RNA–Protein interactions for RNA: ENST00000629676.2

KCNQ2-218, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5 BASIC

Gene KCNQ2, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-218ENST00000629676 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
KCNQ2-218ENST00000629676 CCDC180Q9P1Z9 1646 aa35.05■■■■□ 3.2
KCNQ2-218ENST00000629676 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
KCNQ2-218ENST00000629676 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
KCNQ2-218ENST00000629676 DCAF8L2P0C7V8 631 aa33.65■■■□□ 2.98
KCNQ2-218ENST00000629676 ABCC9O60706 1549 aa33.29■■■□□ 2.92
KCNQ2-218ENST00000629676 DCAF1Q9Y4B6 1507 aa33.22■■■□□ 2.91
KCNQ2-218ENST00000629676 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
KCNQ2-218ENST00000629676 MYO15BQ96JP2 1530 aa32.72■■■□□ 2.83
KCNQ2-218ENST00000629676 NACADO15069 1562 aa32.6■■■□□ 2.81
KCNQ2-218ENST00000629676 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
KCNQ2-218ENST00000629676 RB1CC1Q8TDY2 1594 aa32.34■■■□□ 2.77
KCNQ2-218ENST00000629676 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.7
KCNQ2-218ENST00000629676 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
KCNQ2-218ENST00000629676 RSF1Q96T23 1441 aaPredicted RBP31.53■■■□□ 2.64
KCNQ2-218ENST00000629676 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
KCNQ2-218ENST00000629676 BICRAQ9NZM4 1560 aa31.48■■■□□ 2.63
KCNQ2-218ENST00000629676 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
KCNQ2-218ENST00000629676 MROH2BQ7Z745 1585 aa31.33■■■□□ 2.61
KCNQ2-218ENST00000629676 BAZ1AQ9NRL2 1556 aaPredicted RBP31.14■■■□□ 2.58
KCNQ2-218ENST00000629676 WIZO95785 1651 aa31.13■■■□□ 2.57
KCNQ2-218ENST00000629676 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
KCNQ2-218ENST00000629676 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
KCNQ2-218ENST00000629676 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
KCNQ2-218ENST00000629676 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
KCNQ2-218ENST00000629676 LOC105371045A0A1W2PR82 267 aa30.54■■■□□ 2.48
KCNQ2-218ENST00000629676 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
KCNQ2-218ENST00000629676 ATAD2BQ9ULI0 1458 aa30.49■■■□□ 2.47
KCNQ2-218ENST00000629676 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
KCNQ2-218ENST00000629676 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
KCNQ2-218ENST00000629676 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
KCNQ2-218ENST00000629676 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
KCNQ2-218ENST00000629676 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
KCNQ2-218ENST00000629676 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
KCNQ2-218ENST00000629676 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
KCNQ2-218ENST00000629676 ABCC8Q09428 1581 aa30.05■■■□□ 2.4
KCNQ2-218ENST00000629676 CC2D2AQ9P2K1 1620 aa30.05■■■□□ 2.4
KCNQ2-218ENST00000629676 PCGF6Q9BYE7 350 aa29.71■■■□□ 2.35
KCNQ2-218ENST00000629676 SOGA1O94964 1423 aa29.64■■■□□ 2.34
KCNQ2-218ENST00000629676 WRNQ14191 1432 aaPredicted RBP eCLIP29.64■■■□□ 2.34
KCNQ2-218ENST00000629676 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
KCNQ2-218ENST00000629676 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
KCNQ2-218ENST00000629676 CFTRP13569 1480 aa29.54■■■□□ 2.32
KCNQ2-218ENST00000629676 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
KCNQ2-218ENST00000629676 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
KCNQ2-218ENST00000629676 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
KCNQ2-218ENST00000629676 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
KCNQ2-218ENST00000629676 NESP48681 1621 aa29.31■■■□□ 2.28
KCNQ2-218ENST00000629676 TRIM26Q12899 539 aaPredicted RBP29.3■■■□□ 2.28
KCNQ2-218ENST00000629676 EEA1Q15075 1411 aa29.3■■■□□ 2.28
KCNQ2-218ENST00000629676 TOP2BQ02880 1626 aa29.3■■■□□ 2.28
KCNQ2-218ENST00000629676 CUX1P39880 1505 aa29.26■■■□□ 2.27
KCNQ2-218ENST00000629676 BIVM-ERCC5R4GMW8 1640 aa29.26■■■□□ 2.27
KCNQ2-218ENST00000629676 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
KCNQ2-218ENST00000629676 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
KCNQ2-218ENST00000629676 FANCD2Q9BXW9 1451 aa29.15■■■□□ 2.26
KCNQ2-218ENST00000629676 HRCP23327 699 aa29.12■■■□□ 2.25
KCNQ2-218ENST00000629676 TNIKQ9UKE5 1360 aa29.12■■■□□ 2.25
KCNQ2-218ENST00000629676 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
KCNQ2-218ENST00000629676 GOLGA3Q08378 1498 aa29.08■■■□□ 2.25
KCNQ2-218ENST00000629676 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
KCNQ2-218ENST00000629676 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
KCNQ2-218ENST00000629676 RAPGEF2Q9Y4G8 1499 aa28.93■■■□□ 2.22
KCNQ2-218ENST00000629676 KIF21BO75037 1637 aa28.92■■■□□ 2.22
KCNQ2-218ENST00000629676 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
KCNQ2-218ENST00000629676 RANGAP1P46060 587 aaPredicted RBP28.91■■■□□ 2.22
KCNQ2-218ENST00000629676 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
KCNQ2-218ENST00000629676 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
KCNQ2-218ENST00000629676 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
KCNQ2-218ENST00000629676 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
KCNQ2-218ENST00000629676 TOPBP1Q92547 1522 aa28.85■■■□□ 2.21
KCNQ2-218ENST00000629676 URB2Q14146 1524 aaKnown RBP28.81■■■□□ 2.2
KCNQ2-218ENST00000629676 KIF27Q86VH2 1401 aa28.8■■■□□ 2.2
KCNQ2-218ENST00000629676 CUX2O14529 1486 aa28.77■■■□□ 2.2
KCNQ2-218ENST00000629676 CLIP1P30622 1438 aa28.75■■■□□ 2.19
KCNQ2-218ENST00000629676 POLA1P09884 1462 aaPredicted RBP28.74■■■□□ 2.19
KCNQ2-218ENST00000629676 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
KCNQ2-218ENST00000629676 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
KCNQ2-218ENST00000629676 ERICH3Q5RHP9 1530 aa28.6■■■□□ 2.17
KCNQ2-218ENST00000629676 IGF1RP08069 1367 aa28.59■■■□□ 2.17
KCNQ2-218ENST00000629676 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
KCNQ2-218ENST00000629676 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
KCNQ2-218ENST00000629676 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
KCNQ2-218ENST00000629676 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
KCNQ2-218ENST00000629676 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
KCNQ2-218ENST00000629676 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
KCNQ2-218ENST00000629676 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
KCNQ2-218ENST00000629676 APLP2Q06481 763 aa28.4■■■□□ 2.14
KCNQ2-218ENST00000629676 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
KCNQ2-218ENST00000629676 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
KCNQ2-218ENST00000629676 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
KCNQ2-218ENST00000629676 WDR62O43379 1518 aa28.35■■■□□ 2.13
KCNQ2-218ENST00000629676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.34■■■□□ 2.13
KCNQ2-218ENST00000629676 GAPVD1Q14C86 1478 aa28.31■■■□□ 2.12
KCNQ2-218ENST00000629676 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
KCNQ2-218ENST00000629676 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.11
KCNQ2-218ENST00000629676 ZEB1P37275 1124 aaPredicted RBP28.26■■■□□ 2.11
KCNQ2-218ENST00000629676 CUL7Q14999 1698 aa28.25■■■□□ 2.11
KCNQ2-218ENST00000629676 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
KCNQ2-218ENST00000629676 CCER1Q8TC90 406 aaPredicted RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms