST00000639205 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
KCNMA1-254ENST00000639205 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
KCNMA1-254ENST00000639205 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
KCNMA1-254ENST00000639205 ZRSR1Q15695 479 aaKnown RBP11.39□□□□□ -0.59
KCNMA1-254ENST00000639205 NBR1Q14596 966 aa11.38□□□□□ -0.59
KCNMA1-254ENST00000639205 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
KCNMA1-254ENST00000639205 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
KCNMA1-254ENST00000639205 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
KCNMA1-254ENST00000639205 CASC1Q6TDU7 716 aa11.35□□□□□ -0.59
KCNMA1-254ENST00000639205 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-254ENST00000639205 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
KCNMA1-254ENST00000639205 ARXQ96QS3 562 aa11.34□□□□□ -0.59
KCNMA1-254ENST00000639205 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-254ENST00000639205 PLPPR3Q6T4P5 718 aa11.32□□□□□ -0.6
KCNMA1-254ENST00000639205 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
KCNMA1-254ENST00000639205 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
KCNMA1-254ENST00000639205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.6
KCNMA1-254ENST00000639205 A0A0G2JS52 829 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms