RNA–Protein interactions for RNA: ENST00000623520.1

AC016542.3-201, humanhuman

BASIC

Gene AC016542.3, Length 619 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016542.3-201ENST00000623520 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
AC016542.3-201ENST00000623520 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
AC016542.3-201ENST00000623520 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
AC016542.3-201ENST00000623520 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
AC016542.3-201ENST00000623520 FOXD1Q16676 465 aa18.41■□□□□ 0.54
AC016542.3-201ENST00000623520 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
AC016542.3-201ENST00000623520 POTEDQ86YR6 584 aa17.83■□□□□ 0.44
AC016542.3-201ENST00000623520 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
AC016542.3-201ENST00000623520 MSH5O43196 834 aa17.25■□□□□ 0.35
AC016542.3-201ENST00000623520 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
AC016542.3-201ENST00000623520 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
AC016542.3-201ENST00000623520 ADRA2BP18089 450 aa16.89■□□□□ 0.29
AC016542.3-201ENST00000623520 KCNA4P22459 653 aa16.26■□□□□ 0.19
AC016542.3-201ENST00000623520 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
AC016542.3-201ENST00000623520 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
AC016542.3-201ENST00000623520 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
AC016542.3-201ENST00000623520 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
AC016542.3-201ENST00000623520 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
AC016542.3-201ENST00000623520 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
AC016542.3-201ENST00000623520 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
AC016542.3-201ENST00000623520 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
AC016542.3-201ENST00000623520 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
AC016542.3-201ENST00000623520 CNKSR2Q8WXI2 1034 aa15.39■□□□□ 0.05
AC016542.3-201ENST00000623520 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
AC016542.3-201ENST00000623520 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
AC016542.3-201ENST00000623520 ABCC9O60706 1549 aa15.02□□□□□ -0.01
AC016542.3-201ENST00000623520 ZBTB22O15209 634 aa14.97□□□□□ -0.01
AC016542.3-201ENST00000623520 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
AC016542.3-201ENST00000623520 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
AC016542.3-201ENST00000623520 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
AC016542.3-201ENST00000623520 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
AC016542.3-201ENST00000623520 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
AC016542.3-201ENST00000623520 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
AC016542.3-201ENST00000623520 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
AC016542.3-201ENST00000623520 MYO15BQ96JP2 1530 aa14.54□□□□□ -0.08
AC016542.3-201ENST00000623520 NACADO15069 1562 aa14.54□□□□□ -0.08
AC016542.3-201ENST00000623520 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
AC016542.3-201ENST00000623520 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
AC016542.3-201ENST00000623520 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
AC016542.3-201ENST00000623520 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
AC016542.3-201ENST00000623520 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
AC016542.3-201ENST00000623520 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
AC016542.3-201ENST00000623520 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
AC016542.3-201ENST00000623520 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
AC016542.3-201ENST00000623520 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
AC016542.3-201ENST00000623520 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
AC016542.3-201ENST00000623520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.16
AC016542.3-201ENST00000623520 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
AC016542.3-201ENST00000623520 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
AC016542.3-201ENST00000623520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
AC016542.3-201ENST00000623520 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
AC016542.3-201ENST00000623520 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
AC016542.3-201ENST00000623520 FKBP8Q14318 412 aa13.87□□□□□ -0.19
AC016542.3-201ENST00000623520 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
AC016542.3-201ENST00000623520 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
AC016542.3-201ENST00000623520 POTEHQ6S545 545 aa13.85□□□□□ -0.19
AC016542.3-201ENST00000623520 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
AC016542.3-201ENST00000623520 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.22
AC016542.3-201ENST00000623520 DSG3P32926 999 aa13.68□□□□□ -0.22
AC016542.3-201ENST00000623520 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
AC016542.3-201ENST00000623520 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
AC016542.3-201ENST00000623520 CAPN15O75808 1086 aa13.64□□□□□ -0.23
AC016542.3-201ENST00000623520 APLP2Q06481 763 aa13.61□□□□□ -0.23
AC016542.3-201ENST00000623520 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
AC016542.3-201ENST00000623520 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
AC016542.3-201ENST00000623520 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
AC016542.3-201ENST00000623520 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
AC016542.3-201ENST00000623520 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
AC016542.3-201ENST00000623520 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
AC016542.3-201ENST00000623520 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
AC016542.3-201ENST00000623520 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
AC016542.3-201ENST00000623520 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
AC016542.3-201ENST00000623520 SMARCA2P51531 1590 aa13.42□□□□□ -0.26
AC016542.3-201ENST00000623520 ABCB7O75027 752 aa13.39□□□□□ -0.27
AC016542.3-201ENST00000623520 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
AC016542.3-201ENST00000623520 RSF1Q96T23 1441 aaPredicted RBP13.34□□□□□ -0.27
AC016542.3-201ENST00000623520 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
AC016542.3-201ENST00000623520 BAZ1BQ9UIG0 1483 aaKnown RBP13.31□□□□□ -0.28
AC016542.3-201ENST00000623520 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
AC016542.3-201ENST00000623520 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
AC016542.3-201ENST00000623520 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
AC016542.3-201ENST00000623520 WIZO95785 1651 aa13.27□□□□□ -0.29
AC016542.3-201ENST00000623520 FBLN2P98095 1184 aa13.26□□□□□ -0.29
AC016542.3-201ENST00000623520 POLA2Q14181 598 aa13.24□□□□□ -0.29
AC016542.3-201ENST00000623520 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
AC016542.3-201ENST00000623520 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
AC016542.3-201ENST00000623520 PROM2Q8N271 834 aa13.13□□□□□ -0.31
AC016542.3-201ENST00000623520 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
AC016542.3-201ENST00000623520 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
AC016542.3-201ENST00000623520 NESP48681 1621 aa13.03□□□□□ -0.32
AC016542.3-201ENST00000623520 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.33
AC016542.3-201ENST00000623520 VASPP50552 380 aaPredicted RBP13.01□□□□□ -0.33
AC016542.3-201ENST00000623520 CCDC88BA6NC98 1476 aa13.01□□□□□ -0.33
AC016542.3-201ENST00000623520 CFTRP13569 1480 aa12.98□□□□□ -0.33
AC016542.3-201ENST00000623520 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
AC016542.3-201ENST00000623520 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
AC016542.3-201ENST00000623520 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
AC016542.3-201ENST00000623520 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
AC016542.3-201ENST00000623520 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
AC016542.3-201ENST00000623520 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms