RNA–Protein interactions for RNA: ENST00000617928.4

CYFIP1-208, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP1, Length 6,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-208ENST00000617928 DCAF8L2P0C7V8 631 aa15.28■□□□□ 0.04
CYFIP1-208ENST00000617928 NISCHQ9Y2I1 1504 aa14.39□□□□□ -0.11
CYFIP1-208ENST00000617928 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
CYFIP1-208ENST00000617928 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
CYFIP1-208ENST00000617928 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
CYFIP1-208ENST00000617928 APLP2Q06481 763 aa13.74□□□□□ -0.21
CYFIP1-208ENST00000617928 FAM9AQ8IZU1 332 aaPredicted RBP13.72□□□□□ -0.21
CYFIP1-208ENST00000617928 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
CYFIP1-208ENST00000617928 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
CYFIP1-208ENST00000617928 MYT1Q01538 1121 aa13.51□□□□□ -0.25
CYFIP1-208ENST00000617928 RANGAP1P46060 587 aaPredicted RBP13.49□□□□□ -0.25
CYFIP1-208ENST00000617928 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
CYFIP1-208ENST00000617928 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
CYFIP1-208ENST00000617928 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
CYFIP1-208ENST00000617928 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
CYFIP1-208ENST00000617928 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
CYFIP1-208ENST00000617928 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
CYFIP1-208ENST00000617928 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
CYFIP1-208ENST00000617928 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
CYFIP1-208ENST00000617928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
CYFIP1-208ENST00000617928 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
CYFIP1-208ENST00000617928 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
CYFIP1-208ENST00000617928 NEFLP07196 543 aa12.93□□□□□ -0.34
CYFIP1-208ENST00000617928 YTHDC1Q96MU7 727 aaKnown RBP12.89□□□□□ -0.35
CYFIP1-208ENST00000617928 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
CYFIP1-208ENST00000617928 ZEB1P37275 1124 aaPredicted RBP12.83□□□□□ -0.36
CYFIP1-208ENST00000617928 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
CYFIP1-208ENST00000617928 ITGAEP38570 1179 aa12.79□□□□□ -0.36
CYFIP1-208ENST00000617928 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
CYFIP1-208ENST00000617928 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
CYFIP1-208ENST00000617928 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
CYFIP1-208ENST00000617928 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
CYFIP1-208ENST00000617928 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
CYFIP1-208ENST00000617928 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
CYFIP1-208ENST00000617928 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
CYFIP1-208ENST00000617928 BCANQ96GW7 911 aa12.39□□□□□ -0.43
CYFIP1-208ENST00000617928 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
CYFIP1-208ENST00000617928 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
CYFIP1-208ENST00000617928 FBLN2P98095 1184 aa12.37□□□□□ -0.43
CYFIP1-208ENST00000617928 BCL11AQ9H165 835 aa12.34□□□□□ -0.43
CYFIP1-208ENST00000617928 ABCC9O60706 1549 aa12.32□□□□□ -0.44
CYFIP1-208ENST00000617928 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
CYFIP1-208ENST00000617928 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
CYFIP1-208ENST00000617928 LOC105371045A0A1W2PR82 267 aa12.29□□□□□ -0.44
CYFIP1-208ENST00000617928 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
CYFIP1-208ENST00000617928 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
CYFIP1-208ENST00000617928 RTL5Q5HYW3 569 aaPredicted RBP12.25□□□□□ -0.45
CYFIP1-208ENST00000617928 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
CYFIP1-208ENST00000617928 HRCP23327 699 aa12.24□□□□□ -0.45
CYFIP1-208ENST00000617928 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
CYFIP1-208ENST00000617928 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
CYFIP1-208ENST00000617928 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
CYFIP1-208ENST00000617928 NEFMP07197 916 aa12.17□□□□□ -0.46
CYFIP1-208ENST00000617928 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
CYFIP1-208ENST00000617928 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
CYFIP1-208ENST00000617928 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
CYFIP1-208ENST00000617928 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
CYFIP1-208ENST00000617928 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
CYFIP1-208ENST00000617928 ANP32CO43423 234 aa12.05□□□□□ -0.48
CYFIP1-208ENST00000617928 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-208ENST00000617928 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
CYFIP1-208ENST00000617928 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
CYFIP1-208ENST00000617928 ZCCHC6Q5VYS8 1495 aaKnown RBP11.97□□□□□ -0.49
CYFIP1-208ENST00000617928 A0A0G2JS52 829 aa11.96□□□□□ -0.49
CYFIP1-208ENST00000617928 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.5
CYFIP1-208ENST00000617928 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
CYFIP1-208ENST00000617928 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
CYFIP1-208ENST00000617928 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
CYFIP1-208ENST00000617928 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
CYFIP1-208ENST00000617928 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
CYFIP1-208ENST00000617928 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
CYFIP1-208ENST00000617928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.521e-6■■□□□ 13.8
CYFIP1-208ENST00000617928 RB1CC1Q8TDY2 1594 aa11.82□□□□□ -0.52
CYFIP1-208ENST00000617928 SENP3Q9H4L4 574 aaPredicted RBP11.81□□□□□ -0.52
CYFIP1-208ENST00000617928 NACADO15069 1562 aa11.79□□□□□ -0.52
CYFIP1-208ENST00000617928 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
CYFIP1-208ENST00000617928 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
CYFIP1-208ENST00000617928 C14orf37Q86TY3 774 aa11.77□□□□□ -0.53
CYFIP1-208ENST00000617928 ANP32BQ92688 251 aaKnown RBP11.76□□□□□ -0.53
CYFIP1-208ENST00000617928 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
CYFIP1-208ENST00000617928 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
CYFIP1-208ENST00000617928 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
CYFIP1-208ENST00000617928 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
CYFIP1-208ENST00000617928 CDK11BP21127 795 aaKnown RBP11.7□□□□□ -0.54
CYFIP1-208ENST00000617928 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
CYFIP1-208ENST00000617928 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
CYFIP1-208ENST00000617928 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
CYFIP1-208ENST00000617928 TONSLQ96HA7 1378 aa11.68□□□□□ -0.54
CYFIP1-208ENST00000617928 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
CYFIP1-208ENST00000617928 PPP1R15AO75807 674 aaPredicted RBP11.67□□□□□ -0.54
CYFIP1-208ENST00000617928 ARXQ96QS3 562 aa11.67□□□□□ -0.54
CYFIP1-208ENST00000617928 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
CYFIP1-208ENST00000617928 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
CYFIP1-208ENST00000617928 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
CYFIP1-208ENST00000617928 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
CYFIP1-208ENST00000617928 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
CYFIP1-208ENST00000617928 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
CYFIP1-208ENST00000617928 TSPY4P0CV99 314 aa11.62□□□□□ -0.55
CYFIP1-208ENST00000617928 TSPY10P0CW01 314 aa11.62□□□□□ -0.55
CYFIP1-208ENST00000617928 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms