RNA–Protein interactions for RNA: ENST00000619710.4

PARVB-210, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-210ENST00000619710 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
PARVB-210ENST00000619710 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
PARVB-210ENST00000619710 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
PARVB-210ENST00000619710 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.36
PARVB-210ENST00000619710 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
PARVB-210ENST00000619710 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
PARVB-210ENST00000619710 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
PARVB-210ENST00000619710 ABCC9O60706 1549 aa29.13■■■□□ 2.25
PARVB-210ENST00000619710 NACADO15069 1562 aa28.99■■■□□ 2.23
PARVB-210ENST00000619710 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
PARVB-210ENST00000619710 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
PARVB-210ENST00000619710 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
PARVB-210ENST00000619710 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.07
PARVB-210ENST00000619710 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
PARVB-210ENST00000619710 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.05
PARVB-210ENST00000619710 BAZ1AQ9NRL2 1556 aaPredicted RBP27.72■■■□□ 2.03
PARVB-210ENST00000619710 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
PARVB-210ENST00000619710 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
PARVB-210ENST00000619710 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
PARVB-210ENST00000619710 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
PARVB-210ENST00000619710 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
PARVB-210ENST00000619710 WIZO95785 1651 aa27.45■■□□□ 1.99
PARVB-210ENST00000619710 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
PARVB-210ENST00000619710 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
PARVB-210ENST00000619710 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
PARVB-210ENST00000619710 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
PARVB-210ENST00000619710 CCDC88BA6NC98 1476 aa27.01■■□□□ 1.91
PARVB-210ENST00000619710 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
PARVB-210ENST00000619710 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
PARVB-210ENST00000619710 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
PARVB-210ENST00000619710 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
PARVB-210ENST00000619710 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
PARVB-210ENST00000619710 LOC105371045A0A1W2PR82 267 aa26.49■■□□□ 1.83
PARVB-210ENST00000619710 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
PARVB-210ENST00000619710 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
PARVB-210ENST00000619710 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
PARVB-210ENST00000619710 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
PARVB-210ENST00000619710 EEA1Q15075 1411 aa26.26■■□□□ 1.79
PARVB-210ENST00000619710 CFTRP13569 1480 aa26.25■■□□□ 1.79
PARVB-210ENST00000619710 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
PARVB-210ENST00000619710 CADPSQ9ULU8 1353 aa26.13■■□□□ 1.77
PARVB-210ENST00000619710 SOGA1O94964 1423 aa26.08■■□□□ 1.77
PARVB-210ENST00000619710 TOP2BQ02880 1626 aa26.06■■□□□ 1.76
PARVB-210ENST00000619710 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
PARVB-210ENST00000619710 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
PARVB-210ENST00000619710 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
PARVB-210ENST00000619710 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
PARVB-210ENST00000619710 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
PARVB-210ENST00000619710 CUX1P39880 1505 aa25.9■■□□□ 1.74
PARVB-210ENST00000619710 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
PARVB-210ENST00000619710 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
PARVB-210ENST00000619710 CEP164Q9UPV0 1460 aa25.81■■□□□ 1.72
PARVB-210ENST00000619710 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
PARVB-210ENST00000619710 KIF21BO75037 1637 aa25.77■■□□□ 1.72
PARVB-210ENST00000619710 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
PARVB-210ENST00000619710 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
PARVB-210ENST00000619710 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
PARVB-210ENST00000619710 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
PARVB-210ENST00000619710 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
PARVB-210ENST00000619710 PCGF6Q9BYE7 350 aa25.65■■□□□ 1.7
PARVB-210ENST00000619710 NESP48681 1621 aa25.65■■□□□ 1.7
PARVB-210ENST00000619710 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PARVB-210ENST00000619710 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
PARVB-210ENST00000619710 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
PARVB-210ENST00000619710 PRXQ9BXM0 1461 aa25.58■■□□□ 1.69
PARVB-210ENST00000619710 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
PARVB-210ENST00000619710 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
PARVB-210ENST00000619710 RAPGEF2Q9Y4G8 1499 aa25.54■■□□□ 1.68
PARVB-210ENST00000619710 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
PARVB-210ENST00000619710 CUX2O14529 1486 aa25.51■■□□□ 1.67
PARVB-210ENST00000619710 IGF1RP08069 1367 aa25.44■■□□□ 1.66
PARVB-210ENST00000619710 CLIP1P30622 1438 aa25.43■■□□□ 1.66
PARVB-210ENST00000619710 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
PARVB-210ENST00000619710 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
PARVB-210ENST00000619710 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
PARVB-210ENST00000619710 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
PARVB-210ENST00000619710 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
PARVB-210ENST00000619710 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
PARVB-210ENST00000619710 VPS8Q8N3P4 1428 aa25.25■■□□□ 1.63
PARVB-210ENST00000619710 HRCP23327 699 aa25.22■■□□□ 1.63
PARVB-210ENST00000619710 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
PARVB-210ENST00000619710 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
PARVB-210ENST00000619710 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
PARVB-210ENST00000619710 CUL7Q14999 1698 aa25.14■■□□□ 1.62
PARVB-210ENST00000619710 APLP2Q06481 763 aa25.13■■□□□ 1.61
PARVB-210ENST00000619710 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
PARVB-210ENST00000619710 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
PARVB-210ENST00000619710 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
PARVB-210ENST00000619710 ABCA5Q8WWZ7 1642 aa25.09■■□□□ 1.61
PARVB-210ENST00000619710 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
PARVB-210ENST00000619710 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
PARVB-210ENST00000619710 WDR62O43379 1518 aa25.04■■□□□ 1.6
PARVB-210ENST00000619710 ARHGAP35Q9NRY4 1499 aa25.02■■□□□ 1.6
PARVB-210ENST00000619710 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
PARVB-210ENST00000619710 IFT140Q96RY7 1462 aa25■■□□□ 1.59
PARVB-210ENST00000619710 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
PARVB-210ENST00000619710 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
PARVB-210ENST00000619710 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
PARVB-210ENST00000619710 FHAD1B1AJZ9 1412 aa24.88■■□□□ 1.57
PARVB-210ENST00000619710 EFCAB5A4FU69 1503 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms