RNA–Protein interactions for RNA: ENST00000632331.1

LINC01090-203, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 466 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-203ENST00000632331 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
LINC01090-203ENST00000632331 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
LINC01090-203ENST00000632331 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
LINC01090-203ENST00000632331 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
LINC01090-203ENST00000632331 FOXD1Q16676 465 aa18.47■□□□□ 0.55
LINC01090-203ENST00000632331 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
LINC01090-203ENST00000632331 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
LINC01090-203ENST00000632331 ADRA2BP18089 450 aa17.39■□□□□ 0.37
LINC01090-203ENST00000632331 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
LINC01090-203ENST00000632331 MSH5O43196 834 aa17.24■□□□□ 0.35
LINC01090-203ENST00000632331 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
LINC01090-203ENST00000632331 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
LINC01090-203ENST00000632331 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
LINC01090-203ENST00000632331 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
LINC01090-203ENST00000632331 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
LINC01090-203ENST00000632331 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
LINC01090-203ENST00000632331 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
LINC01090-203ENST00000632331 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
LINC01090-203ENST00000632331 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
LINC01090-203ENST00000632331 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
LINC01090-203ENST00000632331 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
LINC01090-203ENST00000632331 KCNA4P22459 653 aa14.79□□□□□ -0.04
LINC01090-203ENST00000632331 CACNB1Q02641 598 aaPredicted RBP14.77□□□□□ -0.05
LINC01090-203ENST00000632331 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
LINC01090-203ENST00000632331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC01090-203ENST00000632331 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
LINC01090-203ENST00000632331 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
LINC01090-203ENST00000632331 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
LINC01090-203ENST00000632331 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
LINC01090-203ENST00000632331 CAPN15O75808 1086 aa14.06□□□□□ -0.16
LINC01090-203ENST00000632331 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
LINC01090-203ENST00000632331 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
LINC01090-203ENST00000632331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
LINC01090-203ENST00000632331 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
LINC01090-203ENST00000632331 APLP2Q06481 763 aa13.92□□□□□ -0.18
LINC01090-203ENST00000632331 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
LINC01090-203ENST00000632331 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
LINC01090-203ENST00000632331 DSG3P32926 999 aa13.83□□□□□ -0.2
LINC01090-203ENST00000632331 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
LINC01090-203ENST00000632331 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
LINC01090-203ENST00000632331 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
LINC01090-203ENST00000632331 ABCB7O75027 752 aa13.74□□□□□ -0.21
LINC01090-203ENST00000632331 ZBTB22O15209 634 aa13.57□□□□□ -0.24
LINC01090-203ENST00000632331 POLA2Q14181 598 aa13.51□□□□□ -0.25
LINC01090-203ENST00000632331 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LINC01090-203ENST00000632331 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
LINC01090-203ENST00000632331 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
LINC01090-203ENST00000632331 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
LINC01090-203ENST00000632331 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
LINC01090-203ENST00000632331 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
LINC01090-203ENST00000632331 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
LINC01090-203ENST00000632331 POTEHQ6S545 545 aa13.02□□□□□ -0.33
LINC01090-203ENST00000632331 FBLN2P98095 1184 aa13.01□□□□□ -0.33
LINC01090-203ENST00000632331 AKT1S1Q96B36 256 aa12.93□□□□□ -0.34
LINC01090-203ENST00000632331 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
LINC01090-203ENST00000632331 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
LINC01090-203ENST00000632331 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
LINC01090-203ENST00000632331 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
LINC01090-203ENST00000632331 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
LINC01090-203ENST00000632331 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
LINC01090-203ENST00000632331 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
LINC01090-203ENST00000632331 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
LINC01090-203ENST00000632331 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
LINC01090-203ENST00000632331 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
LINC01090-203ENST00000632331 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
LINC01090-203ENST00000632331 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
LINC01090-203ENST00000632331 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01090-203ENST00000632331 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01090-203ENST00000632331 HAX1O00165 279 aa12.41□□□□□ -0.42
LINC01090-203ENST00000632331 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
LINC01090-203ENST00000632331 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
LINC01090-203ENST00000632331 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
LINC01090-203ENST00000632331 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
LINC01090-203ENST00000632331 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
LINC01090-203ENST00000632331 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
LINC01090-203ENST00000632331 EVX2Q03828 476 aa12.17□□□□□ -0.46
LINC01090-203ENST00000632331 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
LINC01090-203ENST00000632331 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
LINC01090-203ENST00000632331 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
LINC01090-203ENST00000632331 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
LINC01090-203ENST00000632331 PROM2Q8N271 834 aa11.97□□□□□ -0.49
LINC01090-203ENST00000632331 FKBP8Q14318 412 aa11.95□□□□□ -0.5
LINC01090-203ENST00000632331 GABBR2O75899 941 aa11.92□□□□□ -0.5
LINC01090-203ENST00000632331 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01090-203ENST00000632331 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
LINC01090-203ENST00000632331 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
LINC01090-203ENST00000632331 MIER1Q8N108 512 aa11.86□□□□□ -0.51
LINC01090-203ENST00000632331 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
LINC01090-203ENST00000632331 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
LINC01090-203ENST00000632331 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
LINC01090-203ENST00000632331 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
LINC01090-203ENST00000632331 CLCN6P51797 869 aa11.76□□□□□ -0.53
LINC01090-203ENST00000632331 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
LINC01090-203ENST00000632331 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
LINC01090-203ENST00000632331 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
LINC01090-203ENST00000632331 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
LINC01090-203ENST00000632331 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
LINC01090-203ENST00000632331 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
LINC01090-203ENST00000632331 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
LINC01090-203ENST00000632331 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms