RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-233ENST00000630543 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
NRXN1-233ENST00000630543 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
NRXN1-233ENST00000630543 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
NRXN1-233ENST00000630543 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
NRXN1-233ENST00000630543 ABCC9O60706 1549 aa22.56■■□□□ 1.2
NRXN1-233ENST00000630543 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
NRXN1-233ENST00000630543 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
NRXN1-233ENST00000630543 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
NRXN1-233ENST00000630543 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
NRXN1-233ENST00000630543 FAM9AQ8IZU1 332 aaPredicted RBP21.86■■□□□ 1.09
NRXN1-233ENST00000630543 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
NRXN1-233ENST00000630543 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.07
NRXN1-233ENST00000630543 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
NRXN1-233ENST00000630543 DCAF1Q9Y4B6 1507 aa21.54■■□□□ 1.04
NRXN1-233ENST00000630543 NACADO15069 1562 aa21.39■■□□□ 1.02
NRXN1-233ENST00000630543 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.01
NRXN1-233ENST00000630543 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
NRXN1-233ENST00000630543 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
NRXN1-233ENST00000630543 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
NRXN1-233ENST00000630543 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
NRXN1-233ENST00000630543 RANGAP1P46060 587 aaPredicted RBP21.16■□□□□ 0.98
NRXN1-233ENST00000630543 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
NRXN1-233ENST00000630543 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
NRXN1-233ENST00000630543 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
NRXN1-233ENST00000630543 PPARGC1BQ86YN6 1023 aaKnown RBP20.99■□□□□ 0.95
NRXN1-233ENST00000630543 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
NRXN1-233ENST00000630543 APLP2Q06481 763 aa20.77■□□□□ 0.92
NRXN1-233ENST00000630543 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
NRXN1-233ENST00000630543 WIZO95785 1651 aa20.65■□□□□ 0.9
NRXN1-233ENST00000630543 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
NRXN1-233ENST00000630543 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
NRXN1-233ENST00000630543 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
NRXN1-233ENST00000630543 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
NRXN1-233ENST00000630543 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
NRXN1-233ENST00000630543 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
NRXN1-233ENST00000630543 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
NRXN1-233ENST00000630543 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
NRXN1-233ENST00000630543 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
NRXN1-233ENST00000630543 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
NRXN1-233ENST00000630543 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
NRXN1-233ENST00000630543 HRCP23327 699 aa20.28■□□□□ 0.84
NRXN1-233ENST00000630543 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
NRXN1-233ENST00000630543 HNRNPUL2Q1KMD3 747 aaKnown RBP20.2■□□□□ 0.82
NRXN1-233ENST00000630543 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
NRXN1-233ENST00000630543 SOGA1O94964 1423 aa20.19■□□□□ 0.82
NRXN1-233ENST00000630543 ITGAEP38570 1179 aa20.15■□□□□ 0.82
NRXN1-233ENST00000630543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
NRXN1-233ENST00000630543 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
NRXN1-233ENST00000630543 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
NRXN1-233ENST00000630543 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.8
NRXN1-233ENST00000630543 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
NRXN1-233ENST00000630543 CEP162Q5TB80 1403 aa19.97■□□□□ 0.79
NRXN1-233ENST00000630543 FBLN2P98095 1184 aa19.97■□□□□ 0.79
NRXN1-233ENST00000630543 EEA1Q15075 1411 aa19.95■□□□□ 0.78
NRXN1-233ENST00000630543 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
NRXN1-233ENST00000630543 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
NRXN1-233ENST00000630543 CLIP1P30622 1438 aa19.89■□□□□ 0.77
NRXN1-233ENST00000630543 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
NRXN1-233ENST00000630543 ARID3CA6NKF2 412 aa19.86■□□□□ 0.77
NRXN1-233ENST00000630543 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
NRXN1-233ENST00000630543 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
NRXN1-233ENST00000630543 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
NRXN1-233ENST00000630543 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
NRXN1-233ENST00000630543 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
NRXN1-233ENST00000630543 CUX2O14529 1486 aa19.78■□□□□ 0.76
NRXN1-233ENST00000630543 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
NRXN1-233ENST00000630543 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
NRXN1-233ENST00000630543 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
NRXN1-233ENST00000630543 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.74
NRXN1-233ENST00000630543 SYNJ1O43426 1573 aa19.64■□□□□ 0.73
NRXN1-233ENST00000630543 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
NRXN1-233ENST00000630543 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
NRXN1-233ENST00000630543 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
NRXN1-233ENST00000630543 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
NRXN1-233ENST00000630543 NESP48681 1621 aa19.59■□□□□ 0.73
NRXN1-233ENST00000630543 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
NRXN1-233ENST00000630543 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
NRXN1-233ENST00000630543 CFTRP13569 1480 aa19.58■□□□□ 0.72
NRXN1-233ENST00000630543 CHMP7Q8WUX9 453 aaPredicted RBP19.54■□□□□ 0.72
NRXN1-233ENST00000630543 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
NRXN1-233ENST00000630543 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
NRXN1-233ENST00000630543 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
NRXN1-233ENST00000630543 VPS8Q8N3P4 1428 aa19.45■□□□□ 0.7
NRXN1-233ENST00000630543 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
NRXN1-233ENST00000630543 CUX1P39880 1505 aa19.44■□□□□ 0.7
NRXN1-233ENST00000630543 IGF1RP08069 1367 aa19.41■□□□□ 0.7
NRXN1-233ENST00000630543 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
NRXN1-233ENST00000630543 TRIM52Q96A61 297 aa19.39■□□□□ 0.69
NRXN1-233ENST00000630543 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
NRXN1-233ENST00000630543 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
NRXN1-233ENST00000630543 MTUS2Q5JR59 1369 aa19.37■□□□□ 0.69
NRXN1-233ENST00000630543 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
NRXN1-233ENST00000630543 DIEXFQ68CQ4 756 aaKnown RBP19.32■□□□□ 0.68
NRXN1-233ENST00000630543 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
NRXN1-233ENST00000630543 FHOD3Q2V2M9 1422 aa19.27■□□□□ 0.67
NRXN1-233ENST00000630543 CDK11AQ9UQ88 783 aaPredicted RBP19.26■□□□□ 0.67
NRXN1-233ENST00000630543 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
NRXN1-233ENST00000630543 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
NRXN1-233ENST00000630543 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.66
NRXN1-233ENST00000630543 KIF21BO75037 1637 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms