RNA–Protein interactions for RNA: ENST00000634374.1

EFEMP1-213, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 5

Gene EFEMP1, Length 1,007 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-213ENST00000634374 AEBP2Q6ZN18 517 aaPredicted RBP33.01■■■□□ 2.87
EFEMP1-213ENST00000634374 CHIC1Q5VXU3 224 aa31.78■■■□□ 2.68
EFEMP1-213ENST00000634374 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
EFEMP1-213ENST00000634374 PHF23Q9BUL5 403 aaPredicted RBP27.9■■■□□ 2.06
EFEMP1-213ENST00000634374 FOXD1Q16676 465 aa26.13■■□□□ 1.77
EFEMP1-213ENST00000634374 PLPPR3Q6T4P5 718 aa25.59■■□□□ 1.69
EFEMP1-213ENST00000634374 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
EFEMP1-213ENST00000634374 ADRA2BP18089 450 aa24.7■■□□□ 1.54
EFEMP1-213ENST00000634374 PIAS4Q8N2W9 510 aaPredicted RBP24.49■■□□□ 1.51
EFEMP1-213ENST00000634374 MSH5O43196 834 aa24.28■■□□□ 1.48
EFEMP1-213ENST00000634374 POTEDQ86YR6 584 aa22.93■■□□□ 1.26
EFEMP1-213ENST00000634374 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
EFEMP1-213ENST00000634374 MAPK8IP2Q13387 824 aaPredicted RBP22.55■■□□□ 1.2
EFEMP1-213ENST00000634374 PPP4R3CPQ6ZMV5 832 aa22.48■■□□□ 1.19
EFEMP1-213ENST00000634374 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
EFEMP1-213ENST00000634374 CNKSR2Q8WXI2 1034 aa21.97■■□□□ 1.11
EFEMP1-213ENST00000634374 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
EFEMP1-213ENST00000634374 HOXD11P31277 338 aaPredicted RBP21.72■■□□□ 1.07
EFEMP1-213ENST00000634374 RNF216Q9NWF9 866 aaPredicted RBP21.67■■□□□ 1.06
EFEMP1-213ENST00000634374 NPM3O75607 178 aaKnown RBP21.44■■□□□ 1.02
EFEMP1-213ENST00000634374 KCNA4P22459 653 aa21.41■■□□□ 1.02
EFEMP1-213ENST00000634374 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1.01
EFEMP1-213ENST00000634374 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
EFEMP1-213ENST00000634374 RNF39Q9H2S5 420 aa20.77■□□□□ 0.92
EFEMP1-213ENST00000634374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
EFEMP1-213ENST00000634374 CACNB1Q02641 598 aaPredicted RBP20.52■□□□□ 0.88
EFEMP1-213ENST00000634374 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
EFEMP1-213ENST00000634374 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
EFEMP1-213ENST00000634374 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
EFEMP1-213ENST00000634374 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
EFEMP1-213ENST00000634374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
EFEMP1-213ENST00000634374 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
EFEMP1-213ENST00000634374 SPINK5Q9NQ38 1064 aaPredicted RBP19.85■□□□□ 0.77
EFEMP1-213ENST00000634374 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
EFEMP1-213ENST00000634374 MYCNP04198 464 aaPredicted RBP19.82■□□□□ 0.76
EFEMP1-213ENST00000634374 APLP2Q06481 763 aa19.77■□□□□ 0.76
EFEMP1-213ENST00000634374 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.76
EFEMP1-213ENST00000634374 CAPN15O75808 1086 aa19.76■□□□□ 0.75
EFEMP1-213ENST00000634374 ZBTB22O15209 634 aa19.71■□□□□ 0.75
EFEMP1-213ENST00000634374 DSG3P32926 999 aa19.59■□□□□ 0.73
EFEMP1-213ENST00000634374 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
EFEMP1-213ENST00000634374 TRHP20396 242 aaPredicted RBP19.55■□□□□ 0.72
EFEMP1-213ENST00000634374 ABCB7O75027 752 aa19.33■□□□□ 0.68
EFEMP1-213ENST00000634374 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
EFEMP1-213ENST00000634374 ATXN8OSP0DMR3 200 aa19.24■□□□□ 0.67
EFEMP1-213ENST00000634374 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
EFEMP1-213ENST00000634374 POLA2Q14181 598 aa19.16■□□□□ 0.66
EFEMP1-213ENST00000634374 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
EFEMP1-213ENST00000634374 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
EFEMP1-213ENST00000634374 RBM42Q9BTD8 480 aaKnown RBP18.67■□□□□ 0.58
EFEMP1-213ENST00000634374 FBLN2P98095 1184 aa18.53■□□□□ 0.56
EFEMP1-213ENST00000634374 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
EFEMP1-213ENST00000634374 MKRN4PQ13434 485 aaPredicted RBP18.47■□□□□ 0.55
EFEMP1-213ENST00000634374 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
EFEMP1-213ENST00000634374 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
EFEMP1-213ENST00000634374 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
EFEMP1-213ENST00000634374 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.52
EFEMP1-213ENST00000634374 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
EFEMP1-213ENST00000634374 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
EFEMP1-213ENST00000634374 SSUH2Q9Y2M2 353 aa18.09■□□□□ 0.49
EFEMP1-213ENST00000634374 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
EFEMP1-213ENST00000634374 POTEHQ6S545 545 aa18.05■□□□□ 0.48
EFEMP1-213ENST00000634374 PITPNM1O00562 1244 aa17.96■□□□□ 0.47
EFEMP1-213ENST00000634374 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
EFEMP1-213ENST00000634374 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
EFEMP1-213ENST00000634374 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
EFEMP1-213ENST00000634374 PIP4P2Q8N4L2 257 aa17.75■□□□□ 0.43
EFEMP1-213ENST00000634374 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.43
EFEMP1-213ENST00000634374 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
EFEMP1-213ENST00000634374 PRR29P0C7W0 189 aa17.54■□□□□ 0.4
EFEMP1-213ENST00000634374 PROM2Q8N271 834 aa17.5■□□□□ 0.39
EFEMP1-213ENST00000634374 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
EFEMP1-213ENST00000634374 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
EFEMP1-213ENST00000634374 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
EFEMP1-213ENST00000634374 FKBP8Q14318 412 aa17.35■□□□□ 0.37
EFEMP1-213ENST00000634374 HAX1O00165 279 aa17.28■□□□□ 0.36
EFEMP1-213ENST00000634374 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
EFEMP1-213ENST00000634374 FARP1Q9Y4F1 1045 aaPredicted RBP17.19■□□□□ 0.34
EFEMP1-213ENST00000634374 C19orf67A6NJJ6 358 aa17.15■□□□□ 0.34
EFEMP1-213ENST00000634374 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
EFEMP1-213ENST00000634374 EVX2Q03828 476 aa17.13■□□□□ 0.33
EFEMP1-213ENST00000634374 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.32
EFEMP1-213ENST00000634374 CD44P16070 742 aaKnown RBP16.96■□□□□ 0.31
EFEMP1-213ENST00000634374 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
EFEMP1-213ENST00000634374 MIER1Q8N108 512 aa16.92■□□□□ 0.3
EFEMP1-213ENST00000634374 FBXO3Q9UK99 471 aa16.9■□□□□ 0.3
EFEMP1-213ENST00000634374 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
EFEMP1-213ENST00000634374 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
EFEMP1-213ENST00000634374 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
EFEMP1-213ENST00000634374 GABBR2O75899 941 aa16.77■□□□□ 0.28
EFEMP1-213ENST00000634374 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
EFEMP1-213ENST00000634374 PAK3O75914 559 aaPredicted RBP16.74■□□□□ 0.27
EFEMP1-213ENST00000634374 CLCN6P51797 869 aa16.71■□□□□ 0.27
EFEMP1-213ENST00000634374 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
EFEMP1-213ENST00000634374 VASPP50552 380 aaPredicted RBP16.67■□□□□ 0.26
EFEMP1-213ENST00000634374 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
EFEMP1-213ENST00000634374 TSPYL2Q9H2G4 693 aaPredicted RBP16.6■□□□□ 0.25
EFEMP1-213ENST00000634374 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
EFEMP1-213ENST00000634374 NUBP1P53384 320 aa16.58■□□□□ 0.24
EFEMP1-213ENST00000634374 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms