RNA–Protein interactions for RNA: ENST00000622991.1

PCDHB6-202, Transcript of protocadherin beta 6, humanhuman

TSL 2 BASIC

Gene PCDHB6, Length 2,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-202ENST00000622991 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
PCDHB6-202ENST00000622991 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
PCDHB6-202ENST00000622991 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
PCDHB6-202ENST00000622991 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
PCDHB6-202ENST00000622991 SHROOM4Q9ULL8 1493 aa29.35■■■□□ 2.29
PCDHB6-202ENST00000622991 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
PCDHB6-202ENST00000622991 ABCC9O60706 1549 aa28.78■■■□□ 2.2
PCDHB6-202ENST00000622991 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
PCDHB6-202ENST00000622991 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.13
PCDHB6-202ENST00000622991 NACADO15069 1562 aa28.24■■■□□ 2.11
PCDHB6-202ENST00000622991 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
PCDHB6-202ENST00000622991 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
PCDHB6-202ENST00000622991 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
PCDHB6-202ENST00000622991 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
PCDHB6-202ENST00000622991 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
PCDHB6-202ENST00000622991 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
PCDHB6-202ENST00000622991 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
PCDHB6-202ENST00000622991 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
PCDHB6-202ENST00000622991 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
PCDHB6-202ENST00000622991 WIZO95785 1651 aa27.11■■□□□ 1.93
PCDHB6-202ENST00000622991 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
PCDHB6-202ENST00000622991 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
PCDHB6-202ENST00000622991 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
PCDHB6-202ENST00000622991 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
PCDHB6-202ENST00000622991 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
PCDHB6-202ENST00000622991 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
PCDHB6-202ENST00000622991 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
PCDHB6-202ENST00000622991 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
PCDHB6-202ENST00000622991 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PCDHB6-202ENST00000622991 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
PCDHB6-202ENST00000622991 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
PCDHB6-202ENST00000622991 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
PCDHB6-202ENST00000622991 ABCC8Q09428 1581 aa26.2■■□□□ 1.79
PCDHB6-202ENST00000622991 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
PCDHB6-202ENST00000622991 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
PCDHB6-202ENST00000622991 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
PCDHB6-202ENST00000622991 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
PCDHB6-202ENST00000622991 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.73
PCDHB6-202ENST00000622991 HRCP23327 699 aa25.83■■□□□ 1.73
PCDHB6-202ENST00000622991 SOGA1O94964 1423 aa25.82■■□□□ 1.72
PCDHB6-202ENST00000622991 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
PCDHB6-202ENST00000622991 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
PCDHB6-202ENST00000622991 CFTRP13569 1480 aa25.72■■□□□ 1.71
PCDHB6-202ENST00000622991 PELP1Q8IZL8 1130 aaKnown RBP25.64■■□□□ 1.7
PCDHB6-202ENST00000622991 CSRNP3Q8WYN3 585 aa25.59■■□□□ 1.69
PCDHB6-202ENST00000622991 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
PCDHB6-202ENST00000622991 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
PCDHB6-202ENST00000622991 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
PCDHB6-202ENST00000622991 EEA1Q15075 1411 aa25.52■■□□□ 1.68
PCDHB6-202ENST00000622991 CUX1P39880 1505 aa25.5■■□□□ 1.67
PCDHB6-202ENST00000622991 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
PCDHB6-202ENST00000622991 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
PCDHB6-202ENST00000622991 NESP48681 1621 aa25.41■■□□□ 1.66
PCDHB6-202ENST00000622991 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
PCDHB6-202ENST00000622991 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
PCDHB6-202ENST00000622991 TNIKQ9UKE5 1360 aa25.32■■□□□ 1.64
PCDHB6-202ENST00000622991 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
PCDHB6-202ENST00000622991 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
PCDHB6-202ENST00000622991 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
PCDHB6-202ENST00000622991 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
PCDHB6-202ENST00000622991 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
PCDHB6-202ENST00000622991 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
PCDHB6-202ENST00000622991 KIF21BO75037 1637 aa25.2■■□□□ 1.62
PCDHB6-202ENST00000622991 TRIM26Q12899 539 aaPredicted RBP25.2■■□□□ 1.62
PCDHB6-202ENST00000622991 FGD5Q6ZNL6 1462 aa25.17■■□□□ 1.62
PCDHB6-202ENST00000622991 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
PCDHB6-202ENST00000622991 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.61
PCDHB6-202ENST00000622991 CUX2O14529 1486 aa25.1■■□□□ 1.61
PCDHB6-202ENST00000622991 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
PCDHB6-202ENST00000622991 RANGAP1P46060 587 aaPredicted RBP25.07■■□□□ 1.6
PCDHB6-202ENST00000622991 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
PCDHB6-202ENST00000622991 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
PCDHB6-202ENST00000622991 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
PCDHB6-202ENST00000622991 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.6
PCDHB6-202ENST00000622991 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
PCDHB6-202ENST00000622991 IGF1RP08069 1367 aa25.01■■□□□ 1.59
PCDHB6-202ENST00000622991 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
PCDHB6-202ENST00000622991 CLIP1P30622 1438 aa24.99■■□□□ 1.59
PCDHB6-202ENST00000622991 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
PCDHB6-202ENST00000622991 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
PCDHB6-202ENST00000622991 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
PCDHB6-202ENST00000622991 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
PCDHB6-202ENST00000622991 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
PCDHB6-202ENST00000622991 MYT1Q01538 1121 aa24.8■■□□□ 1.56
PCDHB6-202ENST00000622991 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
PCDHB6-202ENST00000622991 VPS8Q8N3P4 1428 aa24.77■■□□□ 1.56
PCDHB6-202ENST00000622991 ARAP1Q96P48 1450 aa24.7■■□□□ 1.55
PCDHB6-202ENST00000622991 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
PCDHB6-202ENST00000622991 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
PCDHB6-202ENST00000622991 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
PCDHB6-202ENST00000622991 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
PCDHB6-202ENST00000622991 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
PCDHB6-202ENST00000622991 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
PCDHB6-202ENST00000622991 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
PCDHB6-202ENST00000622991 APLP2Q06481 763 aa24.57■■□□□ 1.52
PCDHB6-202ENST00000622991 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.52
PCDHB6-202ENST00000622991 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
PCDHB6-202ENST00000622991 CUL7Q14999 1698 aa24.53■■□□□ 1.52
PCDHB6-202ENST00000622991 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
PCDHB6-202ENST00000622991 WDR62O43379 1518 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms