RNA–Protein interactions for RNA: ENST00000619041.1

AC090527.3-201, humanhuman

BASIC

Gene AC090527.3, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090527.3-201ENST00000619041 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
AC090527.3-201ENST00000619041 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
AC090527.3-201ENST00000619041 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
AC090527.3-201ENST00000619041 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
AC090527.3-201ENST00000619041 FOXD1Q16676 465 aa16.96■□□□□ 0.31
AC090527.3-201ENST00000619041 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
AC090527.3-201ENST00000619041 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
AC090527.3-201ENST00000619041 ADRA2BP18089 450 aa15.97■□□□□ 0.15
AC090527.3-201ENST00000619041 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
AC090527.3-201ENST00000619041 MSH5O43196 834 aa15.75■□□□□ 0.11
AC090527.3-201ENST00000619041 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
AC090527.3-201ENST00000619041 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
AC090527.3-201ENST00000619041 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
AC090527.3-201ENST00000619041 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
AC090527.3-201ENST00000619041 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
AC090527.3-201ENST00000619041 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
AC090527.3-201ENST00000619041 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
AC090527.3-201ENST00000619041 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
AC090527.3-201ENST00000619041 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
AC090527.3-201ENST00000619041 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
AC090527.3-201ENST00000619041 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
AC090527.3-201ENST00000619041 KCNA4P22459 653 aa13.68□□□□□ -0.22
AC090527.3-201ENST00000619041 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
AC090527.3-201ENST00000619041 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
AC090527.3-201ENST00000619041 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
AC090527.3-201ENST00000619041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC090527.3-201ENST00000619041 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
AC090527.3-201ENST00000619041 NISCHQ9Y2I1 1504 aa13.23□□□□□ -0.29
AC090527.3-201ENST00000619041 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
AC090527.3-201ENST00000619041 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
AC090527.3-201ENST00000619041 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
AC090527.3-201ENST00000619041 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
AC090527.3-201ENST00000619041 CAPN15O75808 1086 aa12.8□□□□□ -0.36
AC090527.3-201ENST00000619041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
AC090527.3-201ENST00000619041 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
AC090527.3-201ENST00000619041 DSG3P32926 999 aa12.7□□□□□ -0.38
AC090527.3-201ENST00000619041 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
AC090527.3-201ENST00000619041 APLP2Q06481 763 aa12.69□□□□□ -0.38
AC090527.3-201ENST00000619041 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
AC090527.3-201ENST00000619041 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
AC090527.3-201ENST00000619041 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
AC090527.3-201ENST00000619041 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
AC090527.3-201ENST00000619041 ZBTB22O15209 634 aa12.59□□□□□ -0.39
AC090527.3-201ENST00000619041 ABCB7O75027 752 aa12.54□□□□□ -0.4
AC090527.3-201ENST00000619041 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
AC090527.3-201ENST00000619041 POLA2Q14181 598 aa12.38□□□□□ -0.43
AC090527.3-201ENST00000619041 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
AC090527.3-201ENST00000619041 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
AC090527.3-201ENST00000619041 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
AC090527.3-201ENST00000619041 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
AC090527.3-201ENST00000619041 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
AC090527.3-201ENST00000619041 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
AC090527.3-201ENST00000619041 FBLN2P98095 1184 aa11.87□□□□□ -0.51
AC090527.3-201ENST00000619041 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
AC090527.3-201ENST00000619041 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
AC090527.3-201ENST00000619041 POTEHQ6S545 545 aa11.85□□□□□ -0.51
AC090527.3-201ENST00000619041 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
AC090527.3-201ENST00000619041 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
AC090527.3-201ENST00000619041 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
AC090527.3-201ENST00000619041 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
AC090527.3-201ENST00000619041 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
AC090527.3-201ENST00000619041 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
AC090527.3-201ENST00000619041 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
AC090527.3-201ENST00000619041 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
AC090527.3-201ENST00000619041 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
AC090527.3-201ENST00000619041 PIP4P2Q8N4L2 257 aa11.53□□□□□ -0.56
AC090527.3-201ENST00000619041 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC090527.3-201ENST00000619041 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
AC090527.3-201ENST00000619041 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
AC090527.3-201ENST00000619041 SPDYE1Q8NFV5 336 aaPredicted RBP11.48□□□□□ -0.57
AC090527.3-201ENST00000619041 ABCC9O60706 1549 aa11.42□□□□□ -0.58
AC090527.3-201ENST00000619041 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
AC090527.3-201ENST00000619041 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
AC090527.3-201ENST00000619041 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
AC090527.3-201ENST00000619041 HAX1O00165 279 aa11.27□□□□□ -0.61
AC090527.3-201ENST00000619041 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
AC090527.3-201ENST00000619041 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
AC090527.3-201ENST00000619041 EVX2Q03828 476 aa11.19□□□□□ -0.62
AC090527.3-201ENST00000619041 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
AC090527.3-201ENST00000619041 MYO15BQ96JP2 1530 aa11.14□□□□□ -0.63
AC090527.3-201ENST00000619041 PROM2Q8N271 834 aa11.14□□□□□ -0.63
AC090527.3-201ENST00000619041 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
AC090527.3-201ENST00000619041 NACADO15069 1562 aa11.11□□□□□ -0.63
AC090527.3-201ENST00000619041 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
AC090527.3-201ENST00000619041 RB1CC1Q8TDY2 1594 aa11.1□□□□□ -0.63
AC090527.3-201ENST00000619041 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
AC090527.3-201ENST00000619041 ZCCHC6Q5VYS8 1495 aaKnown RBP11.06□□□□□ -0.64
AC090527.3-201ENST00000619041 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
AC090527.3-201ENST00000619041 FKBP8Q14318 412 aa11.01□□□□□ -0.65
AC090527.3-201ENST00000619041 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
AC090527.3-201ENST00000619041 MNX1P50219 401 aaPredicted RBP10.94□□□□□ -0.66
AC090527.3-201ENST00000619041 GABBR2O75899 941 aa10.91□□□□□ -0.66
AC090527.3-201ENST00000619041 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
AC090527.3-201ENST00000619041 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
AC090527.3-201ENST00000619041 MIER1Q8N108 512 aa10.84□□□□□ -0.67
AC090527.3-201ENST00000619041 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
AC090527.3-201ENST00000619041 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
AC090527.3-201ENST00000619041 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
AC090527.3-201ENST00000619041 BICRAQ9NZM4 1560 aa10.78□□□□□ -0.68
AC090527.3-201ENST00000619041 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms