RNA–Protein interactions for RNA: ENST00000618523.1

U6.48-201, humanhuman

BASIC

Gene U6, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.48-201ENST00000618523 AEBP2Q6ZN18 517 aaPredicted RBP31.42■■■□□ 2.62
U6.48-201ENST00000618523 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
U6.48-201ENST00000618523 SENP3Q9H4L4 574 aaPredicted RBP26.66■■□□□ 1.86
U6.48-201ENST00000618523 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
U6.48-201ENST00000618523 FOXD1Q16676 465 aa24.89■■□□□ 1.58
U6.48-201ENST00000618523 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
U6.48-201ENST00000618523 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
U6.48-201ENST00000618523 ADRA2BP18089 450 aa23.46■■□□□ 1.35
U6.48-201ENST00000618523 PIAS4Q8N2W9 510 aaPredicted RBP23.34■■□□□ 1.33
U6.48-201ENST00000618523 MSH5O43196 834 aa23.11■■□□□ 1.29
U6.48-201ENST00000618523 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
U6.48-201ENST00000618523 MAPK8IP2Q13387 824 aaPredicted RBP21.49■■□□□ 1.03
U6.48-201ENST00000618523 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
U6.48-201ENST00000618523 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
U6.48-201ENST00000618523 PPP4R3CPQ6ZMV5 832 aa21.17■□□□□ 0.98
U6.48-201ENST00000618523 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
U6.48-201ENST00000618523 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
U6.48-201ENST00000618523 DCAF8L1A6NGE4 600 aa20.45■□□□□ 0.86
U6.48-201ENST00000618523 RNF216Q9NWF9 866 aaPredicted RBP20.4■□□□□ 0.86
U6.48-201ENST00000618523 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
U6.48-201ENST00000618523 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
U6.48-201ENST00000618523 KCNA4P22459 653 aa20.03■□□□□ 0.8
U6.48-201ENST00000618523 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
U6.48-201ENST00000618523 CACNB1Q02641 598 aaPredicted RBP19.76■□□□□ 0.75
U6.48-201ENST00000618523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
U6.48-201ENST00000618523 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
U6.48-201ENST00000618523 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
U6.48-201ENST00000618523 U3KPZ7 1027 aaPredicted RBP19.22■□□□□ 0.67
U6.48-201ENST00000618523 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
U6.48-201ENST00000618523 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
U6.48-201ENST00000618523 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
U6.48-201ENST00000618523 CAPN15O75808 1086 aa18.85■□□□□ 0.61
U6.48-201ENST00000618523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
U6.48-201ENST00000618523 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
U6.48-201ENST00000618523 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
U6.48-201ENST00000618523 DSG3P32926 999 aa18.62■□□□□ 0.57
U6.48-201ENST00000618523 MYCNP04198 464 aaPredicted RBP18.59■□□□□ 0.57
U6.48-201ENST00000618523 APLP2Q06481 763 aa18.58■□□□□ 0.56
U6.48-201ENST00000618523 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
U6.48-201ENST00000618523 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
U6.48-201ENST00000618523 ABCB7O75027 752 aa18.49■□□□□ 0.55
U6.48-201ENST00000618523 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
U6.48-201ENST00000618523 ZBTB22O15209 634 aa18.45■□□□□ 0.54
U6.48-201ENST00000618523 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
U6.48-201ENST00000618523 POLA2Q14181 598 aa18.14■□□□□ 0.49
U6.48-201ENST00000618523 ATXN8OSP0DMR3 200 aa17.86■□□□□ 0.45
U6.48-201ENST00000618523 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
U6.48-201ENST00000618523 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
U6.48-201ENST00000618523 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
U6.48-201ENST00000618523 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
U6.48-201ENST00000618523 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
U6.48-201ENST00000618523 POTEHQ6S545 545 aa17.45■□□□□ 0.38
U6.48-201ENST00000618523 FBLN2P98095 1184 aa17.42■□□□□ 0.38
U6.48-201ENST00000618523 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
U6.48-201ENST00000618523 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
U6.48-201ENST00000618523 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
U6.48-201ENST00000618523 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
U6.48-201ENST00000618523 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
U6.48-201ENST00000618523 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
U6.48-201ENST00000618523 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
U6.48-201ENST00000618523 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
U6.48-201ENST00000618523 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
U6.48-201ENST00000618523 SSUH2Q9Y2M2 353 aa17.01■□□□□ 0.31
U6.48-201ENST00000618523 PIP4P2Q8N4L2 257 aa16.94■□□□□ 0.3
U6.48-201ENST00000618523 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
U6.48-201ENST00000618523 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
U6.48-201ENST00000618523 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
U6.48-201ENST00000618523 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
U6.48-201ENST00000618523 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
U6.48-201ENST00000618523 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
U6.48-201ENST00000618523 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
U6.48-201ENST00000618523 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
U6.48-201ENST00000618523 HAX1O00165 279 aa16.58■□□□□ 0.24
U6.48-201ENST00000618523 SP7Q8TDD2 431 aaPredicted RBP16.47■□□□□ 0.23
U6.48-201ENST00000618523 EVX2Q03828 476 aa16.43■□□□□ 0.22
U6.48-201ENST00000618523 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
U6.48-201ENST00000618523 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
U6.48-201ENST00000618523 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
U6.48-201ENST00000618523 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
U6.48-201ENST00000618523 PROM2Q8N271 834 aa16.23■□□□□ 0.19
U6.48-201ENST00000618523 FKBP8Q14318 412 aa16.16■□□□□ 0.18
U6.48-201ENST00000618523 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
U6.48-201ENST00000618523 GABBR2O75899 941 aa16.02■□□□□ 0.16
U6.48-201ENST00000618523 MNX1P50219 401 aaPredicted RBP15.99■□□□□ 0.15
U6.48-201ENST00000618523 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
U6.48-201ENST00000618523 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
U6.48-201ENST00000618523 MIER1Q8N108 512 aa15.88■□□□□ 0.13
U6.48-201ENST00000618523 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
U6.48-201ENST00000618523 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
U6.48-201ENST00000618523 PHF12Q96QT6 1004 aa15.81■□□□□ 0.12
U6.48-201ENST00000618523 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
U6.48-201ENST00000618523 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
U6.48-201ENST00000618523 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
U6.48-201ENST00000618523 GALR2O43603 387 aaPredicted RBP15.72■□□□□ 0.11
U6.48-201ENST00000618523 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
U6.48-201ENST00000618523 CLCN6P51797 869 aa15.67■□□□□ 0.1
U6.48-201ENST00000618523 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
U6.48-201ENST00000618523 DCBLD2Q96PD2 775 aa15.65■□□□□ 0.1
U6.48-201ENST00000618523 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
U6.48-201ENST00000618523 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms