RNA–Protein interactions for RNA: ENST00000617760.4

LRRC41-208, Transcript of leucine rich repeat containing 41, humanhuman

TSL 5 BASIC

Gene LRRC41, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-208ENST00000617760 NISCHQ9Y2I1 1504 aa30.1■■■□□ 2.41
LRRC41-208ENST00000617760 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
LRRC41-208ENST00000617760 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
LRRC41-208ENST00000617760 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
LRRC41-208ENST00000617760 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
LRRC41-208ENST00000617760 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
LRRC41-208ENST00000617760 PELP1Q8IZL8 1130 aaKnown RBP24.4■■□□□ 1.5
LRRC41-208ENST00000617760 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
LRRC41-208ENST00000617760 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
LRRC41-208ENST00000617760 MYT1Q01538 1121 aa24.01■■□□□ 1.43
LRRC41-208ENST00000617760 ABCC9O60706 1549 aa23.99■■□□□ 1.43
LRRC41-208ENST00000617760 NACADO15069 1562 aa23.99■■□□□ 1.43
LRRC41-208ENST00000617760 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
LRRC41-208ENST00000617760 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
LRRC41-208ENST00000617760 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
LRRC41-208ENST00000617760 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
LRRC41-208ENST00000617760 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
LRRC41-208ENST00000617760 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
LRRC41-208ENST00000617760 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
LRRC41-208ENST00000617760 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
LRRC41-208ENST00000617760 WIZO95785 1651 aa23.15■■□□□ 1.3
LRRC41-208ENST00000617760 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
LRRC41-208ENST00000617760 TTBK1Q5TCY1 1321 aaPredicted RBP23■■□□□ 1.27
LRRC41-208ENST00000617760 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
LRRC41-208ENST00000617760 HRCP23327 699 aa22.95■■□□□ 1.26
LRRC41-208ENST00000617760 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.25
LRRC41-208ENST00000617760 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.24
LRRC41-208ENST00000617760 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
LRRC41-208ENST00000617760 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
LRRC41-208ENST00000617760 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
LRRC41-208ENST00000617760 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
LRRC41-208ENST00000617760 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
LRRC41-208ENST00000617760 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
LRRC41-208ENST00000617760 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
LRRC41-208ENST00000617760 FAM9AQ8IZU1 332 aaPredicted RBP22.44■■□□□ 1.18
LRRC41-208ENST00000617760 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
LRRC41-208ENST00000617760 PCGF6Q9BYE7 350 aa22.38■■□□□ 1.17
LRRC41-208ENST00000617760 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
LRRC41-208ENST00000617760 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
LRRC41-208ENST00000617760 TRIM26Q12899 539 aaPredicted RBP22.19■■□□□ 1.14
LRRC41-208ENST00000617760 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
LRRC41-208ENST00000617760 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
LRRC41-208ENST00000617760 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
LRRC41-208ENST00000617760 EEA1Q15075 1411 aa22.15■■□□□ 1.14
LRRC41-208ENST00000617760 SOGA1O94964 1423 aa22.14■■□□□ 1.13
LRRC41-208ENST00000617760 EHMT2Q96KQ7 1210 aa22.11■■□□□ 1.13
LRRC41-208ENST00000617760 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
LRRC41-208ENST00000617760 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
LRRC41-208ENST00000617760 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
LRRC41-208ENST00000617760 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
LRRC41-208ENST00000617760 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.11
LRRC41-208ENST00000617760 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
LRRC41-208ENST00000617760 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
LRRC41-208ENST00000617760 CEP162Q5TB80 1403 aa21.9■■□□□ 1.1
LRRC41-208ENST00000617760 GOLGA3Q08378 1498 aa21.89■■□□□ 1.09
LRRC41-208ENST00000617760 KIF21BO75037 1637 aa21.87■■□□□ 1.09
LRRC41-208ENST00000617760 CFTRP13569 1480 aa21.86■■□□□ 1.09
LRRC41-208ENST00000617760 PRKCSHP14314 528 aaPredicted RBP21.84■■□□□ 1.09
LRRC41-208ENST00000617760 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
LRRC41-208ENST00000617760 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.07
LRRC41-208ENST00000617760 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
LRRC41-208ENST00000617760 CUX1P39880 1505 aa21.74■■□□□ 1.07
LRRC41-208ENST00000617760 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
LRRC41-208ENST00000617760 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
LRRC41-208ENST00000617760 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
LRRC41-208ENST00000617760 RAPGEF2Q9Y4G8 1499 aa21.65■■□□□ 1.06
LRRC41-208ENST00000617760 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
LRRC41-208ENST00000617760 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
LRRC41-208ENST00000617760 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
LRRC41-208ENST00000617760 ZEB1P37275 1124 aaPredicted RBP21.58■■□□□ 1.05
LRRC41-208ENST00000617760 CLIP1P30622 1438 aa21.57■■□□□ 1.04
LRRC41-208ENST00000617760 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
LRRC41-208ENST00000617760 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
LRRC41-208ENST00000617760 APLP2Q06481 763 aa21.48■■□□□ 1.03
LRRC41-208ENST00000617760 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
LRRC41-208ENST00000617760 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
LRRC41-208ENST00000617760 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
LRRC41-208ENST00000617760 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
LRRC41-208ENST00000617760 CUX2O14529 1486 aa21.35■■□□□ 1.01
LRRC41-208ENST00000617760 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
LRRC41-208ENST00000617760 IGF1RP08069 1367 aa21.32■■□□□ 1
LRRC41-208ENST00000617760 ARAP1Q96P48 1450 aa21.32■■□□□ 1
LRRC41-208ENST00000617760 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
LRRC41-208ENST00000617760 NESP48681 1621 aa21.29■■□□□ 1
LRRC41-208ENST00000617760 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
LRRC41-208ENST00000617760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
LRRC41-208ENST00000617760 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
LRRC41-208ENST00000617760 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
LRRC41-208ENST00000617760 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
LRRC41-208ENST00000617760 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
LRRC41-208ENST00000617760 ARHGAP35Q9NRY4 1499 aa21.2■□□□□ 0.98
LRRC41-208ENST00000617760 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
LRRC41-208ENST00000617760 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
LRRC41-208ENST00000617760 NEUROD1Q13562 356 aa21.17■□□□□ 0.98
LRRC41-208ENST00000617760 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
LRRC41-208ENST00000617760 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
LRRC41-208ENST00000617760 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
LRRC41-208ENST00000617760 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
LRRC41-208ENST00000617760 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
LRRC41-208ENST00000617760 CUL7Q14999 1698 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms