RNA–Protein interactions for RNA: ENST00000624728.1

CU634019.6-203, humanhuman

TSL 1 (best) BASIC

Gene CU634019.6, Length 936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU634019.6-203ENST00000624728 AEBP2Q6ZN18 517 aaPredicted RBP35.61■■■■□ 3.29
CU634019.6-203ENST00000624728 CHIC1Q5VXU3 224 aa33.71■■■□□ 2.99
CU634019.6-203ENST00000624728 SENP3Q9H4L4 574 aaPredicted RBP30.13■■■□□ 2.41
CU634019.6-203ENST00000624728 PHF23Q9BUL5 403 aaPredicted RBP29.85■■■□□ 2.37
CU634019.6-203ENST00000624728 FOXD1Q16676 465 aa28.24■■■□□ 2.11
CU634019.6-203ENST00000624728 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
CU634019.6-203ENST00000624728 PPP6R1Q9UPN7 881 aa26.52■■□□□ 1.84
CU634019.6-203ENST00000624728 ADRA2BP18089 450 aa26.38■■□□□ 1.81
CU634019.6-203ENST00000624728 PIAS4Q8N2W9 510 aaPredicted RBP26.31■■□□□ 1.8
CU634019.6-203ENST00000624728 MSH5O43196 834 aa26.22■■□□□ 1.79
CU634019.6-203ENST00000624728 POTEDQ86YR6 584 aa25.7■■□□□ 1.7
CU634019.6-203ENST00000624728 MAPK8IP2Q13387 824 aaPredicted RBP24.27■■□□□ 1.48
CU634019.6-203ENST00000624728 DMRT2Q9Y5R5 561 aa23.97■■□□□ 1.43
CU634019.6-203ENST00000624728 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
CU634019.6-203ENST00000624728 PPP4R3CPQ6ZMV5 832 aa23.63■■□□□ 1.37
CU634019.6-203ENST00000624728 HOXD11P31277 338 aaPredicted RBP23.1■■□□□ 1.29
CU634019.6-203ENST00000624728 CNKSR2Q8WXI2 1034 aa23.1■■□□□ 1.29
CU634019.6-203ENST00000624728 DCAF8L1A6NGE4 600 aa22.94■■□□□ 1.26
CU634019.6-203ENST00000624728 RNF216Q9NWF9 866 aaPredicted RBP22.89■■□□□ 1.25
CU634019.6-203ENST00000624728 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
CU634019.6-203ENST00000624728 NCBP3Q53F19 620 aaKnown RBP22.56■■□□□ 1.2
CU634019.6-203ENST00000624728 CACNB1Q02641 598 aaPredicted RBP22.53■■□□□ 1.2
CU634019.6-203ENST00000624728 RNF39Q9H2S5 420 aa22.5■■□□□ 1.19
CU634019.6-203ENST00000624728 NPM3O75607 178 aaKnown RBP22.45■■□□□ 1.18
CU634019.6-203ENST00000624728 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
CU634019.6-203ENST00000624728 KCNA4P22459 653 aa22.09■■□□□ 1.13
CU634019.6-203ENST00000624728 C1QBPQ07021 282 aaKnown RBP22.07■■□□□ 1.12
CU634019.6-203ENST00000624728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.1
CU634019.6-203ENST00000624728 U3KPZ7 1027 aaPredicted RBP21.62■■□□□ 1.05
CU634019.6-203ENST00000624728 SLC4A2P04920 1241 aa21.49■■□□□ 1.03
CU634019.6-203ENST00000624728 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
CU634019.6-203ENST00000624728 CAPN15O75808 1086 aa21.15■□□□□ 0.98
CU634019.6-203ENST00000624728 DSG3P32926 999 aa21.1■□□□□ 0.97
CU634019.6-203ENST00000624728 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
CU634019.6-203ENST00000624728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
CU634019.6-203ENST00000624728 ABCB7O75027 752 aa20.76■□□□□ 0.91
CU634019.6-203ENST00000624728 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
CU634019.6-203ENST00000624728 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
CU634019.6-203ENST00000624728 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
CU634019.6-203ENST00000624728 ZNF219Q9P2Y4 722 aaPredicted RBP20.71■□□□□ 0.91
CU634019.6-203ENST00000624728 APLP2Q06481 763 aa20.7■□□□□ 0.9
CU634019.6-203ENST00000624728 ABCC9O60706 1549 aa20.66■□□□□ 0.9
CU634019.6-203ENST00000624728 MYCNP04198 464 aaPredicted RBP20.64■□□□□ 0.89
CU634019.6-203ENST00000624728 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
CU634019.6-203ENST00000624728 ZBTB22O15209 634 aa20.4■□□□□ 0.86
CU634019.6-203ENST00000624728 ATF5Q9Y2D1 282 aaPredicted RBP20.39■□□□□ 0.85
CU634019.6-203ENST00000624728 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
CU634019.6-203ENST00000624728 POLA2Q14181 598 aa20.32■□□□□ 0.84
CU634019.6-203ENST00000624728 POTEHQ6S545 545 aa20.1■□□□□ 0.81
CU634019.6-203ENST00000624728 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
CU634019.6-203ENST00000624728 ATXN8OSP0DMR3 200 aa19.78■□□□□ 0.76
CU634019.6-203ENST00000624728 ZBTB12Q9Y330 459 aaPredicted RBP19.72■□□□□ 0.75
CU634019.6-203ENST00000624728 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
CU634019.6-203ENST00000624728 CHRDL2Q6WN34 429 aa19.62■□□□□ 0.73
CU634019.6-203ENST00000624728 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
CU634019.6-203ENST00000624728 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.71
CU634019.6-203ENST00000624728 REM2Q8IYK8 340 aaPredicted RBP19.46■□□□□ 0.71
CU634019.6-203ENST00000624728 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
CU634019.6-203ENST00000624728 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
CU634019.6-203ENST00000624728 FBLN2P98095 1184 aa19.3■□□□□ 0.68
CU634019.6-203ENST00000624728 NACADO15069 1562 aa19.3■□□□□ 0.68
CU634019.6-203ENST00000624728 PITPNM1O00562 1244 aa19.28■□□□□ 0.68
CU634019.6-203ENST00000624728 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
CU634019.6-203ENST00000624728 SPDYE2BA6NHP3 402 aa19.21■□□□□ 0.67
CU634019.6-203ENST00000624728 SPDYE6P0CI01 402 aa19.21■□□□□ 0.67
CU634019.6-203ENST00000624728 SPDYE2Q495Y8 402 aa19.21■□□□□ 0.67
CU634019.6-203ENST00000624728 PIP4P2Q8N4L2 257 aa19.21■□□□□ 0.67
CU634019.6-203ENST00000624728 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
CU634019.6-203ENST00000624728 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
CU634019.6-203ENST00000624728 FXR2P51116 673 aaKnown RBP eCLIP19.08■□□□□ 0.64
CU634019.6-203ENST00000624728 SSUH2Q9Y2M2 353 aa19.05■□□□□ 0.64
CU634019.6-203ENST00000624728 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
CU634019.6-203ENST00000624728 ZNF692Q9BU19 519 aaPredicted RBP19.02■□□□□ 0.64
CU634019.6-203ENST00000624728 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
CU634019.6-203ENST00000624728 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
CU634019.6-203ENST00000624728 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
CU634019.6-203ENST00000624728 SPDYE1Q8NFV5 336 aaPredicted RBP18.85■□□□□ 0.61
CU634019.6-203ENST00000624728 SP7Q8TDD2 431 aaPredicted RBP18.84■□□□□ 0.61
CU634019.6-203ENST00000624728 HAX1O00165 279 aa18.78■□□□□ 0.6
CU634019.6-203ENST00000624728 EVX2Q03828 476 aa18.76■□□□□ 0.59
CU634019.6-203ENST00000624728 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
CU634019.6-203ENST00000624728 ZCCHC6Q5VYS8 1495 aaKnown RBP18.7■□□□□ 0.58
CU634019.6-203ENST00000624728 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
CU634019.6-203ENST00000624728 CHADLQ6NUI6 762 aa18.63■□□□□ 0.57
CU634019.6-203ENST00000624728 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
CU634019.6-203ENST00000624728 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
CU634019.6-203ENST00000624728 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
CU634019.6-203ENST00000624728 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
CU634019.6-203ENST00000624728 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
CU634019.6-203ENST00000624728 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
CU634019.6-203ENST00000624728 C19orf67A6NJJ6 358 aa18.47■□□□□ 0.55
CU634019.6-203ENST00000624728 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
CU634019.6-203ENST00000624728 FARP1Q9Y4F1 1045 aaPredicted RBP18.27■□□□□ 0.52
CU634019.6-203ENST00000624728 GABBR2O75899 941 aa18.2■□□□□ 0.5
CU634019.6-203ENST00000624728 CREBZFQ9NS37 354 aa18.2■□□□□ 0.5
CU634019.6-203ENST00000624728 CD44P16070 742 aaKnown RBP18.13■□□□□ 0.49
CU634019.6-203ENST00000624728 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
CU634019.6-203ENST00000624728 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
CU634019.6-203ENST00000624728 PROM2Q8N271 834 aa18.01■□□□□ 0.47
CU634019.6-203ENST00000624728 MNX1P50219 401 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms