RNA–Protein interactions for RNA: ENST00000617164.4

BARD1-212, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-212ENST00000617164 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
BARD1-212ENST00000617164 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
BARD1-212ENST00000617164 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
BARD1-212ENST00000617164 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
BARD1-212ENST00000617164 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
BARD1-212ENST00000617164 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
BARD1-212ENST00000617164 APLP2Q06481 763 aa19.43■□□□□ 0.7
BARD1-212ENST00000617164 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
BARD1-212ENST00000617164 ABCC9O60706 1549 aa19.14■□□□□ 0.65
BARD1-212ENST00000617164 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
BARD1-212ENST00000617164 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
BARD1-212ENST00000617164 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
BARD1-212ENST00000617164 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
BARD1-212ENST00000617164 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
BARD1-212ENST00000617164 PCGF6Q9BYE7 350 aa18.61■□□□□ 0.57
BARD1-212ENST00000617164 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
BARD1-212ENST00000617164 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
BARD1-212ENST00000617164 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
BARD1-212ENST00000617164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
BARD1-212ENST00000617164 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
BARD1-212ENST00000617164 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.53
BARD1-212ENST00000617164 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
BARD1-212ENST00000617164 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
BARD1-212ENST00000617164 MYT1LQ9UL68 1186 aa18.26■□□□□ 0.51
BARD1-212ENST00000617164 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
BARD1-212ENST00000617164 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
BARD1-212ENST00000617164 LOC105371045A0A1W2PR82 267 aa18.17■□□□□ 0.5
BARD1-212ENST00000617164 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
BARD1-212ENST00000617164 ITGAEP38570 1179 aa18.1■□□□□ 0.49
BARD1-212ENST00000617164 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
BARD1-212ENST00000617164 FBLN2P98095 1184 aa18.01■□□□□ 0.47
BARD1-212ENST00000617164 NACADO15069 1562 aa17.93■□□□□ 0.46
BARD1-212ENST00000617164 CENPBP07199 599 aaPredicted RBP17.91■□□□□ 0.46
BARD1-212ENST00000617164 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
BARD1-212ENST00000617164 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
BARD1-212ENST00000617164 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
BARD1-212ENST00000617164 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
BARD1-212ENST00000617164 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
BARD1-212ENST00000617164 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
BARD1-212ENST00000617164 NEFLP07196 543 aa17.65■□□□□ 0.42
BARD1-212ENST00000617164 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
BARD1-212ENST00000617164 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
BARD1-212ENST00000617164 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
BARD1-212ENST00000617164 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
BARD1-212ENST00000617164 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
BARD1-212ENST00000617164 HRCP23327 699 aa17.53■□□□□ 0.4
BARD1-212ENST00000617164 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
BARD1-212ENST00000617164 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
BARD1-212ENST00000617164 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
BARD1-212ENST00000617164 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
BARD1-212ENST00000617164 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
BARD1-212ENST00000617164 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
BARD1-212ENST00000617164 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
BARD1-212ENST00000617164 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
BARD1-212ENST00000617164 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
BARD1-212ENST00000617164 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
BARD1-212ENST00000617164 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
BARD1-212ENST00000617164 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
BARD1-212ENST00000617164 EEA1Q15075 1411 aa17.27■□□□□ 0.36
BARD1-212ENST00000617164 BCANQ96GW7 911 aa17.26■□□□□ 0.35
BARD1-212ENST00000617164 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
BARD1-212ENST00000617164 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
BARD1-212ENST00000617164 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
BARD1-212ENST00000617164 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
BARD1-212ENST00000617164 MTUS2Q5JR59 1369 aa17.17■□□□□ 0.34
BARD1-212ENST00000617164 CLIP1P30622 1438 aa17.17■□□□□ 0.34
BARD1-212ENST00000617164 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
BARD1-212ENST00000617164 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
BARD1-212ENST00000617164 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
BARD1-212ENST00000617164 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
BARD1-212ENST00000617164 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
BARD1-212ENST00000617164 ANP32CO43423 234 aa17.09■□□□□ 0.33
BARD1-212ENST00000617164 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
BARD1-212ENST00000617164 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
BARD1-212ENST00000617164 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
BARD1-212ENST00000617164 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
BARD1-212ENST00000617164 CHIC2Q9UKJ5 165 aa17.06■□□□□ 0.32
BARD1-212ENST00000617164 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
BARD1-212ENST00000617164 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
BARD1-212ENST00000617164 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
BARD1-212ENST00000617164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■■■■□ 19.8
BARD1-212ENST00000617164 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
BARD1-212ENST00000617164 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
BARD1-212ENST00000617164 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
BARD1-212ENST00000617164 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
BARD1-212ENST00000617164 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
BARD1-212ENST00000617164 NEFMP07197 916 aa16.97■□□□□ 0.31
BARD1-212ENST00000617164 CUX2O14529 1486 aa16.95■□□□□ 0.3
BARD1-212ENST00000617164 TNIKQ9UKE5 1360 aa16.95■□□□□ 0.3
BARD1-212ENST00000617164 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
BARD1-212ENST00000617164 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
BARD1-212ENST00000617164 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
BARD1-212ENST00000617164 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
BARD1-212ENST00000617164 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
BARD1-212ENST00000617164 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
BARD1-212ENST00000617164 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
BARD1-212ENST00000617164 SOGA1O94964 1423 aa16.84■□□□□ 0.29
BARD1-212ENST00000617164 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.29
BARD1-212ENST00000617164 SLC24A1O60721 1099 aa16.83■□□□□ 0.28
BARD1-212ENST00000617164 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms