RNA–Protein interactions for RNA: ENST00000638506.1

KCNMA1-236, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-236ENST00000638506 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
KCNMA1-236ENST00000638506 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
KCNMA1-236ENST00000638506 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
KCNMA1-236ENST00000638506 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
KCNMA1-236ENST00000638506 ABCC9O60706 1549 aa24.72■■□□□ 1.55
KCNMA1-236ENST00000638506 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
KCNMA1-236ENST00000638506 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
KCNMA1-236ENST00000638506 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
KCNMA1-236ENST00000638506 NACADO15069 1562 aa24.05■■□□□ 1.44
KCNMA1-236ENST00000638506 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
KCNMA1-236ENST00000638506 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
KCNMA1-236ENST00000638506 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.4
KCNMA1-236ENST00000638506 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
KCNMA1-236ENST00000638506 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
KCNMA1-236ENST00000638506 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
KCNMA1-236ENST00000638506 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
KCNMA1-236ENST00000638506 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
KCNMA1-236ENST00000638506 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
KCNMA1-236ENST00000638506 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
KCNMA1-236ENST00000638506 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
KCNMA1-236ENST00000638506 WIZO95785 1651 aa22.87■■□□□ 1.25
KCNMA1-236ENST00000638506 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
KCNMA1-236ENST00000638506 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.2
KCNMA1-236ENST00000638506 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
KCNMA1-236ENST00000638506 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
KCNMA1-236ENST00000638506 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
KCNMA1-236ENST00000638506 SMARCA2P51531 1590 aa22.39■■□□□ 1.17
KCNMA1-236ENST00000638506 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
KCNMA1-236ENST00000638506 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
KCNMA1-236ENST00000638506 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
KCNMA1-236ENST00000638506 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
KCNMA1-236ENST00000638506 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
KCNMA1-236ENST00000638506 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
KCNMA1-236ENST00000638506 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
KCNMA1-236ENST00000638506 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
KCNMA1-236ENST00000638506 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
KCNMA1-236ENST00000638506 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
KCNMA1-236ENST00000638506 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.11
KCNMA1-236ENST00000638506 HRCP23327 699 aa21.79■■□□□ 1.08
KCNMA1-236ENST00000638506 CFTRP13569 1480 aa21.76■■□□□ 1.07
KCNMA1-236ENST00000638506 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
KCNMA1-236ENST00000638506 NESP48681 1621 aa21.72■■□□□ 1.07
KCNMA1-236ENST00000638506 TRIM26Q12899 539 aaPredicted RBP21.71■■□□□ 1.07
KCNMA1-236ENST00000638506 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
KCNMA1-236ENST00000638506 SYNJ1O43426 1573 aa21.67■■□□□ 1.06
KCNMA1-236ENST00000638506 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
KCNMA1-236ENST00000638506 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
KCNMA1-236ENST00000638506 SOGA1O94964 1423 aa21.53■■□□□ 1.04
KCNMA1-236ENST00000638506 CUX1P39880 1505 aa21.52■■□□□ 1.04
KCNMA1-236ENST00000638506 EEA1Q15075 1411 aa21.51■■□□□ 1.03
KCNMA1-236ENST00000638506 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
KCNMA1-236ENST00000638506 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
KCNMA1-236ENST00000638506 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
KCNMA1-236ENST00000638506 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
KCNMA1-236ENST00000638506 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
KCNMA1-236ENST00000638506 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
KCNMA1-236ENST00000638506 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.02
KCNMA1-236ENST00000638506 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
KCNMA1-236ENST00000638506 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
KCNMA1-236ENST00000638506 CEP162Q5TB80 1403 aa21.31■■□□□ 1
KCNMA1-236ENST00000638506 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
KCNMA1-236ENST00000638506 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
KCNMA1-236ENST00000638506 GOLGA3Q08378 1498 aa21.29■■□□□ 1
KCNMA1-236ENST00000638506 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
KCNMA1-236ENST00000638506 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
KCNMA1-236ENST00000638506 TOPBP1Q92547 1522 aa21.27■■□□□ 1
KCNMA1-236ENST00000638506 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
KCNMA1-236ENST00000638506 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
KCNMA1-236ENST00000638506 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
KCNMA1-236ENST00000638506 KIF21BO75037 1637 aa21.19■□□□□ 0.98
KCNMA1-236ENST00000638506 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
KCNMA1-236ENST00000638506 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.98
KCNMA1-236ENST00000638506 CUX2O14529 1486 aa21.13■□□□□ 0.97
KCNMA1-236ENST00000638506 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
KCNMA1-236ENST00000638506 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
KCNMA1-236ENST00000638506 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
KCNMA1-236ENST00000638506 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
KCNMA1-236ENST00000638506 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
KCNMA1-236ENST00000638506 CLIP1P30622 1438 aa21■□□□□ 0.95
KCNMA1-236ENST00000638506 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
KCNMA1-236ENST00000638506 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
KCNMA1-236ENST00000638506 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
KCNMA1-236ENST00000638506 WDR62O43379 1518 aa20.98■□□□□ 0.95
KCNMA1-236ENST00000638506 IGF1RP08069 1367 aa20.97■□□□□ 0.95
KCNMA1-236ENST00000638506 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
KCNMA1-236ENST00000638506 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
KCNMA1-236ENST00000638506 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
KCNMA1-236ENST00000638506 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
KCNMA1-236ENST00000638506 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.94
KCNMA1-236ENST00000638506 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
KCNMA1-236ENST00000638506 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
KCNMA1-236ENST00000638506 ZNF608Q9ULD9 1512 aaPredicted RBP20.86■□□□□ 0.93
KCNMA1-236ENST00000638506 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.93
KCNMA1-236ENST00000638506 GAPVD1Q14C86 1478 aa20.84■□□□□ 0.93
KCNMA1-236ENST00000638506 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
KCNMA1-236ENST00000638506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.92
KCNMA1-236ENST00000638506 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
KCNMA1-236ENST00000638506 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
KCNMA1-236ENST00000638506 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
KCNMA1-236ENST00000638506 APLP2Q06481 763 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms