RNA–Protein interactions for RNA: ENST00000633708.1

STX3-207, Transcript of syntaxin 3, humanhuman

TSL 5 BASIC

Gene STX3, Length 3,111 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX3-207ENST00000633708 NISCHQ9Y2I1 1504 aa29.93■■■□□ 2.38
STX3-207ENST00000633708 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
STX3-207ENST00000633708 SHROOM4Q9ULL8 1493 aa26.13■■□□□ 1.77
STX3-207ENST00000633708 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
STX3-207ENST00000633708 ABCC9O60706 1549 aa25.26■■□□□ 1.63
STX3-207ENST00000633708 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
STX3-207ENST00000633708 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
STX3-207ENST00000633708 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
STX3-207ENST00000633708 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.5
STX3-207ENST00000633708 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
STX3-207ENST00000633708 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
STX3-207ENST00000633708 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
STX3-207ENST00000633708 NACADO15069 1562 aa23.81■■□□□ 1.4
STX3-207ENST00000633708 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
STX3-207ENST00000633708 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
STX3-207ENST00000633708 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
STX3-207ENST00000633708 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
STX3-207ENST00000633708 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
STX3-207ENST00000633708 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
STX3-207ENST00000633708 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
STX3-207ENST00000633708 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
STX3-207ENST00000633708 WIZO95785 1651 aa23.25■■□□□ 1.31
STX3-207ENST00000633708 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
STX3-207ENST00000633708 BICRAQ9NZM4 1560 aa23.13■■□□□ 1.29
STX3-207ENST00000633708 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
STX3-207ENST00000633708 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
STX3-207ENST00000633708 RANGAP1P46060 587 aaPredicted RBP22.85■■□□□ 1.25
STX3-207ENST00000633708 DNAJC5BQ9UF47 199 aa22.83■■□□□ 1.24
STX3-207ENST00000633708 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
STX3-207ENST00000633708 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
STX3-207ENST00000633708 TTBK1Q5TCY1 1321 aaPredicted RBP22.76■■□□□ 1.23
STX3-207ENST00000633708 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
STX3-207ENST00000633708 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
STX3-207ENST00000633708 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
STX3-207ENST00000633708 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.2
STX3-207ENST00000633708 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
STX3-207ENST00000633708 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
STX3-207ENST00000633708 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
STX3-207ENST00000633708 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
STX3-207ENST00000633708 SOGA1O94964 1423 aa22.41■■□□□ 1.18
STX3-207ENST00000633708 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
STX3-207ENST00000633708 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
STX3-207ENST00000633708 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
STX3-207ENST00000633708 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
STX3-207ENST00000633708 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
STX3-207ENST00000633708 NESP48681 1621 aa22.18■■□□□ 1.14
STX3-207ENST00000633708 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
STX3-207ENST00000633708 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
STX3-207ENST00000633708 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
STX3-207ENST00000633708 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
STX3-207ENST00000633708 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
STX3-207ENST00000633708 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
STX3-207ENST00000633708 CFTRP13569 1480 aa21.88■■□□□ 1.09
STX3-207ENST00000633708 CUX1P39880 1505 aa21.81■■□□□ 1.08
STX3-207ENST00000633708 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
STX3-207ENST00000633708 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
STX3-207ENST00000633708 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
STX3-207ENST00000633708 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
STX3-207ENST00000633708 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.08
STX3-207ENST00000633708 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
STX3-207ENST00000633708 CUX2O14529 1486 aa21.75■■□□□ 1.07
STX3-207ENST00000633708 FBLN2P98095 1184 aa21.72■■□□□ 1.07
STX3-207ENST00000633708 ARID3CA6NKF2 412 aa21.71■■□□□ 1.07
STX3-207ENST00000633708 APLP2Q06481 763 aa21.67■■□□□ 1.06
STX3-207ENST00000633708 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
STX3-207ENST00000633708 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.05
STX3-207ENST00000633708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
STX3-207ENST00000633708 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
STX3-207ENST00000633708 GOLGA3Q08378 1498 aa21.61■■□□□ 1.05
STX3-207ENST00000633708 ITGAEP38570 1179 aa21.6■■□□□ 1.05
STX3-207ENST00000633708 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
STX3-207ENST00000633708 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
STX3-207ENST00000633708 CLIP1P30622 1438 aa21.57■■□□□ 1.04
STX3-207ENST00000633708 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
STX3-207ENST00000633708 IGF1RP08069 1367 aa21.54■■□□□ 1.04
STX3-207ENST00000633708 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
STX3-207ENST00000633708 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.03
STX3-207ENST00000633708 EEA1Q15075 1411 aa21.51■■□□□ 1.03
STX3-207ENST00000633708 CARMIL1Q5VZK9 1371 aa21.51■■□□□ 1.03
STX3-207ENST00000633708 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
STX3-207ENST00000633708 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
STX3-207ENST00000633708 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
STX3-207ENST00000633708 HRCP23327 699 aa21.47■■□□□ 1.03
STX3-207ENST00000633708 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.03
STX3-207ENST00000633708 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
STX3-207ENST00000633708 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
STX3-207ENST00000633708 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
STX3-207ENST00000633708 PRXQ9BXM0 1461 aa21.31■■□□□ 1
STX3-207ENST00000633708 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
STX3-207ENST00000633708 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
STX3-207ENST00000633708 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
STX3-207ENST00000633708 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
STX3-207ENST00000633708 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
STX3-207ENST00000633708 ARAP1Q96P48 1450 aa21.22■□□□□ 0.99
STX3-207ENST00000633708 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
STX3-207ENST00000633708 FHOD3Q2V2M9 1422 aa21.21■□□□□ 0.99
STX3-207ENST00000633708 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
STX3-207ENST00000633708 KIF21BO75037 1637 aa21.18■□□□□ 0.98
STX3-207ENST00000633708 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
STX3-207ENST00000633708 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms