RNA–Protein interactions for RNA: ENST00000619992.4

CASP2-207, Transcript of caspase 2, humanhuman

TSL 1 (best) BASIC

Gene CASP2, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP2-207ENST00000619992 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
CASP2-207ENST00000619992 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
CASP2-207ENST00000619992 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
CASP2-207ENST00000619992 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
CASP2-207ENST00000619992 EHMT2Q96KQ7 1210 aa25.02■■□□□ 1.6
CASP2-207ENST00000619992 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
CASP2-207ENST00000619992 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
CASP2-207ENST00000619992 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
CASP2-207ENST00000619992 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
CASP2-207ENST00000619992 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
CASP2-207ENST00000619992 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
CASP2-207ENST00000619992 ABCC9O60706 1549 aa23.88■■□□□ 1.41
CASP2-207ENST00000619992 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
CASP2-207ENST00000619992 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
CASP2-207ENST00000619992 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
CASP2-207ENST00000619992 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
CASP2-207ENST00000619992 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
CASP2-207ENST00000619992 MYO15BQ96JP2 1530 aa23.3■■□□□ 1.32
CASP2-207ENST00000619992 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
CASP2-207ENST00000619992 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
CASP2-207ENST00000619992 HRCP23327 699 aa23.27■■□□□ 1.32
CASP2-207ENST00000619992 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.29
CASP2-207ENST00000619992 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
CASP2-207ENST00000619992 APLP2Q06481 763 aa23■■□□□ 1.27
CASP2-207ENST00000619992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.87■■□□□ 1.25
CASP2-207ENST00000619992 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.25
CASP2-207ENST00000619992 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.24
CASP2-207ENST00000619992 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
CASP2-207ENST00000619992 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
CASP2-207ENST00000619992 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
CASP2-207ENST00000619992 ITGAEP38570 1179 aa22.62■■□□□ 1.21
CASP2-207ENST00000619992 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
CASP2-207ENST00000619992 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
CASP2-207ENST00000619992 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
CASP2-207ENST00000619992 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
CASP2-207ENST00000619992 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
CASP2-207ENST00000619992 NACADO15069 1562 aa22.26■■□□□ 1.15
CASP2-207ENST00000619992 P3H3Q8IVL6 736 aa22.2■■□□□ 1.14
CASP2-207ENST00000619992 WIZO95785 1651 aa22.12■■□□□ 1.13
CASP2-207ENST00000619992 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
CASP2-207ENST00000619992 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
CASP2-207ENST00000619992 SOGA1O94964 1423 aa22.05■■□□□ 1.12
CASP2-207ENST00000619992 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
CASP2-207ENST00000619992 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
CASP2-207ENST00000619992 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
CASP2-207ENST00000619992 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
CASP2-207ENST00000619992 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
CASP2-207ENST00000619992 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
CASP2-207ENST00000619992 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
CASP2-207ENST00000619992 NEUROD1Q13562 356 aa21.86■■□□□ 1.09
CASP2-207ENST00000619992 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
CASP2-207ENST00000619992 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
CASP2-207ENST00000619992 BAZ1BQ9UIG0 1483 aaKnown RBP21.78■■□□□ 1.08
CASP2-207ENST00000619992 CLIP1P30622 1438 aa21.73■■□□□ 1.07
CASP2-207ENST00000619992 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
CASP2-207ENST00000619992 FBLN2P98095 1184 aa21.66■■□□□ 1.06
CASP2-207ENST00000619992 GTF3C3Q9Y5Q9 886 aa21.65■■□□□ 1.06
CASP2-207ENST00000619992 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
CASP2-207ENST00000619992 GOLGA3Q08378 1498 aa21.59■■□□□ 1.05
CASP2-207ENST00000619992 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
CASP2-207ENST00000619992 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
CASP2-207ENST00000619992 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
CASP2-207ENST00000619992 HIRIP3Q9BW71 556 aaPredicted RBP21.52■■□□□ 1.04
CASP2-207ENST00000619992 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
CASP2-207ENST00000619992 KANK4Q5T7N3 995 aaPredicted RBP21.48■■□□□ 1.03
CASP2-207ENST00000619992 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
CASP2-207ENST00000619992 MIER1Q8N108 512 aa21.45■■□□□ 1.02
CASP2-207ENST00000619992 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
CASP2-207ENST00000619992 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
CASP2-207ENST00000619992 EEA1Q15075 1411 aa21.43■■□□□ 1.02
CASP2-207ENST00000619992 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
CASP2-207ENST00000619992 CEP164Q9UPV0 1460 aa21.41■■□□□ 1.02
CASP2-207ENST00000619992 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
CASP2-207ENST00000619992 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
CASP2-207ENST00000619992 BCANQ96GW7 911 aa21.34■■□□□ 1.01
CASP2-207ENST00000619992 ZNF326Q5BKZ1 582 aaKnown RBP21.32■■□□□ 1
CASP2-207ENST00000619992 KIF27Q86VH2 1401 aa21.31■■□□□ 1
CASP2-207ENST00000619992 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
CASP2-207ENST00000619992 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
CASP2-207ENST00000619992 CUX2O14529 1486 aa21.27■■□□□ 1
CASP2-207ENST00000619992 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
CASP2-207ENST00000619992 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
CASP2-207ENST00000619992 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
CASP2-207ENST00000619992 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
CASP2-207ENST00000619992 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
CASP2-207ENST00000619992 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
CASP2-207ENST00000619992 NEFLP07196 543 aa21.16■□□□□ 0.98
CASP2-207ENST00000619992 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.97
CASP2-207ENST00000619992 MTUS2Q5JR59 1369 aa21.12■□□□□ 0.97
CASP2-207ENST00000619992 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
CASP2-207ENST00000619992 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
CASP2-207ENST00000619992 BICRAQ9NZM4 1560 aa21.05■□□□□ 0.96
CASP2-207ENST00000619992 SENP3-EIF4A1A0A087X0R7 540 aa21.04■□□□□ 0.96
CASP2-207ENST00000619992 ANP32CO43423 234 aa21.01■□□□□ 0.95
CASP2-207ENST00000619992 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
CASP2-207ENST00000619992 CADPSQ9ULU8 1353 aa21■□□□□ 0.95
CASP2-207ENST00000619992 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
CASP2-207ENST00000619992 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
CASP2-207ENST00000619992 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
CASP2-207ENST00000619992 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms