RNA–Protein interactions for RNA: ENST00000625943.1

SNORD38B-202, Transcript of small nucleolar RNA, C/D box 38B, humanhuman

BASIC

Gene SNORD38B, Length 69 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD38B-202ENST00000625943 AEBP2Q6ZN18 517 aaPredicted RBP8.07□□□□□ -1.12
SNORD38B-202ENST00000625943 CHIC1Q5VXU3 224 aa7.72□□□□□ -1.17
SNORD38B-202ENST00000625943 SENP3Q9H4L4 574 aaPredicted RBP6.82□□□□□ -1.32
SNORD38B-202ENST00000625943 PHF23Q9BUL5 403 aaPredicted RBP6.81□□□□□ -1.32
SNORD38B-202ENST00000625943 FOXD1Q16676 465 aa6.39□□□□□ -1.39
SNORD38B-202ENST00000625943 PLPPR3Q6T4P5 718 aa6.18□□□□□ -1.42
SNORD38B-202ENST00000625943 PPP6R1Q9UPN7 881 aa6.06□□□□□ -1.44
SNORD38B-202ENST00000625943 ADRA2BP18089 450 aa6□□□□□ -1.45
SNORD38B-202ENST00000625943 PIAS4Q8N2W9 510 aaPredicted RBP5.93□□□□□ -1.46
SNORD38B-202ENST00000625943 MSH5O43196 834 aa5.9□□□□□ -1.46
SNORD38B-202ENST00000625943 POTEDQ86YR6 584 aa5.66□□□□□ -1.5
SNORD38B-202ENST00000625943 MAPK8IP2Q13387 824 aaPredicted RBP5.51□□□□□ -1.53
SNORD38B-202ENST00000625943 SCAF1Q9H7N4 1312 aaKnown RBP5.47□□□□□ -1.53
SNORD38B-202ENST00000625943 PPP4R3CPQ6ZMV5 832 aa5.44□□□□□ -1.54
SNORD38B-202ENST00000625943 DMRT2Q9Y5R5 561 aa5.44□□□□□ -1.54
SNORD38B-202ENST00000625943 CNKSR2Q8WXI2 1034 aa5.31□□□□□ -1.56
SNORD38B-202ENST00000625943 HOXD11P31277 338 aaPredicted RBP5.3□□□□□ -1.56
SNORD38B-202ENST00000625943 RNF216Q9NWF9 866 aaPredicted RBP5.26□□□□□ -1.57
SNORD38B-202ENST00000625943 NCBP3Q53F19 620 aaKnown RBP5.22□□□□□ -1.57
SNORD38B-202ENST00000625943 NPM3O75607 178 aaKnown RBP5.18□□□□□ -1.58
SNORD38B-202ENST00000625943 KCNA4P22459 653 aa5.15□□□□□ -1.59
SNORD38B-202ENST00000625943 DCAF8L1A6NGE4 600 aa5.13□□□□□ -1.59
SNORD38B-202ENST00000625943 DNAJC5BQ9UF47 199 aa5.11□□□□□ -1.59
SNORD38B-202ENST00000625943 RNF39Q9H2S5 420 aa5.08□□□□□ -1.6
SNORD38B-202ENST00000625943 CACNB1Q02641 598 aaPredicted RBP5□□□□□ -1.61
SNORD38B-202ENST00000625943 C1QBPQ07021 282 aaKnown RBP5□□□□□ -1.61
SNORD38B-202ENST00000625943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.98□□□□□ -1.61
SNORD38B-202ENST00000625943 SLC4A2P04920 1241 aa4.96□□□□□ -1.62
SNORD38B-202ENST00000625943 U3KPZ7 1027 aaPredicted RBP4.93□□□□□ -1.62
SNORD38B-202ENST00000625943 SLC4A1APQ9BWU0 796 aaKnown RBP4.84□□□□□ -1.63
SNORD38B-202ENST00000625943 SPINK5Q9NQ38 1064 aaPredicted RBP4.83□□□□□ -1.64
SNORD38B-202ENST00000625943 DSG3P32926 999 aa4.78□□□□□ -1.64
SNORD38B-202ENST00000625943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.76□□□□□ -1.65
SNORD38B-202ENST00000625943 ZBTB22O15209 634 aa4.76□□□□□ -1.65
SNORD38B-202ENST00000625943 CAPN15O75808 1086 aa4.76□□□□□ -1.65
SNORD38B-202ENST00000625943 MYCNP04198 464 aaPredicted RBP4.76□□□□□ -1.65
SNORD38B-202ENST00000625943 HNRNPUL2Q1KMD3 747 aaKnown RBP4.76□□□□□ -1.65
SNORD38B-202ENST00000625943 FOXD4L1Q9NU39 408 aa4.76□□□□□ -1.65
SNORD38B-202ENST00000625943 SAMD1Q6SPF0 538 aaPredicted RBP4.75□□□□□ -1.65
SNORD38B-202ENST00000625943 APLP2Q06481 763 aa4.73□□□□□ -1.65
SNORD38B-202ENST00000625943 TRHP20396 242 aaPredicted RBP4.71□□□□□ -1.66
SNORD38B-202ENST00000625943 ZNF219Q9P2Y4 722 aaPredicted RBP4.71□□□□□ -1.66
SNORD38B-202ENST00000625943 ATF5Q9Y2D1 282 aaPredicted RBP4.69□□□□□ -1.66
SNORD38B-202ENST00000625943 ABCB7O75027 752 aa4.67□□□□□ -1.66
SNORD38B-202ENST00000625943 POLA2Q14181 598 aa4.64□□□□□ -1.67
SNORD38B-202ENST00000625943 ATXN8OSP0DMR3 200 aa4.62□□□□□ -1.67
SNORD38B-202ENST00000625943 CSRNP3Q8WYN3 585 aa4.61□□□□□ -1.67
SNORD38B-202ENST00000625943 EHMT2Q96KQ7 1210 aa4.51□□□□□ -1.69
SNORD38B-202ENST00000625943 RBM42Q9BTD8 480 aaKnown RBP4.51□□□□□ -1.69
SNORD38B-202ENST00000625943 ZBTB12Q9Y330 459 aaPredicted RBP4.51□□□□□ -1.69
SNORD38B-202ENST00000625943 MKRN4PQ13434 485 aaPredicted RBP4.48□□□□□ -1.69
SNORD38B-202ENST00000625943 OSCARQ8IYS5 282 aa4.46□□□□□ -1.7
SNORD38B-202ENST00000625943 AKT1S1Q96B36 256 aa4.45□□□□□ -1.7
SNORD38B-202ENST00000625943 FBLN2P98095 1184 aa4.43□□□□□ -1.7
SNORD38B-202ENST00000625943 POTEHQ6S545 545 aa4.43□□□□□ -1.7
SNORD38B-202ENST00000625943 REM2Q8IYK8 340 aaPredicted RBP4.42□□□□□ -1.7
SNORD38B-202ENST00000625943 SPDYE2BA6NHP3 402 aa4.41□□□□□ -1.7
SNORD38B-202ENST00000625943 SPDYE6P0CI01 402 aa4.41□□□□□ -1.7
SNORD38B-202ENST00000625943 SPDYE2Q495Y8 402 aa4.41□□□□□ -1.7
SNORD38B-202ENST00000625943 CHRDL2Q6WN34 429 aa4.4□□□□□ -1.71
SNORD38B-202ENST00000625943 SSUH2Q9Y2M2 353 aa4.38□□□□□ -1.71
SNORD38B-202ENST00000625943 PITPNM1O00562 1244 aa4.35□□□□□ -1.71
SNORD38B-202ENST00000625943 ZNF692Q9BU19 519 aaPredicted RBP4.35□□□□□ -1.71
SNORD38B-202ENST00000625943 FXR2P51116 673 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORD38B-202ENST00000625943 PIP4P2Q8N4L2 257 aa4.32□□□□□ -1.72
SNORD38B-202ENST00000625943 PABPN1Q86U42 306 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNORD38B-202ENST00000625943 SPDYE1Q8NFV5 336 aaPredicted RBP4.29□□□□□ -1.72
SNORD38B-202ENST00000625943 CLEC11AQ9Y240 323 aa4.27□□□□□ -1.73
SNORD38B-202ENST00000625943 SPDYE4A6NLX3 237 aa4.26□□□□□ -1.73
SNORD38B-202ENST00000625943 PROM2Q8N271 834 aa4.24□□□□□ -1.73
SNORD38B-202ENST00000625943 PRR29P0C7W0 189 aa4.23□□□□□ -1.73
SNORD38B-202ENST00000625943 PRKAR2AP13861 404 aaKnown RBP4.23□□□□□ -1.73
SNORD38B-202ENST00000625943 EVX2Q03828 476 aa4.22□□□□□ -1.73
SNORD38B-202ENST00000625943 CHADLQ6NUI6 762 aa4.21□□□□□ -1.74
SNORD38B-202ENST00000625943 HAX1O00165 279 aa4.2□□□□□ -1.74
SNORD38B-202ENST00000625943 STAG3Q9UJ98 1225 aa4.2□□□□□ -1.74
SNORD38B-202ENST00000625943 C19orf67A6NJJ6 358 aa4.19□□□□□ -1.74
SNORD38B-202ENST00000625943 SP7Q8TDD2 431 aaPredicted RBP4.19□□□□□ -1.74
SNORD38B-202ENST00000625943 CREBZFQ9NS37 354 aa4.18□□□□□ -1.74
SNORD38B-202ENST00000625943 FARP1Q9Y4F1 1045 aaPredicted RBP4.17□□□□□ -1.74
SNORD38B-202ENST00000625943 MNX1P50219 401 aaPredicted RBP4.14□□□□□ -1.75
SNORD38B-202ENST00000625943 FKBP8Q14318 412 aa4.12□□□□□ -1.75
SNORD38B-202ENST00000625943 GABBR2O75899 941 aa4.1□□□□□ -1.75
SNORD38B-202ENST00000625943 CD44P16070 742 aaKnown RBP4.09□□□□□ -1.75
SNORD38B-202ENST00000625943 ZNF579Q8NAF0 562 aaKnown RBP4.06□□□□□ -1.76
SNORD38B-202ENST00000625943 NPM1P06748 294 aaKnown RBP eCLIP4.05□□□□□ -1.76
SNORD38B-202ENST00000625943 CLCN6P51797 869 aa4.05□□□□□ -1.76
SNORD38B-202ENST00000625943 MIER1Q8N108 512 aa4.05□□□□□ -1.76
SNORD38B-202ENST00000625943 ZRANB1Q9UGI0 708 aa4.05□□□□□ -1.76
SNORD38B-202ENST00000625943 POTEIP0CG38 1075 aa4.04□□□□□ -1.76
SNORD38B-202ENST00000625943 NUBP1P53384 320 aa4.01□□□□□ -1.77
SNORD38B-202ENST00000625943 RASEFQ8IZ41 740 aa4.01□□□□□ -1.77
SNORD38B-202ENST00000625943 PHF12Q96QT6 1004 aa4.01□□□□□ -1.77
SNORD38B-202ENST00000625943 FBXO3Q9UK99 471 aa4.01□□□□□ -1.77
SNORD38B-202ENST00000625943 CCDC61Q9Y6R9 512 aa4.01□□□□□ -1.77
SNORD38B-202ENST00000625943 GALR2O43603 387 aaPredicted RBP4□□□□□ -1.77
SNORD38B-202ENST00000625943 PLCD3Q8N3E9 789 aa4□□□□□ -1.77
SNORD38B-202ENST00000625943 PAK3O75914 559 aaPredicted RBP3.99□□□□□ -1.77
SNORD38B-202ENST00000625943 PLEKHG5O94827 1062 aa3.99□□□□□ -1.77
SNORD38B-202ENST00000625943 TSPYL2Q9H2G4 693 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms