RNA–Protein interactions for RNA: ENST00000619895.4

TMC4-210, Transcript of transmembrane channel like 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMC4, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-210ENST00000619895 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
TMC4-210ENST00000619895 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
TMC4-210ENST00000619895 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
TMC4-210ENST00000619895 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
TMC4-210ENST00000619895 DCAF8L2P0C7V8 631 aa28.73■■■□□ 2.19
TMC4-210ENST00000619895 ABCC9O60706 1549 aa28.32■■■□□ 2.12
TMC4-210ENST00000619895 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
TMC4-210ENST00000619895 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
TMC4-210ENST00000619895 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
TMC4-210ENST00000619895 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
TMC4-210ENST00000619895 NACADO15069 1562 aa27.46■■□□□ 1.99
TMC4-210ENST00000619895 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
TMC4-210ENST00000619895 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
TMC4-210ENST00000619895 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
TMC4-210ENST00000619895 CECR2Q9BXF3 1484 aa26.88■■□□□ 1.89
TMC4-210ENST00000619895 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
TMC4-210ENST00000619895 UNC13AQ9UPW8 1703 aa26.72■■□□□ 1.87
TMC4-210ENST00000619895 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
TMC4-210ENST00000619895 WIZO95785 1651 aa26.56■■□□□ 1.84
TMC4-210ENST00000619895 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
TMC4-210ENST00000619895 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
TMC4-210ENST00000619895 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
TMC4-210ENST00000619895 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
TMC4-210ENST00000619895 LOC105371045A0A1W2PR82 267 aa26.2■■□□□ 1.79
TMC4-210ENST00000619895 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
TMC4-210ENST00000619895 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
TMC4-210ENST00000619895 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
TMC4-210ENST00000619895 SMARCA2P51531 1590 aa25.97■■□□□ 1.75
TMC4-210ENST00000619895 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
TMC4-210ENST00000619895 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
TMC4-210ENST00000619895 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
TMC4-210ENST00000619895 HRCP23327 699 aa25.76■■□□□ 1.71
TMC4-210ENST00000619895 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.71
TMC4-210ENST00000619895 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
TMC4-210ENST00000619895 BAZ1BQ9UIG0 1483 aaKnown RBP25.7■■□□□ 1.7
TMC4-210ENST00000619895 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
TMC4-210ENST00000619895 PCGF6Q9BYE7 350 aa25.59■■□□□ 1.69
TMC4-210ENST00000619895 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.68
TMC4-210ENST00000619895 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
TMC4-210ENST00000619895 WRNQ14191 1432 aaPredicted RBP eCLIP25.4■■□□□ 1.66
TMC4-210ENST00000619895 SOGA1O94964 1423 aa25.39■■□□□ 1.66
TMC4-210ENST00000619895 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
TMC4-210ENST00000619895 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
TMC4-210ENST00000619895 SYNJ1O43426 1573 aa25.28■■□□□ 1.64
TMC4-210ENST00000619895 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
TMC4-210ENST00000619895 CSRNP3Q8WYN3 585 aa25.22■■□□□ 1.63
TMC4-210ENST00000619895 EEA1Q15075 1411 aa25.16■■□□□ 1.62
TMC4-210ENST00000619895 UBTFP17480 764 aaKnown RBP25.08■■□□□ 1.6
TMC4-210ENST00000619895 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
TMC4-210ENST00000619895 CFTRP13569 1480 aa25.04■■□□□ 1.6
TMC4-210ENST00000619895 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
TMC4-210ENST00000619895 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
TMC4-210ENST00000619895 CEP162Q5TB80 1403 aa24.99■■□□□ 1.59
TMC4-210ENST00000619895 GOLGA3Q08378 1498 aa24.97■■□□□ 1.59
TMC4-210ENST00000619895 BIVM-ERCC5R4GMW8 1640 aa24.95■■□□□ 1.58
TMC4-210ENST00000619895 CUX1P39880 1505 aa24.91■■□□□ 1.58
TMC4-210ENST00000619895 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.57
TMC4-210ENST00000619895 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
TMC4-210ENST00000619895 KIF21BO75037 1637 aa24.84■■□□□ 1.57
TMC4-210ENST00000619895 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
TMC4-210ENST00000619895 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
TMC4-210ENST00000619895 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
TMC4-210ENST00000619895 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
TMC4-210ENST00000619895 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
TMC4-210ENST00000619895 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
TMC4-210ENST00000619895 CLIP1P30622 1438 aa24.67■■□□□ 1.54
TMC4-210ENST00000619895 NESP48681 1621 aa24.64■■□□□ 1.54
TMC4-210ENST00000619895 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
TMC4-210ENST00000619895 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
TMC4-210ENST00000619895 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
TMC4-210ENST00000619895 CUX2O14529 1486 aa24.56■■□□□ 1.52
TMC4-210ENST00000619895 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
TMC4-210ENST00000619895 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
TMC4-210ENST00000619895 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
TMC4-210ENST00000619895 IGF1RP08069 1367 aa24.46■■□□□ 1.51
TMC4-210ENST00000619895 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
TMC4-210ENST00000619895 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
TMC4-210ENST00000619895 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
TMC4-210ENST00000619895 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
TMC4-210ENST00000619895 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
TMC4-210ENST00000619895 APLP2Q06481 763 aa24.38■■□□□ 1.49
TMC4-210ENST00000619895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
TMC4-210ENST00000619895 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
TMC4-210ENST00000619895 CARMIL1Q5VZK9 1371 aa24.35■■□□□ 1.49
TMC4-210ENST00000619895 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
TMC4-210ENST00000619895 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
TMC4-210ENST00000619895 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
TMC4-210ENST00000619895 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
TMC4-210ENST00000619895 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
TMC4-210ENST00000619895 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
TMC4-210ENST00000619895 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
TMC4-210ENST00000619895 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
TMC4-210ENST00000619895 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
TMC4-210ENST00000619895 KANK4Q5T7N3 995 aaPredicted RBP24.14■■□□□ 1.46
TMC4-210ENST00000619895 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
TMC4-210ENST00000619895 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
TMC4-210ENST00000619895 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
TMC4-210ENST00000619895 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
TMC4-210ENST00000619895 CUL7Q14999 1698 aa24.04■■□□□ 1.44
TMC4-210ENST00000619895 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 393.4 ms