RNA–Protein interactions for RNA: ENST00000635884.1

CHRNA7-207, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 1,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-207ENST00000635884 NISCHQ9Y2I1 1504 aa37.22■■■■□ 3.55
CHRNA7-207ENST00000635884 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
CHRNA7-207ENST00000635884 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
CHRNA7-207ENST00000635884 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
CHRNA7-207ENST00000635884 DCAF1Q9Y4B6 1507 aa30.81■■■□□ 2.52
CHRNA7-207ENST00000635884 DCAF8L2P0C7V8 631 aa30.72■■■□□ 2.51
CHRNA7-207ENST00000635884 ABCC9O60706 1549 aa30.64■■■□□ 2.49
CHRNA7-207ENST00000635884 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.47
CHRNA7-207ENST00000635884 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
CHRNA7-207ENST00000635884 NACADO15069 1562 aa30.24■■■□□ 2.43
CHRNA7-207ENST00000635884 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
CHRNA7-207ENST00000635884 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
CHRNA7-207ENST00000635884 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
CHRNA7-207ENST00000635884 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
CHRNA7-207ENST00000635884 RSF1Q96T23 1441 aaPredicted RBP29.12■■■□□ 2.25
CHRNA7-207ENST00000635884 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
CHRNA7-207ENST00000635884 CECR2Q9BXF3 1484 aa28.89■■■□□ 2.22
CHRNA7-207ENST00000635884 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
CHRNA7-207ENST00000635884 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
CHRNA7-207ENST00000635884 MROH2BQ7Z745 1585 aa28.73■■■□□ 2.19
CHRNA7-207ENST00000635884 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
CHRNA7-207ENST00000635884 WIZO95785 1651 aa28.52■■■□□ 2.16
CHRNA7-207ENST00000635884 LOC105371045A0A1W2PR82 267 aa28.43■■■□□ 2.14
CHRNA7-207ENST00000635884 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
CHRNA7-207ENST00000635884 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
CHRNA7-207ENST00000635884 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
CHRNA7-207ENST00000635884 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
CHRNA7-207ENST00000635884 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
CHRNA7-207ENST00000635884 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
CHRNA7-207ENST00000635884 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
CHRNA7-207ENST00000635884 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
CHRNA7-207ENST00000635884 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
CHRNA7-207ENST00000635884 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
CHRNA7-207ENST00000635884 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
CHRNA7-207ENST00000635884 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
CHRNA7-207ENST00000635884 HRCP23327 699 aa27.79■■■□□ 2.04
CHRNA7-207ENST00000635884 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
CHRNA7-207ENST00000635884 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
CHRNA7-207ENST00000635884 ABCC8Q09428 1581 aa27.7■■■□□ 2.02
CHRNA7-207ENST00000635884 TRIM26Q12899 539 aaPredicted RBP27.69■■■□□ 2.02
CHRNA7-207ENST00000635884 SOGA1O94964 1423 aa27.39■■□□□ 1.98
CHRNA7-207ENST00000635884 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
CHRNA7-207ENST00000635884 EEA1Q15075 1411 aa27.35■■□□□ 1.97
CHRNA7-207ENST00000635884 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
CHRNA7-207ENST00000635884 CFTRP13569 1480 aa27.28■■□□□ 1.96
CHRNA7-207ENST00000635884 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
CHRNA7-207ENST00000635884 SYNJ1O43426 1573 aa27.2■■□□□ 1.95
CHRNA7-207ENST00000635884 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
CHRNA7-207ENST00000635884 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
CHRNA7-207ENST00000635884 PRDM2Q13029 1718 aa27.15■■□□□ 1.94
CHRNA7-207ENST00000635884 PPARGC1BQ86YN6 1023 aaKnown RBP27.15■■□□□ 1.94
CHRNA7-207ENST00000635884 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
CHRNA7-207ENST00000635884 CEP162Q5TB80 1403 aa27.11■■□□□ 1.93
CHRNA7-207ENST00000635884 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
CHRNA7-207ENST00000635884 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
CHRNA7-207ENST00000635884 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
CHRNA7-207ENST00000635884 CEP164Q9UPV0 1460 aa26.98■■□□□ 1.91
CHRNA7-207ENST00000635884 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CHRNA7-207ENST00000635884 LAMC3Q9Y6N6 1575 aa26.96■■□□□ 1.91
CHRNA7-207ENST00000635884 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
CHRNA7-207ENST00000635884 KIF21BO75037 1637 aa26.92■■□□□ 1.9
CHRNA7-207ENST00000635884 NESP48681 1621 aa26.9■■□□□ 1.9
CHRNA7-207ENST00000635884 CUX1P39880 1505 aa26.87■■□□□ 1.89
CHRNA7-207ENST00000635884 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
CHRNA7-207ENST00000635884 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
CHRNA7-207ENST00000635884 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
CHRNA7-207ENST00000635884 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
CHRNA7-207ENST00000635884 CLIP1P30622 1438 aa26.72■■□□□ 1.87
CHRNA7-207ENST00000635884 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
CHRNA7-207ENST00000635884 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
CHRNA7-207ENST00000635884 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
CHRNA7-207ENST00000635884 KIF21AQ7Z4S6 1674 aa26.59■■□□□ 1.85
CHRNA7-207ENST00000635884 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
CHRNA7-207ENST00000635884 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
CHRNA7-207ENST00000635884 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
CHRNA7-207ENST00000635884 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
CHRNA7-207ENST00000635884 VPS8Q8N3P4 1428 aa26.56■■□□□ 1.84
CHRNA7-207ENST00000635884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.56■■□□□ 1.84
CHRNA7-207ENST00000635884 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
CHRNA7-207ENST00000635884 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
CHRNA7-207ENST00000635884 APLP2Q06481 763 aa26.5■■□□□ 1.83
CHRNA7-207ENST00000635884 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
CHRNA7-207ENST00000635884 CUX2O14529 1486 aa26.4■■□□□ 1.82
CHRNA7-207ENST00000635884 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
CHRNA7-207ENST00000635884 ABCA10Q8WWZ4 1543 aa26.36■■□□□ 1.81
CHRNA7-207ENST00000635884 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
CHRNA7-207ENST00000635884 IGF1RP08069 1367 aa26.33■■□□□ 1.81
CHRNA7-207ENST00000635884 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
CHRNA7-207ENST00000635884 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
CHRNA7-207ENST00000635884 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
CHRNA7-207ENST00000635884 WDR62O43379 1518 aa26.26■■□□□ 1.79
CHRNA7-207ENST00000635884 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
CHRNA7-207ENST00000635884 HNRNPUL2Q1KMD3 747 aaKnown RBP26.22■■□□□ 1.79
CHRNA7-207ENST00000635884 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
CHRNA7-207ENST00000635884 THOC2Q8NI27 1593 aaKnown RBP26.18■■□□□ 1.78
CHRNA7-207ENST00000635884 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
CHRNA7-207ENST00000635884 ABCA5Q8WWZ7 1642 aa26.15■■□□□ 1.78
CHRNA7-207ENST00000635884 KANK4Q5T7N3 995 aaPredicted RBP26.09■■□□□ 1.77
CHRNA7-207ENST00000635884 GAPVD1Q14C86 1478 aa26.08■■□□□ 1.77
CHRNA7-207ENST00000635884 IFT140Q96RY7 1462 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms