RNA–Protein interactions for RNA: ENST00000620055.4

CCL4L2-215, Transcript of C-C motif chemokine ligand 4 like 2, humanhuman

TSL 1 (best) BASIC

Gene CCL4L2, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4L2-215ENST00000620055 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
CCL4L2-215ENST00000620055 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
CCL4L2-215ENST00000620055 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
CCL4L2-215ENST00000620055 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
CCL4L2-215ENST00000620055 FOXD1Q16676 465 aa22.15■■□□□ 1.14
CCL4L2-215ENST00000620055 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
CCL4L2-215ENST00000620055 MSH5O43196 834 aa20.87■□□□□ 0.93
CCL4L2-215ENST00000620055 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
CCL4L2-215ENST00000620055 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
CCL4L2-215ENST00000620055 ADRA2BP18089 450 aa20.21■□□□□ 0.83
CCL4L2-215ENST00000620055 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
CCL4L2-215ENST00000620055 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
CCL4L2-215ENST00000620055 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
CCL4L2-215ENST00000620055 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
CCL4L2-215ENST00000620055 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CCL4L2-215ENST00000620055 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
CCL4L2-215ENST00000620055 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
CCL4L2-215ENST00000620055 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
CCL4L2-215ENST00000620055 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
CCL4L2-215ENST00000620055 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
CCL4L2-215ENST00000620055 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
CCL4L2-215ENST00000620055 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
CCL4L2-215ENST00000620055 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
CCL4L2-215ENST00000620055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCL4L2-215ENST00000620055 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
CCL4L2-215ENST00000620055 POTEHQ6S545 545 aa16.68■□□□□ 0.26
CCL4L2-215ENST00000620055 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
CCL4L2-215ENST00000620055 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
CCL4L2-215ENST00000620055 DSG3P32926 999 aa16.49■□□□□ 0.23
CCL4L2-215ENST00000620055 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CCL4L2-215ENST00000620055 CAPN15O75808 1086 aa16.47■□□□□ 0.23
CCL4L2-215ENST00000620055 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
CCL4L2-215ENST00000620055 ABCB7O75027 752 aa16.06■□□□□ 0.16
CCL4L2-215ENST00000620055 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
CCL4L2-215ENST00000620055 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
CCL4L2-215ENST00000620055 APLP2Q06481 763 aa15.88■□□□□ 0.13
CCL4L2-215ENST00000620055 KCNA4P22459 653 aa15.79■□□□□ 0.12
CCL4L2-215ENST00000620055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
CCL4L2-215ENST00000620055 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
CCL4L2-215ENST00000620055 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
CCL4L2-215ENST00000620055 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
CCL4L2-215ENST00000620055 CHRDL2Q6WN34 429 aa15.62■□□□□ 0.09
CCL4L2-215ENST00000620055 POLA2Q14181 598 aa15.5■□□□□ 0.07
CCL4L2-215ENST00000620055 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
CCL4L2-215ENST00000620055 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
CCL4L2-215ENST00000620055 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
CCL4L2-215ENST00000620055 PIP4P2Q8N4L2 257 aa15.14■□□□□ 0.01
CCL4L2-215ENST00000620055 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
CCL4L2-215ENST00000620055 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
CCL4L2-215ENST00000620055 HAX1O00165 279 aa15.05■□□□□ -0
CCL4L2-215ENST00000620055 OSCARQ8IYS5 282 aa15.03■□□□□ -0
CCL4L2-215ENST00000620055 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
CCL4L2-215ENST00000620055 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
CCL4L2-215ENST00000620055 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCL4L2-215ENST00000620055 EVX2Q03828 476 aa14.87□□□□□ -0.03
CCL4L2-215ENST00000620055 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
CCL4L2-215ENST00000620055 SLC4A1APQ9BWU0 796 aaKnown RBP14.75□□□□□ -0.05
CCL4L2-215ENST00000620055 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
CCL4L2-215ENST00000620055 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
CCL4L2-215ENST00000620055 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
CCL4L2-215ENST00000620055 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
CCL4L2-215ENST00000620055 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
CCL4L2-215ENST00000620055 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CCL4L2-215ENST00000620055 C19orf67A6NJJ6 358 aa14.48□□□□□ -0.09
CCL4L2-215ENST00000620055 FBLN2P98095 1184 aa14.46□□□□□ -0.09
CCL4L2-215ENST00000620055 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
CCL4L2-215ENST00000620055 GABBR2O75899 941 aa14.44□□□□□ -0.1
CCL4L2-215ENST00000620055 LHX8Q68G74 356 aa14.41□□□□□ -0.1
CCL4L2-215ENST00000620055 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
CCL4L2-215ENST00000620055 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
CCL4L2-215ENST00000620055 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
CCL4L2-215ENST00000620055 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
CCL4L2-215ENST00000620055 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
CCL4L2-215ENST00000620055 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
CCL4L2-215ENST00000620055 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
CCL4L2-215ENST00000620055 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCL4L2-215ENST00000620055 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
CCL4L2-215ENST00000620055 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
CCL4L2-215ENST00000620055 PLSCR2Q9NRY7 297 aa14.02□□□□□ -0.17
CCL4L2-215ENST00000620055 FARP1Q9Y4F1 1045 aaPredicted RBP14.01□□□□□ -0.17
CCL4L2-215ENST00000620055 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
CCL4L2-215ENST00000620055 CLCN6P51797 869 aa13.88□□□□□ -0.19
CCL4L2-215ENST00000620055 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
CCL4L2-215ENST00000620055 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
CCL4L2-215ENST00000620055 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
CCL4L2-215ENST00000620055 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
CCL4L2-215ENST00000620055 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
CCL4L2-215ENST00000620055 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
CCL4L2-215ENST00000620055 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
CCL4L2-215ENST00000620055 POTEMA6NI47 508 aa13.6□□□□□ -0.23
CCL4L2-215ENST00000620055 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
CCL4L2-215ENST00000620055 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
CCL4L2-215ENST00000620055 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
CCL4L2-215ENST00000620055 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
CCL4L2-215ENST00000620055 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
CCL4L2-215ENST00000620055 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
CCL4L2-215ENST00000620055 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
CCL4L2-215ENST00000620055 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
CCL4L2-215ENST00000620055 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCL4L2-215ENST00000620055 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms