RNA–Protein interactions for RNA: ENST00000626993.2

HIPK1-211, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 5 BASIC

Gene HIPK1, Length 8,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-211ENST00000626993 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
HIPK1-211ENST00000626993 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.26
HIPK1-211ENST00000626993 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.3
HIPK1-211ENST00000626993 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
HIPK1-211ENST00000626993 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.37
HIPK1-211ENST00000626993 ZCCHC6Q5VYS8 1495 aaKnown RBP12.73□□□□□ -0.37
HIPK1-211ENST00000626993 ABCC9O60706 1549 aa12.62□□□□□ -0.39
HIPK1-211ENST00000626993 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
HIPK1-211ENST00000626993 NACADO15069 1562 aa12.41□□□□□ -0.42
HIPK1-211ENST00000626993 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
HIPK1-211ENST00000626993 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
HIPK1-211ENST00000626993 SCRIBQ14160 1630 aa12.27□□□□□ -0.44
HIPK1-211ENST00000626993 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
HIPK1-211ENST00000626993 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
HIPK1-211ENST00000626993 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
HIPK1-211ENST00000626993 CHIC1Q5VXU3 224 aa11.91□□□□□ -0.5
HIPK1-211ENST00000626993 RSF1Q96T23 1441 aaPredicted RBP11.87□□□□□ -0.51
HIPK1-211ENST00000626993 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
HIPK1-211ENST00000626993 APLP2Q06481 763 aa11.8□□□□□ -0.52
HIPK1-211ENST00000626993 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
HIPK1-211ENST00000626993 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
HIPK1-211ENST00000626993 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
HIPK1-211ENST00000626993 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
HIPK1-211ENST00000626993 UBTFP17480 764 aaKnown RBP11.69□□□□□ -0.54
HIPK1-211ENST00000626993 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
HIPK1-211ENST00000626993 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
HIPK1-211ENST00000626993 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
HIPK1-211ENST00000626993 WIZO95785 1651 aa11.54□□□□□ -0.56
HIPK1-211ENST00000626993 EEA1Q15075 1411 aa11.52□□□□□ -0.57
HIPK1-211ENST00000626993 ATAD2BQ9ULI0 1458 aa11.48□□□□□ -0.57
HIPK1-211ENST00000626993 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
HIPK1-211ENST00000626993 LOC105371045A0A1W2PR82 267 aa11.47□□□□□ -0.57
HIPK1-211ENST00000626993 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
HIPK1-211ENST00000626993 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
HIPK1-211ENST00000626993 PCGF6Q9BYE7 350 aa11.46□□□□□ -0.58
HIPK1-211ENST00000626993 RANGAP1P46060 587 aaPredicted RBP11.44□□□□□ -0.58
HIPK1-211ENST00000626993 ZEB1P37275 1124 aaPredicted RBP11.44□□□□□ -0.58
HIPK1-211ENST00000626993 TRIM26Q12899 539 aaPredicted RBP11.43□□□□□ -0.58
HIPK1-211ENST00000626993 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
HIPK1-211ENST00000626993 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
HIPK1-211ENST00000626993 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
HIPK1-211ENST00000626993 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
HIPK1-211ENST00000626993 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
HIPK1-211ENST00000626993 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
HIPK1-211ENST00000626993 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
HIPK1-211ENST00000626993 KIF27Q86VH2 1401 aa11.31□□□□□ -0.6
HIPK1-211ENST00000626993 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
HIPK1-211ENST00000626993 TTBK1Q5TCY1 1321 aaPredicted RBP11.3□□□□□ -0.6
HIPK1-211ENST00000626993 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
HIPK1-211ENST00000626993 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
HIPK1-211ENST00000626993 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
HIPK1-211ENST00000626993 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
HIPK1-211ENST00000626993 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
HIPK1-211ENST00000626993 TNIKQ9UKE5 1360 aa11.22□□□□□ -0.61
HIPK1-211ENST00000626993 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
HIPK1-211ENST00000626993 CC2D2AQ9P2K1 1620 aa11.19□□□□□ -0.62
HIPK1-211ENST00000626993 CLIP1P30622 1438 aa11.18□□□□□ -0.62
HIPK1-211ENST00000626993 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
HIPK1-211ENST00000626993 CFTRP13569 1480 aa11.15□□□□□ -0.62
HIPK1-211ENST00000626993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
HIPK1-211ENST00000626993 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
HIPK1-211ENST00000626993 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
HIPK1-211ENST00000626993 CUX2O14529 1486 aa11.13□□□□□ -0.63
HIPK1-211ENST00000626993 FANCD2Q9BXW9 1451 aa11.13□□□□□ -0.63
HIPK1-211ENST00000626993 SOGA1O94964 1423 aa11.12□□□□□ -0.63
HIPK1-211ENST00000626993 FBLN2P98095 1184 aa11.09□□□□□ -0.63
HIPK1-211ENST00000626993 HRCP23327 699 aa11.09□□□□□ -0.63
HIPK1-211ENST00000626993 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
HIPK1-211ENST00000626993 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
HIPK1-211ENST00000626993 TOP2BQ02880 1626 aa11.04□□□□□ -0.64
HIPK1-211ENST00000626993 CHMP7Q8WUX9 453 aaPredicted RBP11.04□□□□□ -0.64
HIPK1-211ENST00000626993 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
HIPK1-211ENST00000626993 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.65
HIPK1-211ENST00000626993 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
HIPK1-211ENST00000626993 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
HIPK1-211ENST00000626993 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
HIPK1-211ENST00000626993 FAM50AQ14320 339 aaKnown RBP10.98□□□□□ -0.65
HIPK1-211ENST00000626993 ITGAEP38570 1179 aa10.98□□□□□ -0.65
HIPK1-211ENST00000626993 P3H3Q8IVL6 736 aa10.98□□□□□ -0.65
HIPK1-211ENST00000626993 KIF21BO75037 1637 aa10.97□□□□□ -0.65
HIPK1-211ENST00000626993 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
HIPK1-211ENST00000626993 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
HIPK1-211ENST00000626993 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.65
HIPK1-211ENST00000626993 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
HIPK1-211ENST00000626993 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
HIPK1-211ENST00000626993 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
HIPK1-211ENST00000626993 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
HIPK1-211ENST00000626993 CUX1P39880 1505 aa10.92□□□□□ -0.66
HIPK1-211ENST00000626993 FMN1Q68DA7 1419 aa10.91□□□□□ -0.66
HIPK1-211ENST00000626993 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
HIPK1-211ENST00000626993 TOPBP1Q92547 1522 aa10.9□□□□□ -0.66
HIPK1-211ENST00000626993 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
HIPK1-211ENST00000626993 RUSC2Q8N2Y8 1516 aa10.87□□□□□ -0.67
HIPK1-211ENST00000626993 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
HIPK1-211ENST00000626993 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
HIPK1-211ENST00000626993 NESP48681 1621 aa10.87□□□□□ -0.67
HIPK1-211ENST00000626993 CARMIL2Q6F5E8 1435 aa10.87□□□□□ -0.67
HIPK1-211ENST00000626993 IGF1RP08069 1367 aa10.86□□□□□ -0.67
HIPK1-211ENST00000626993 MYT1LQ9UL68 1186 aa10.85□□□□□ -0.67
HIPK1-211ENST00000626993 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms