RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
SPTAN1-216ENST00000629047 CHIC1Q5VXU3 224 aa11.77□□□□□ -0.53
SPTAN1-216ENST00000629047 SENP3Q9H4L4 574 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-216ENST00000629047 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
SPTAN1-216ENST00000629047 FOXD1Q16676 465 aa10.25□□□□□ -0.77
SPTAN1-216ENST00000629047 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
SPTAN1-216ENST00000629047 MSH5O43196 834 aa9.59□□□□□ -0.87
SPTAN1-216ENST00000629047 PIAS4Q8N2W9 510 aaPredicted RBP9.44□□□□□ -0.9
SPTAN1-216ENST00000629047 PPP6R1Q9UPN7 881 aa9.34□□□□□ -0.91
SPTAN1-216ENST00000629047 ADRA2BP18089 450 aa9.28□□□□□ -0.92
SPTAN1-216ENST00000629047 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
SPTAN1-216ENST00000629047 MAPK8IP2Q13387 824 aaPredicted RBP8.67□□□□□ -1.02
SPTAN1-216ENST00000629047 DMRT2Q9Y5R5 561 aa8.56□□□□□ -1.04
SPTAN1-216ENST00000629047 CACNB1Q02641 598 aaPredicted RBP8.53□□□□□ -1.04
SPTAN1-216ENST00000629047 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
SPTAN1-216ENST00000629047 SCAF1Q9H7N4 1312 aaKnown RBP8.24□□□□□ -1.09
SPTAN1-216ENST00000629047 RNF39Q9H2S5 420 aa8.22□□□□□ -1.09
SPTAN1-216ENST00000629047 HOXD11P31277 338 aaPredicted RBP8.07□□□□□ -1.12
SPTAN1-216ENST00000629047 C1QBPQ07021 282 aaKnown RBP8□□□□□ -1.13
SPTAN1-216ENST00000629047 PPP4R3CPQ6ZMV5 832 aa7.99□□□□□ -1.13
SPTAN1-216ENST00000629047 RNF216Q9NWF9 866 aaPredicted RBP7.88□□□□□ -1.15
SPTAN1-216ENST00000629047 POTEHQ6S545 545 aa7.85□□□□□ -1.15
SPTAN1-216ENST00000629047 CNKSR2Q8WXI2 1034 aa7.85□□□□□ -1.15
SPTAN1-216ENST00000629047 DNAJC5BQ9UF47 199 aa7.72□□□□□ -1.17
SPTAN1-216ENST00000629047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.7□□□□□ -1.182e-7■■□□□ 12.6
SPTAN1-216ENST00000629047 SPINK5Q9NQ38 1064 aaPredicted RBP7.62□□□□□ -1.19
SPTAN1-216ENST00000629047 DSG3P32926 999 aa7.59□□□□□ -1.19
SPTAN1-216ENST00000629047 U3KPZ7 1027 aaPredicted RBP7.56□□□□□ -1.2
SPTAN1-216ENST00000629047 CAPN15O75808 1086 aa7.54□□□□□ -1.2
SPTAN1-216ENST00000629047 NPM3O75607 178 aaKnown RBP7.49□□□□□ -1.21
SPTAN1-216ENST00000629047 NCBP3Q53F19 620 aaKnown RBP7.43□□□□□ -1.22
SPTAN1-216ENST00000629047 ABCB7O75027 752 aa7.42□□□□□ -1.22
SPTAN1-216ENST00000629047 TRHP20396 242 aaPredicted RBP7.35□□□□□ -1.23
SPTAN1-216ENST00000629047 SLC4A2P04920 1241 aa7.28□□□□□ -1.24
SPTAN1-216ENST00000629047 CHRDL2Q6WN34 429 aa7.22□□□□□ -1.25
SPTAN1-216ENST00000629047 ZNF219Q9P2Y4 722 aaPredicted RBP7.2□□□□□ -1.26
SPTAN1-216ENST00000629047 SP7Q8TDD2 431 aaPredicted RBP7.16□□□□□ -1.26
SPTAN1-216ENST00000629047 RBM42Q9BTD8 480 aaKnown RBP7.12□□□□□ -1.27
SPTAN1-216ENST00000629047 APLP2Q06481 763 aa7.07□□□□□ -1.28
SPTAN1-216ENST00000629047 KCNA4P22459 653 aa7.05□□□□□ -1.28
SPTAN1-216ENST00000629047 POLA2Q14181 598 aa7.03□□□□□ -1.28
SPTAN1-216ENST00000629047 PIP4P2Q8N4L2 257 aa7.01□□□□□ -1.29
SPTAN1-216ENST00000629047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7□□□□□ -1.29
SPTAN1-216ENST00000629047 HNRNPUL2Q1KMD3 747 aaKnown RBP7□□□□□ -1.29
SPTAN1-216ENST00000629047 SAMD1Q6SPF0 538 aaPredicted RBP7□□□□□ -1.29
SPTAN1-216ENST00000629047 EVX2Q03828 476 aa6.96□□□□□ -1.3
SPTAN1-216ENST00000629047 HAX1O00165 279 aa6.94□□□□□ -1.3
SPTAN1-216ENST00000629047 REM2Q8IYK8 340 aaPredicted RBP6.93□□□□□ -1.3
SPTAN1-216ENST00000629047 AKT1S1Q96B36 256 aa6.92□□□□□ -1.3
SPTAN1-216ENST00000629047 PITPNM1O00562 1244 aa6.9□□□□□ -1.3
SPTAN1-216ENST00000629047 OSCARQ8IYS5 282 aa6.9□□□□□ -1.3
SPTAN1-216ENST00000629047 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
SPTAN1-216ENST00000629047 FXR2P51116 673 aaKnown RBP eCLIP6.86□□□□□ -1.316e-11■■□□□ 13.5
SPTAN1-216ENST00000629047 MYCNP04198 464 aaPredicted RBP6.85□□□□□ -1.31
SPTAN1-216ENST00000629047 LHX8Q68G74 356 aa6.71□□□□□ -1.34
SPTAN1-216ENST00000629047 ZBTB12Q9Y330 459 aaPredicted RBP6.71□□□□□ -1.34
SPTAN1-216ENST00000629047 GABBR2O75899 941 aa6.68□□□□□ -1.34
SPTAN1-216ENST00000629047 PRKAR2AP13861 404 aaKnown RBP6.68□□□□□ -1.34
SPTAN1-216ENST00000629047 C19orf67A6NJJ6 358 aa6.66□□□□□ -1.34
SPTAN1-216ENST00000629047 PLSCR2Q9NRY7 297 aa6.66□□□□□ -1.34
SPTAN1-216ENST00000629047 CLEC11AQ9Y240 323 aa6.62□□□□□ -1.35
SPTAN1-216ENST00000629047 POTEIP0CG38 1075 aa6.61□□□□□ -1.35
SPTAN1-216ENST00000629047 CHADLQ6NUI6 762 aa6.61□□□□□ -1.35
SPTAN1-216ENST00000629047 FOXD4L1Q9NU39 408 aa6.6□□□□□ -1.35
SPTAN1-216ENST00000629047 SPDYE2BA6NHP3 402 aa6.54□□□□□ -1.36
SPTAN1-216ENST00000629047 SPDYE6P0CI01 402 aa6.54□□□□□ -1.36
SPTAN1-216ENST00000629047 SPDYE2Q495Y8 402 aa6.54□□□□□ -1.36
SPTAN1-216ENST00000629047 ZBTB22O15209 634 aa6.53□□□□□ -1.36
SPTAN1-216ENST00000629047 MKRN4PQ13434 485 aaPredicted RBP6.53□□□□□ -1.36
SPTAN1-216ENST00000629047 SPDYE1Q8NFV5 336 aaPredicted RBP6.53□□□□□ -1.36
SPTAN1-216ENST00000629047 SLC4A1APQ9BWU0 796 aaKnown RBP6.5□□□□□ -1.37
SPTAN1-216ENST00000629047 SSUH2Q9Y2M2 353 aa6.48□□□□□ -1.37
SPTAN1-216ENST00000629047 FBLN2P98095 1184 aa6.45□□□□□ -1.38
SPTAN1-216ENST00000629047 CD44P16070 742 aaKnown RBP6.44□□□□□ -1.38
SPTAN1-216ENST00000629047 ZNF692Q9BU19 519 aaPredicted RBP6.43□□□□□ -1.38
SPTAN1-216ENST00000629047 POTEB2H3BUK9 544 aa6.4□□□□□ -1.38
SPTAN1-216ENST00000629047 OTUD5Q96G74 571 aa6.4□□□□□ -1.38
SPTAN1-216ENST00000629047 PRR29P0C7W0 189 aa6.39□□□□□ -1.39
SPTAN1-216ENST00000629047 PABPN1Q86U42 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
SPTAN1-216ENST00000629047 FARP1Q9Y4F1 1045 aaPredicted RBP6.37□□□□□ -1.39
SPTAN1-216ENST00000629047 POTEMA6NI47 508 aa6.36□□□□□ -1.39
SPTAN1-216ENST00000629047 DCBLD2Q96PD2 775 aa6.35□□□□□ -1.39
SPTAN1-216ENST00000629047 GALR2O43603 387 aaPredicted RBP6.34□□□□□ -1.39
SPTAN1-216ENST00000629047 ATXN8OSP0DMR3 200 aa6.33□□□□□ -1.4
SPTAN1-216ENST00000629047 POTEGQ6S5H5 508 aa6.33□□□□□ -1.4
SPTAN1-216ENST00000629047 ZNF579Q8NAF0 562 aaKnown RBP6.3□□□□□ -1.4
SPTAN1-216ENST00000629047 ZRANB1Q9UGI0 708 aa6.3□□□□□ -1.4
SPTAN1-216ENST00000629047 PELP1Q8IZL8 1130 aaKnown RBP6.28□□□□□ -1.4
SPTAN1-216ENST00000629047 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
SPTAN1-216ENST00000629047 PHF12Q96QT6 1004 aa6.26□□□□□ -1.41
SPTAN1-216ENST00000629047 POTEJP0CG39 1038 aa6.25□□□□□ -1.41
SPTAN1-216ENST00000629047 CREBZFQ9NS37 354 aa6.23□□□□□ -1.41
SPTAN1-216ENST00000629047 CLCN6P51797 869 aa6.19□□□□□ -1.42
SPTAN1-216ENST00000629047 METRNQ9UJH8 293 aa6.15□□□□□ -1.42
SPTAN1-216ENST00000629047 FAM163AQ96GL9 167 aaPredicted RBP6.14□□□□□ -1.43
SPTAN1-216ENST00000629047 MS4A3Q96HJ5 214 aa6.14□□□□□ -1.43
SPTAN1-216ENST00000629047 ATMINO43313 823 aaPredicted RBP6.11□□□□□ -1.43
SPTAN1-216ENST00000629047 ASTLQ6HA08 431 aaPredicted RBP6.09□□□□□ -1.43
SPTAN1-216ENST00000629047 PCDH10Q9P2E7 1040 aa6.09□□□□□ -1.43
SPTAN1-216ENST00000629047 POTEFA5A3E0 1075 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms