RNA–Protein interactions for RNA: ENST00000637759.1

LIN28B-203, Transcript of lin-28 homolog B, humanhuman

TSL 5 BASIC

Gene LIN28B, Length 2,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-203ENST00000637759 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
LIN28B-203ENST00000637759 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
LIN28B-203ENST00000637759 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
LIN28B-203ENST00000637759 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
LIN28B-203ENST00000637759 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
LIN28B-203ENST00000637759 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
LIN28B-203ENST00000637759 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
LIN28B-203ENST00000637759 ABCC9O60706 1549 aa23.26■■□□□ 1.31
LIN28B-203ENST00000637759 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
LIN28B-203ENST00000637759 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
LIN28B-203ENST00000637759 NACADO15069 1562 aa22.95■■□□□ 1.26
LIN28B-203ENST00000637759 RB1CC1Q8TDY2 1594 aa22.68■■□□□ 1.22
LIN28B-203ENST00000637759 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
LIN28B-203ENST00000637759 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
LIN28B-203ENST00000637759 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
LIN28B-203ENST00000637759 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
LIN28B-203ENST00000637759 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
LIN28B-203ENST00000637759 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
LIN28B-203ENST00000637759 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
LIN28B-203ENST00000637759 WIZO95785 1651 aa22.1■■□□□ 1.13
LIN28B-203ENST00000637759 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
LIN28B-203ENST00000637759 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
LIN28B-203ENST00000637759 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
LIN28B-203ENST00000637759 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
LIN28B-203ENST00000637759 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
LIN28B-203ENST00000637759 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
LIN28B-203ENST00000637759 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.06
LIN28B-203ENST00000637759 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
LIN28B-203ENST00000637759 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
LIN28B-203ENST00000637759 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
LIN28B-203ENST00000637759 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
LIN28B-203ENST00000637759 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
LIN28B-203ENST00000637759 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
LIN28B-203ENST00000637759 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
LIN28B-203ENST00000637759 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
LIN28B-203ENST00000637759 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
LIN28B-203ENST00000637759 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.98
LIN28B-203ENST00000637759 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
LIN28B-203ENST00000637759 SOGA1O94964 1423 aa21.17■□□□□ 0.98
LIN28B-203ENST00000637759 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
LIN28B-203ENST00000637759 RUSC2Q8N2Y8 1516 aa21.06■□□□□ 0.96
LIN28B-203ENST00000637759 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
LIN28B-203ENST00000637759 TRIM26Q12899 539 aaPredicted RBP21.05■□□□□ 0.96
LIN28B-203ENST00000637759 EEA1Q15075 1411 aa21.04■□□□□ 0.96
LIN28B-203ENST00000637759 HRCP23327 699 aa20.93■□□□□ 0.94
LIN28B-203ENST00000637759 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
LIN28B-203ENST00000637759 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
LIN28B-203ENST00000637759 CFTRP13569 1480 aa20.92■□□□□ 0.94
LIN28B-203ENST00000637759 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
LIN28B-203ENST00000637759 TOP2BQ02880 1626 aa20.87■□□□□ 0.93
LIN28B-203ENST00000637759 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
LIN28B-203ENST00000637759 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
LIN28B-203ENST00000637759 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
LIN28B-203ENST00000637759 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
LIN28B-203ENST00000637759 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
LIN28B-203ENST00000637759 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
LIN28B-203ENST00000637759 CUX1P39880 1505 aa20.78■□□□□ 0.92
LIN28B-203ENST00000637759 KIF21BO75037 1637 aa20.71■□□□□ 0.91
LIN28B-203ENST00000637759 RAPGEF2Q9Y4G8 1499 aa20.67■□□□□ 0.9
LIN28B-203ENST00000637759 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
LIN28B-203ENST00000637759 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
LIN28B-203ENST00000637759 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
LIN28B-203ENST00000637759 RANGAP1P46060 587 aaPredicted RBP20.61■□□□□ 0.89
LIN28B-203ENST00000637759 CLIP1P30622 1438 aa20.58■□□□□ 0.89
LIN28B-203ENST00000637759 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
LIN28B-203ENST00000637759 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
LIN28B-203ENST00000637759 NESP48681 1621 aa20.55■□□□□ 0.88
LIN28B-203ENST00000637759 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
LIN28B-203ENST00000637759 CUX2O14529 1486 aa20.5■□□□□ 0.87
LIN28B-203ENST00000637759 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
LIN28B-203ENST00000637759 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
LIN28B-203ENST00000637759 IGF1RP08069 1367 aa20.43■□□□□ 0.86
LIN28B-203ENST00000637759 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
LIN28B-203ENST00000637759 LAMC3Q9Y6N6 1575 aa20.4■□□□□ 0.86
LIN28B-203ENST00000637759 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
LIN28B-203ENST00000637759 APLP2Q06481 763 aa20.38■□□□□ 0.85
LIN28B-203ENST00000637759 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
LIN28B-203ENST00000637759 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
LIN28B-203ENST00000637759 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
LIN28B-203ENST00000637759 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
LIN28B-203ENST00000637759 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.85
LIN28B-203ENST00000637759 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
LIN28B-203ENST00000637759 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
LIN28B-203ENST00000637759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
LIN28B-203ENST00000637759 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
LIN28B-203ENST00000637759 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
LIN28B-203ENST00000637759 CCER1Q8TC90 406 aaPredicted RBP20.23■□□□□ 0.83
LIN28B-203ENST00000637759 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
LIN28B-203ENST00000637759 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
LIN28B-203ENST00000637759 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
LIN28B-203ENST00000637759 HNRNPUL2Q1KMD3 747 aaKnown RBP20.12■□□□□ 0.81
LIN28B-203ENST00000637759 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
LIN28B-203ENST00000637759 P3H3Q8IVL6 736 aa20.08■□□□□ 0.8
LIN28B-203ENST00000637759 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
LIN28B-203ENST00000637759 CUL7Q14999 1698 aa20.05■□□□□ 0.8
LIN28B-203ENST00000637759 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
LIN28B-203ENST00000637759 ABCA5Q8WWZ7 1642 aa20.01■□□□□ 0.79
LIN28B-203ENST00000637759 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
LIN28B-203ENST00000637759 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
LIN28B-203ENST00000637759 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms