RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
PAX6-245ENST00000638914 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
PAX6-245ENST00000638914 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
PAX6-245ENST00000638914 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
PAX6-245ENST00000638914 APLP2Q06481 763 aa18.74■□□□□ 0.59
PAX6-245ENST00000638914 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
PAX6-245ENST00000638914 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
PAX6-245ENST00000638914 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
PAX6-245ENST00000638914 ATP1B4Q9UN42 357 aaPredicted RBP18■□□□□ 0.47
PAX6-245ENST00000638914 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
PAX6-245ENST00000638914 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
PAX6-245ENST00000638914 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
PAX6-245ENST00000638914 TTBK1Q5TCY1 1321 aaPredicted RBP17.7■□□□□ 0.42
PAX6-245ENST00000638914 MYT1LQ9UL68 1186 aa17.68■□□□□ 0.42
PAX6-245ENST00000638914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
PAX6-245ENST00000638914 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
PAX6-245ENST00000638914 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
PAX6-245ENST00000638914 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
PAX6-245ENST00000638914 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
PAX6-245ENST00000638914 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
PAX6-245ENST00000638914 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
PAX6-245ENST00000638914 NEFLP07196 543 aa17.27■□□□□ 0.35
PAX6-245ENST00000638914 ABCC9O60706 1549 aa17.09■□□□□ 0.33
PAX6-245ENST00000638914 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
PAX6-245ENST00000638914 ITGAEP38570 1179 aa17.05■□□□□ 0.32
PAX6-245ENST00000638914 POLR3GLQ9BT43 218 aa17.02■□□□□ 0.31
PAX6-245ENST00000638914 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
PAX6-245ENST00000638914 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
PAX6-245ENST00000638914 FBLN2P98095 1184 aa16.92■□□□□ 0.3
PAX6-245ENST00000638914 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
PAX6-245ENST00000638914 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
PAX6-245ENST00000638914 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
PAX6-245ENST00000638914 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
PAX6-245ENST00000638914 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
PAX6-245ENST00000638914 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
PAX6-245ENST00000638914 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
PAX6-245ENST00000638914 BCANQ96GW7 911 aa16.7■□□□□ 0.26
PAX6-245ENST00000638914 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
PAX6-245ENST00000638914 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
PAX6-245ENST00000638914 NEFMP07197 916 aa16.62■□□□□ 0.25
PAX6-245ENST00000638914 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
PAX6-245ENST00000638914 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
PAX6-245ENST00000638914 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
PAX6-245ENST00000638914 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
PAX6-245ENST00000638914 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
PAX6-245ENST00000638914 SLC24A1O60721 1099 aa16.46■□□□□ 0.22
PAX6-245ENST00000638914 ZNF326Q5BKZ1 582 aaKnown RBP16.43■□□□□ 0.22
PAX6-245ENST00000638914 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
PAX6-245ENST00000638914 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
PAX6-245ENST00000638914 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
PAX6-245ENST00000638914 HRCP23327 699 aa16.32■□□□□ 0.2
PAX6-245ENST00000638914 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
PAX6-245ENST00000638914 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
PAX6-245ENST00000638914 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
PAX6-245ENST00000638914 ANP32CO43423 234 aa16.26■□□□□ 0.19
PAX6-245ENST00000638914 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
PAX6-245ENST00000638914 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
PAX6-245ENST00000638914 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
PAX6-245ENST00000638914 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
PAX6-245ENST00000638914 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
PAX6-245ENST00000638914 MYT1Q01538 1121 aa16.2■□□□□ 0.18
PAX6-245ENST00000638914 TSPY4P0CV99 314 aa16.18■□□□□ 0.18
PAX6-245ENST00000638914 TSPY10P0CW01 314 aa16.18■□□□□ 0.18
PAX6-245ENST00000638914 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
PAX6-245ENST00000638914 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
PAX6-245ENST00000638914 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
PAX6-245ENST00000638914 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
PAX6-245ENST00000638914 ACIN1Q9UKV3 1341 aaKnown RBP16.03■□□□□ 0.16
PAX6-245ENST00000638914 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
PAX6-245ENST00000638914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
PAX6-245ENST00000638914 PPP1R15AO75807 674 aaPredicted RBP15.99■□□□□ 0.15
PAX6-245ENST00000638914 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
PAX6-245ENST00000638914 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
PAX6-245ENST00000638914 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
PAX6-245ENST00000638914 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
PAX6-245ENST00000638914 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
PAX6-245ENST00000638914 MTUS2Q5JR59 1369 aa15.95■□□□□ 0.14
PAX6-245ENST00000638914 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
PAX6-245ENST00000638914 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
PAX6-245ENST00000638914 A0A0G2JS52 829 aa15.91■□□□□ 0.14
PAX6-245ENST00000638914 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
PAX6-245ENST00000638914 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
PAX6-245ENST00000638914 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.13
PAX6-245ENST00000638914 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
PAX6-245ENST00000638914 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
PAX6-245ENST00000638914 CHIC2Q9UKJ5 165 aa15.81■□□□□ 0.12
PAX6-245ENST00000638914 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
PAX6-245ENST00000638914 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
PAX6-245ENST00000638914 NACADO15069 1562 aa15.79■□□□□ 0.12
PAX6-245ENST00000638914 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
PAX6-245ENST00000638914 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
PAX6-245ENST00000638914 HDGFP51858 240 aaKnown RBP15.76■□□□□ 0.11
PAX6-245ENST00000638914 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
PAX6-245ENST00000638914 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
PAX6-245ENST00000638914 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
PAX6-245ENST00000638914 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
PAX6-245ENST00000638914 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
PAX6-245ENST00000638914 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
PAX6-245ENST00000638914 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
PAX6-245ENST00000638914 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms