RNA–Protein interactions for RNA: ENST00000627241.1

RBM12B-208, Transcript of RNA binding motif protein 12B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RBM12B, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM12B-208ENST00000627241 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
RBM12B-208ENST00000627241 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
RBM12B-208ENST00000627241 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
RBM12B-208ENST00000627241 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
RBM12B-208ENST00000627241 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
RBM12B-208ENST00000627241 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
RBM12B-208ENST00000627241 ABCC9O60706 1549 aa20.43■□□□□ 0.86
RBM12B-208ENST00000627241 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
RBM12B-208ENST00000627241 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
RBM12B-208ENST00000627241 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
RBM12B-208ENST00000627241 NACADO15069 1562 aa19.88■□□□□ 0.77
RBM12B-208ENST00000627241 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
RBM12B-208ENST00000627241 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
RBM12B-208ENST00000627241 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
RBM12B-208ENST00000627241 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
RBM12B-208ENST00000627241 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
RBM12B-208ENST00000627241 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
RBM12B-208ENST00000627241 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
RBM12B-208ENST00000627241 WIZO95785 1651 aa19.42■□□□□ 0.7
RBM12B-208ENST00000627241 BICRAQ9NZM4 1560 aa19.33■□□□□ 0.69
RBM12B-208ENST00000627241 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
RBM12B-208ENST00000627241 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
RBM12B-208ENST00000627241 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
RBM12B-208ENST00000627241 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
RBM12B-208ENST00000627241 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
RBM12B-208ENST00000627241 TOP2AP11388 1531 aaKnown RBP18.96■□□□□ 0.63
RBM12B-208ENST00000627241 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
RBM12B-208ENST00000627241 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
RBM12B-208ENST00000627241 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
RBM12B-208ENST00000627241 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
RBM12B-208ENST00000627241 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
RBM12B-208ENST00000627241 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
RBM12B-208ENST00000627241 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
RBM12B-208ENST00000627241 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
RBM12B-208ENST00000627241 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
RBM12B-208ENST00000627241 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
RBM12B-208ENST00000627241 SOGA1O94964 1423 aa18.54■□□□□ 0.56
RBM12B-208ENST00000627241 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
RBM12B-208ENST00000627241 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
RBM12B-208ENST00000627241 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
RBM12B-208ENST00000627241 HMGXB3Q12766 1538 aa18.39■□□□□ 0.53
RBM12B-208ENST00000627241 PPARGC1BQ86YN6 1023 aaKnown RBP18.38■□□□□ 0.53
RBM12B-208ENST00000627241 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
RBM12B-208ENST00000627241 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
RBM12B-208ENST00000627241 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
RBM12B-208ENST00000627241 CFTRP13569 1480 aa18.2■□□□□ 0.5
RBM12B-208ENST00000627241 CUX1P39880 1505 aa18.18■□□□□ 0.5
RBM12B-208ENST00000627241 TOP2BQ02880 1626 aa18.17■□□□□ 0.5
RBM12B-208ENST00000627241 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
RBM12B-208ENST00000627241 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
RBM12B-208ENST00000627241 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
RBM12B-208ENST00000627241 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
RBM12B-208ENST00000627241 NESP48681 1621 aa18.12■□□□□ 0.49
RBM12B-208ENST00000627241 HRCP23327 699 aa18.12■□□□□ 0.49
RBM12B-208ENST00000627241 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
RBM12B-208ENST00000627241 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
RBM12B-208ENST00000627241 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
RBM12B-208ENST00000627241 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.48
RBM12B-208ENST00000627241 EEA1Q15075 1411 aa18.07■□□□□ 0.48
RBM12B-208ENST00000627241 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
RBM12B-208ENST00000627241 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
RBM12B-208ENST00000627241 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
RBM12B-208ENST00000627241 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
RBM12B-208ENST00000627241 KIF21BO75037 1637 aa17.97■□□□□ 0.47
RBM12B-208ENST00000627241 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
RBM12B-208ENST00000627241 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
RBM12B-208ENST00000627241 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
RBM12B-208ENST00000627241 CLIP1P30622 1438 aa17.87■□□□□ 0.45
RBM12B-208ENST00000627241 CUX2O14529 1486 aa17.87■□□□□ 0.45
RBM12B-208ENST00000627241 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
RBM12B-208ENST00000627241 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
RBM12B-208ENST00000627241 IGF1RP08069 1367 aa17.79■□□□□ 0.44
RBM12B-208ENST00000627241 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
RBM12B-208ENST00000627241 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
RBM12B-208ENST00000627241 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.43
RBM12B-208ENST00000627241 KIF21AQ7Z4S6 1674 aa17.75■□□□□ 0.43
RBM12B-208ENST00000627241 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
RBM12B-208ENST00000627241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
RBM12B-208ENST00000627241 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
RBM12B-208ENST00000627241 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
RBM12B-208ENST00000627241 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
RBM12B-208ENST00000627241 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.42
RBM12B-208ENST00000627241 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
RBM12B-208ENST00000627241 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
RBM12B-208ENST00000627241 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
RBM12B-208ENST00000627241 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
RBM12B-208ENST00000627241 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
RBM12B-208ENST00000627241 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
RBM12B-208ENST00000627241 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
RBM12B-208ENST00000627241 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
RBM12B-208ENST00000627241 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
RBM12B-208ENST00000627241 APLP2Q06481 763 aa17.5■□□□□ 0.39
RBM12B-208ENST00000627241 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
RBM12B-208ENST00000627241 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
RBM12B-208ENST00000627241 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
RBM12B-208ENST00000627241 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.39
RBM12B-208ENST00000627241 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
RBM12B-208ENST00000627241 FHOD3Q2V2M9 1422 aa17.44■□□□□ 0.38
RBM12B-208ENST00000627241 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
RBM12B-208ENST00000627241 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms