RNA–Protein interactions for RNA: ENST00000635806.1

SPTAN1-227, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-227ENST00000635806 NISCHQ9Y2I1 1504 aa8.64□□□□□ -1.03
SPTAN1-227ENST00000635806 CCDC180Q9P1Z9 1646 aa7.44□□□□□ -1.22
SPTAN1-227ENST00000635806 ZCCHC6Q5VYS8 1495 aaKnown RBP7.39□□□□□ -1.23
SPTAN1-227ENST00000635806 HRCP23327 699 aa7.34□□□□□ -1.23
SPTAN1-227ENST00000635806 DCAF1Q9Y4B6 1507 aa7.29□□□□□ -1.24
SPTAN1-227ENST00000635806 PELP1Q8IZL8 1130 aaKnown RBP7.28□□□□□ -1.24
SPTAN1-227ENST00000635806 SHROOM4Q9ULL8 1493 aa7.17□□□□□ -1.26
SPTAN1-227ENST00000635806 CHIC1Q5VXU3 224 aa7.16□□□□□ -1.26
SPTAN1-227ENST00000635806 SUPT5HO00267 1087 aaKnown RBP7.15□□□□□ -1.26
SPTAN1-227ENST00000635806 ZEB1P37275 1124 aaPredicted RBP7.15□□□□□ -1.26
SPTAN1-227ENST00000635806 MYO15BQ96JP2 1530 aa7.13□□□□□ -1.27
SPTAN1-227ENST00000635806 MYT1Q01538 1121 aa7.1□□□□□ -1.27
SPTAN1-227ENST00000635806 TRIM26Q12899 539 aaPredicted RBP7.05□□□□□ -1.28
SPTAN1-227ENST00000635806 PCGF6Q9BYE7 350 aa7.05□□□□□ -1.28
SPTAN1-227ENST00000635806 ABCC9O60706 1549 aa7.05□□□□□ -1.28
SPTAN1-227ENST00000635806 RB1CC1Q8TDY2 1594 aa6.92□□□□□ -1.3
SPTAN1-227ENST00000635806 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
SPTAN1-227ENST00000635806 RSF1Q96T23 1441 aaPredicted RBP6.84□□□□□ -1.32
SPTAN1-227ENST00000635806 CENPBP07199 599 aaPredicted RBP6.82□□□□□ -1.32
SPTAN1-227ENST00000635806 WRNQ14191 1432 aaPredicted RBP eCLIP6.78□□□□□ -1.32
SPTAN1-227ENST00000635806 TRIM41Q8WV44 630 aa6.78□□□□□ -1.32
SPTAN1-227ENST00000635806 NACADO15069 1562 aa6.78□□□□□ -1.32
SPTAN1-227ENST00000635806 LOC105371045A0A1W2PR82 267 aa6.77□□□□□ -1.33
SPTAN1-227ENST00000635806 CLSPNQ9HAW4 1339 aa6.76□□□□□ -1.33
SPTAN1-227ENST00000635806 EEA1Q15075 1411 aa6.76□□□□□ -1.33
SPTAN1-227ENST00000635806 SCAF1Q9H7N4 1312 aaKnown RBP6.76□□□□□ -1.33
SPTAN1-227ENST00000635806 ACIN1Q9UKV3 1341 aaKnown RBP6.76□□□□□ -1.33
SPTAN1-227ENST00000635806 BAZ1AQ9NRL2 1556 aaPredicted RBP6.75□□□□□ -1.33
SPTAN1-227ENST00000635806 DCAF8L2P0C7V8 631 aa6.74□□□□□ -1.33
SPTAN1-227ENST00000635806 SCRIBQ14160 1630 aa6.73□□□□□ -1.33
SPTAN1-227ENST00000635806 EIF4G1Q04637 1599 aaKnown RBP6.73□□□□□ -1.33
SPTAN1-227ENST00000635806 TTBK1Q5TCY1 1321 aaPredicted RBP6.7□□□□□ -1.34
SPTAN1-227ENST00000635806 CCER1Q8TC90 406 aaPredicted RBP6.65□□□□□ -1.34
SPTAN1-227ENST00000635806 TOP2AP11388 1531 aaKnown RBP6.65□□□□□ -1.35
SPTAN1-227ENST00000635806 DIEXFQ68CQ4 756 aaKnown RBP6.64□□□□□ -1.35
SPTAN1-227ENST00000635806 TNIKQ9UKE5 1360 aa6.64□□□□□ -1.35
SPTAN1-227ENST00000635806 MROH2BQ7Z745 1585 aa6.62□□□□□ -1.35
SPTAN1-227ENST00000635806 CEP162Q5TB80 1403 aa6.61□□□□□ -1.35
SPTAN1-227ENST00000635806 GOLGA3Q08378 1498 aa6.6□□□□□ -1.35
SPTAN1-227ENST00000635806 NEUROD1Q13562 356 aa6.6□□□□□ -1.35
SPTAN1-227ENST00000635806 ZNF316A6NFI3 1004 aaPredicted RBP6.59□□□□□ -1.35
SPTAN1-227ENST00000635806 GTF3C3Q9Y5Q9 886 aa6.59□□□□□ -1.35
SPTAN1-227ENST00000635806 WIZO95785 1651 aa6.58□□□□□ -1.36
SPTAN1-227ENST00000635806 KIF21BO75037 1637 aa6.58□□□□□ -1.36
SPTAN1-227ENST00000635806 BAZ1BQ9UIG0 1483 aaKnown RBP6.58□□□□□ -1.36
SPTAN1-227ENST00000635806 CEP164Q9UPV0 1460 aa6.56□□□□□ -1.36
SPTAN1-227ENST00000635806 CECR2Q9BXF3 1484 aa6.55□□□□□ -1.36
SPTAN1-227ENST00000635806 SMARCA4P51532 1647 aa6.55□□□□□ -1.36
SPTAN1-227ENST00000635806 SMARCA2P51531 1590 aa6.55□□□□□ -1.36
SPTAN1-227ENST00000635806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.53□□□□□ -1.36
SPTAN1-227ENST00000635806 FAM9AQ8IZU1 332 aaPredicted RBP6.53□□□□□ -1.36
SPTAN1-227ENST00000635806 PEG3Q9GZU2 1588 aa6.52□□□□□ -1.36
SPTAN1-227ENST00000635806 VPS8Q8N3P4 1428 aa6.51□□□□□ -1.37
SPTAN1-227ENST00000635806 CCDC88BA6NC98 1476 aa6.49□□□□□ -1.37
SPTAN1-227ENST00000635806 CSRNP3Q8WYN3 585 aa6.48□□□□□ -1.37
SPTAN1-227ENST00000635806 ERICH3Q5RHP9 1530 aa6.48□□□□□ -1.37
SPTAN1-227ENST00000635806 ABCC8Q09428 1581 aa6.47□□□□□ -1.37
SPTAN1-227ENST00000635806 CLIP1P30622 1438 aa6.46□□□□□ -1.38
SPTAN1-227ENST00000635806 CUX2O14529 1486 aa6.46□□□□□ -1.38
SPTAN1-227ENST00000635806 APLP2Q06481 763 aa6.43□□□□□ -1.38
SPTAN1-227ENST00000635806 SOGA1O94964 1423 aa6.42□□□□□ -1.38
SPTAN1-227ENST00000635806 UBTFP17480 764 aaKnown RBP6.4□□□□□ -1.38
SPTAN1-227ENST00000635806 RRBP1Q9P2E9 1410 aaKnown RBP6.4□□□□□ -1.39
SPTAN1-227ENST00000635806 MAP3K1Q13233 1512 aa6.4□□□□□ -1.39
SPTAN1-227ENST00000635806 TOP2BQ02880 1626 aa6.39□□□□□ -1.39
SPTAN1-227ENST00000635806 BIVM-ERCC5R4GMW8 1640 aa6.39□□□□□ -1.39
SPTAN1-227ENST00000635806 MIER1Q8N108 512 aa6.38□□□□□ -1.39
SPTAN1-227ENST00000635806 SYNJ1O43426 1573 aa6.38□□□□□ -1.39
SPTAN1-227ENST00000635806 DHX57Q6P158 1386 aaKnown RBP6.37□□□□□ -1.39
SPTAN1-227ENST00000635806 ANP32EQ9BTT0 268 aa6.37□□□□□ -1.39
SPTAN1-227ENST00000635806 MYT1LQ9UL68 1186 aa6.37□□□□□ -1.39
SPTAN1-227ENST00000635806 TIMELESSQ9UNS1 1208 aa6.36□□□□□ -1.39
SPTAN1-227ENST00000635806 UNC13AQ9UPW8 1703 aa6.36□□□□□ -1.39
SPTAN1-227ENST00000635806 SUPT16HQ9Y5B9 1047 aaKnown RBP6.35□□□□□ -1.39
SPTAN1-227ENST00000635806 PRXQ9BXM0 1461 aa6.34□□□□□ -1.39
SPTAN1-227ENST00000635806 YTHDC1Q96MU7 727 aaKnown RBP6.34□□□□□ -1.39
SPTAN1-227ENST00000635806 RUSC2Q8N2Y8 1516 aa6.33□□□□□ -1.4
SPTAN1-227ENST00000635806 EHMT2Q96KQ7 1210 aa6.32□□□□□ -1.4
SPTAN1-227ENST00000635806 RAPGEF2Q9Y4G8 1499 aa6.32□□□□□ -1.4
SPTAN1-227ENST00000635806 ARAP1Q96P48 1450 aa6.31□□□□□ -1.4
SPTAN1-227ENST00000635806 NEFLP07196 543 aa6.31□□□□□ -1.4
SPTAN1-227ENST00000635806 CCNB3Q8WWL7 1395 aa6.31□□□□□ -1.4
SPTAN1-227ENST00000635806 HMGXB3Q12766 1538 aa6.3□□□□□ -1.4
SPTAN1-227ENST00000635806 ATAD2BQ9ULI0 1458 aa6.29□□□□□ -1.4
SPTAN1-227ENST00000635806 CCER2I3L3R5 266 aa6.29□□□□□ -1.4
SPTAN1-227ENST00000635806 HNRNPUL2Q1KMD3 747 aaKnown RBP6.29□□□□□ -1.4
SPTAN1-227ENST00000635806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.29□□□□□ -1.4
SPTAN1-227ENST00000635806 KIF27Q86VH2 1401 aa6.28□□□□□ -1.4
SPTAN1-227ENST00000635806 ERICH6BQ5W0A0 696 aa6.28□□□□□ -1.4
SPTAN1-227ENST00000635806 TSHZ2Q9NRE2 1034 aa6.28□□□□□ -1.4
SPTAN1-227ENST00000635806 BICRAQ9NZM4 1560 aa6.27□□□□□ -1.41
SPTAN1-227ENST00000635806 CFAP43Q8NDM7 1665 aa6.27□□□□□ -1.41
SPTAN1-227ENST00000635806 FHAD1B1AJZ9 1412 aa6.27□□□□□ -1.41
SPTAN1-227ENST00000635806 TIAM1Q13009 1591 aa6.27□□□□□ -1.41
SPTAN1-227ENST00000635806 PRDM2Q13029 1718 aa6.26□□□□□ -1.41
SPTAN1-227ENST00000635806 MAPKBP1O60336 1514 aa6.25□□□□□ -1.41
SPTAN1-227ENST00000635806 EFCAB5A4FU69 1503 aa6.24□□□□□ -1.41
SPTAN1-227ENST00000635806 SETD5Q9C0A6 1442 aa6.24□□□□□ -1.41
SPTAN1-227ENST00000635806 FANCIQ9NVI1 1328 aa6.23□□□□□ -1.41
SPTAN1-227ENST00000635806 AQRO60306 1485 aaKnown RBP eCLIP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms