RNA–Protein interactions for RNA: ENST00000621703.4

NPRL3-213, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best)

Gene NPRL3, Length 2,812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-213ENST00000621703 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.24
NPRL3-213ENST00000621703 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
NPRL3-213ENST00000621703 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
NPRL3-213ENST00000621703 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
NPRL3-213ENST00000621703 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
NPRL3-213ENST00000621703 ABCC9O60706 1549 aa29.38■■■□□ 2.29
NPRL3-213ENST00000621703 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
NPRL3-213ENST00000621703 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
NPRL3-213ENST00000621703 SCRIBQ14160 1630 aa28.6■■■□□ 2.17
NPRL3-213ENST00000621703 NACADO15069 1562 aa28.17■■■□□ 2.1
NPRL3-213ENST00000621703 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
NPRL3-213ENST00000621703 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
NPRL3-213ENST00000621703 RB1CC1Q8TDY2 1594 aa28.01■■■□□ 2.07
NPRL3-213ENST00000621703 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
NPRL3-213ENST00000621703 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
NPRL3-213ENST00000621703 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
NPRL3-213ENST00000621703 UNC13AQ9UPW8 1703 aa27.62■■■□□ 2.01
NPRL3-213ENST00000621703 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
NPRL3-213ENST00000621703 BICRAQ9NZM4 1560 aa27.36■■□□□ 1.97
NPRL3-213ENST00000621703 WIZO95785 1651 aa27.35■■□□□ 1.97
NPRL3-213ENST00000621703 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
NPRL3-213ENST00000621703 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
NPRL3-213ENST00000621703 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
NPRL3-213ENST00000621703 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
NPRL3-213ENST00000621703 FAM9AQ8IZU1 332 aaPredicted RBP27■■□□□ 1.91
NPRL3-213ENST00000621703 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
NPRL3-213ENST00000621703 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
NPRL3-213ENST00000621703 TOP2AP11388 1531 aaKnown RBP26.68■■□□□ 1.86
NPRL3-213ENST00000621703 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
NPRL3-213ENST00000621703 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
NPRL3-213ENST00000621703 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
NPRL3-213ENST00000621703 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
NPRL3-213ENST00000621703 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
NPRL3-213ENST00000621703 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
NPRL3-213ENST00000621703 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
NPRL3-213ENST00000621703 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
NPRL3-213ENST00000621703 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
NPRL3-213ENST00000621703 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
NPRL3-213ENST00000621703 SOGA1O94964 1423 aa26.11■■□□□ 1.77
NPRL3-213ENST00000621703 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
NPRL3-213ENST00000621703 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
NPRL3-213ENST00000621703 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
NPRL3-213ENST00000621703 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
NPRL3-213ENST00000621703 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
NPRL3-213ENST00000621703 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
NPRL3-213ENST00000621703 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.73
NPRL3-213ENST00000621703 NESP48681 1621 aa25.88■■□□□ 1.73
NPRL3-213ENST00000621703 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
NPRL3-213ENST00000621703 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
NPRL3-213ENST00000621703 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
NPRL3-213ENST00000621703 CFTRP13569 1480 aa25.75■■□□□ 1.71
NPRL3-213ENST00000621703 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
NPRL3-213ENST00000621703 HRCP23327 699 aa25.7■■□□□ 1.7
NPRL3-213ENST00000621703 CUX1P39880 1505 aa25.65■■□□□ 1.7
NPRL3-213ENST00000621703 EEA1Q15075 1411 aa25.62■■□□□ 1.69
NPRL3-213ENST00000621703 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
NPRL3-213ENST00000621703 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
NPRL3-213ENST00000621703 TNIKQ9UKE5 1360 aa25.54■■□□□ 1.68
NPRL3-213ENST00000621703 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
NPRL3-213ENST00000621703 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
NPRL3-213ENST00000621703 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
NPRL3-213ENST00000621703 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
NPRL3-213ENST00000621703 CEP164Q9UPV0 1460 aa25.42■■□□□ 1.66
NPRL3-213ENST00000621703 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
NPRL3-213ENST00000621703 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
NPRL3-213ENST00000621703 CUX2O14529 1486 aa25.37■■□□□ 1.65
NPRL3-213ENST00000621703 KIF21BO75037 1637 aa25.31■■□□□ 1.64
NPRL3-213ENST00000621703 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
NPRL3-213ENST00000621703 CLIP1P30622 1438 aa25.26■■□□□ 1.63
NPRL3-213ENST00000621703 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
NPRL3-213ENST00000621703 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
NPRL3-213ENST00000621703 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
NPRL3-213ENST00000621703 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
NPRL3-213ENST00000621703 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
NPRL3-213ENST00000621703 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
NPRL3-213ENST00000621703 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
NPRL3-213ENST00000621703 PRXQ9BXM0 1461 aa25.18■■□□□ 1.62
NPRL3-213ENST00000621703 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
NPRL3-213ENST00000621703 IGF1RP08069 1367 aa25.16■■□□□ 1.62
NPRL3-213ENST00000621703 LAMC3Q9Y6N6 1575 aa25.15■■□□□ 1.62
NPRL3-213ENST00000621703 DNMBPQ6XZF7 1577 aa25.07■■□□□ 1.6
NPRL3-213ENST00000621703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
NPRL3-213ENST00000621703 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
NPRL3-213ENST00000621703 ATP1B4Q9UN42 357 aaPredicted RBP25.02■■□□□ 1.6
NPRL3-213ENST00000621703 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
NPRL3-213ENST00000621703 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
NPRL3-213ENST00000621703 ERCC6Q03468 1493 aa25■■□□□ 1.59
NPRL3-213ENST00000621703 APLP2Q06481 763 aa24.97■■□□□ 1.59
NPRL3-213ENST00000621703 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.597e-9■■■■■ 34.8
NPRL3-213ENST00000621703 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
NPRL3-213ENST00000621703 ABCA10Q8WWZ4 1543 aa24.88■■□□□ 1.57
NPRL3-213ENST00000621703 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
NPRL3-213ENST00000621703 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
NPRL3-213ENST00000621703 FBLN2P98095 1184 aa24.85■■□□□ 1.57
NPRL3-213ENST00000621703 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
NPRL3-213ENST00000621703 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
NPRL3-213ENST00000621703 GAPVD1Q14C86 1478 aa24.82■■□□□ 1.56
NPRL3-213ENST00000621703 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
NPRL3-213ENST00000621703 ARHGAP35Q9NRY4 1499 aa24.81■■□□□ 1.56
NPRL3-213ENST00000621703 ZEB1P37275 1124 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms