RNA–Protein interactions for RNA: ENST00000616659.1

C3orf49-203, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C3orf49, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-203ENST00000616659 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
C3orf49-203ENST00000616659 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
C3orf49-203ENST00000616659 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
C3orf49-203ENST00000616659 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
C3orf49-203ENST00000616659 FOXD1Q16676 465 aa21.61■■□□□ 1.05
C3orf49-203ENST00000616659 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
C3orf49-203ENST00000616659 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
C3orf49-203ENST00000616659 ADRA2BP18089 450 aa20.44■□□□□ 0.86
C3orf49-203ENST00000616659 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
C3orf49-203ENST00000616659 MSH5O43196 834 aa20.06■□□□□ 0.8
C3orf49-203ENST00000616659 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
C3orf49-203ENST00000616659 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
C3orf49-203ENST00000616659 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
C3orf49-203ENST00000616659 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
C3orf49-203ENST00000616659 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
C3orf49-203ENST00000616659 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
C3orf49-203ENST00000616659 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
C3orf49-203ENST00000616659 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
C3orf49-203ENST00000616659 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
C3orf49-203ENST00000616659 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
C3orf49-203ENST00000616659 KCNA4P22459 653 aa17.76■□□□□ 0.43
C3orf49-203ENST00000616659 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
C3orf49-203ENST00000616659 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
C3orf49-203ENST00000616659 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
C3orf49-203ENST00000616659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
C3orf49-203ENST00000616659 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
C3orf49-203ENST00000616659 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
C3orf49-203ENST00000616659 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
C3orf49-203ENST00000616659 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
C3orf49-203ENST00000616659 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
C3orf49-203ENST00000616659 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
C3orf49-203ENST00000616659 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
C3orf49-203ENST00000616659 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
C3orf49-203ENST00000616659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
C3orf49-203ENST00000616659 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
C3orf49-203ENST00000616659 ZBTB22O15209 634 aa16.39■□□□□ 0.21
C3orf49-203ENST00000616659 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
C3orf49-203ENST00000616659 CAPN15O75808 1086 aa16.33■□□□□ 0.2
C3orf49-203ENST00000616659 APLP2Q06481 763 aa16.3■□□□□ 0.2
C3orf49-203ENST00000616659 DSG3P32926 999 aa16.21■□□□□ 0.19
C3orf49-203ENST00000616659 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
C3orf49-203ENST00000616659 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
C3orf49-203ENST00000616659 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
C3orf49-203ENST00000616659 ABCB7O75027 752 aa16■□□□□ 0.15
C3orf49-203ENST00000616659 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
C3orf49-203ENST00000616659 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
C3orf49-203ENST00000616659 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
C3orf49-203ENST00000616659 POLA2Q14181 598 aa15.83■□□□□ 0.12
C3orf49-203ENST00000616659 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
C3orf49-203ENST00000616659 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
C3orf49-203ENST00000616659 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
C3orf49-203ENST00000616659 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
C3orf49-203ENST00000616659 FBLN2P98095 1184 aa15.3■□□□□ 0.04
C3orf49-203ENST00000616659 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
C3orf49-203ENST00000616659 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
C3orf49-203ENST00000616659 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
C3orf49-203ENST00000616659 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
C3orf49-203ENST00000616659 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
C3orf49-203ENST00000616659 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
C3orf49-203ENST00000616659 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
C3orf49-203ENST00000616659 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
C3orf49-203ENST00000616659 POTEHQ6S545 545 aa14.91□□□□□ -0.02
C3orf49-203ENST00000616659 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
C3orf49-203ENST00000616659 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
C3orf49-203ENST00000616659 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
C3orf49-203ENST00000616659 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
C3orf49-203ENST00000616659 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
C3orf49-203ENST00000616659 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
C3orf49-203ENST00000616659 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
C3orf49-203ENST00000616659 PROM2Q8N271 834 aa14.54□□□□□ -0.08
C3orf49-203ENST00000616659 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
C3orf49-203ENST00000616659 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
C3orf49-203ENST00000616659 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
C3orf49-203ENST00000616659 FKBP8Q14318 412 aa14.39□□□□□ -0.11
C3orf49-203ENST00000616659 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
C3orf49-203ENST00000616659 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
C3orf49-203ENST00000616659 HAX1O00165 279 aa14.24□□□□□ -0.13
C3orf49-203ENST00000616659 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
C3orf49-203ENST00000616659 C19orf67A6NJJ6 358 aa14.19□□□□□ -0.14
C3orf49-203ENST00000616659 EVX2Q03828 476 aa14.18□□□□□ -0.14
C3orf49-203ENST00000616659 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
C3orf49-203ENST00000616659 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
C3orf49-203ENST00000616659 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
C3orf49-203ENST00000616659 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
C3orf49-203ENST00000616659 MIER1Q8N108 512 aa13.96□□□□□ -0.17
C3orf49-203ENST00000616659 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
C3orf49-203ENST00000616659 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
C3orf49-203ENST00000616659 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
C3orf49-203ENST00000616659 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
C3orf49-203ENST00000616659 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
C3orf49-203ENST00000616659 GABBR2O75899 941 aa13.86□□□□□ -0.19
C3orf49-203ENST00000616659 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
C3orf49-203ENST00000616659 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
C3orf49-203ENST00000616659 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
C3orf49-203ENST00000616659 CLCN6P51797 869 aa13.76□□□□□ -0.21
C3orf49-203ENST00000616659 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
C3orf49-203ENST00000616659 NUBP1P53384 320 aa13.74□□□□□ -0.21
C3orf49-203ENST00000616659 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
C3orf49-203ENST00000616659 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
C3orf49-203ENST00000616659 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms