RNA–Protein interactions for RNA: ENST00000616146.4

GMFB-209, Transcript of glia maturation factor beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GMFB, Length 4,125 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMFB-209ENST00000616146 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
GMFB-209ENST00000616146 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
GMFB-209ENST00000616146 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
GMFB-209ENST00000616146 SHROOM4Q9ULL8 1493 aa15.32■□□□□ 0.04
GMFB-209ENST00000616146 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0.01
GMFB-209ENST00000616146 ABCC9O60706 1549 aa14.89□□□□□ -0.03
GMFB-209ENST00000616146 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
GMFB-209ENST00000616146 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
GMFB-209ENST00000616146 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
GMFB-209ENST00000616146 MYO15BQ96JP2 1530 aa14.55□□□□□ -0.08
GMFB-209ENST00000616146 NACADO15069 1562 aa14.5□□□□□ -0.09
GMFB-209ENST00000616146 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
GMFB-209ENST00000616146 CECR2Q9BXF3 1484 aa14.37□□□□□ -0.11
GMFB-209ENST00000616146 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
GMFB-209ENST00000616146 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
GMFB-209ENST00000616146 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
GMFB-209ENST00000616146 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
GMFB-209ENST00000616146 WIZO95785 1651 aa14.21□□□□□ -0.13
GMFB-209ENST00000616146 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
GMFB-209ENST00000616146 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
GMFB-209ENST00000616146 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
GMFB-209ENST00000616146 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.17
GMFB-209ENST00000616146 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
GMFB-209ENST00000616146 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
GMFB-209ENST00000616146 SMARCA2P51531 1590 aa13.82□□□□□ -0.2
GMFB-209ENST00000616146 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
GMFB-209ENST00000616146 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
GMFB-209ENST00000616146 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
GMFB-209ENST00000616146 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
GMFB-209ENST00000616146 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
GMFB-209ENST00000616146 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
GMFB-209ENST00000616146 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
GMFB-209ENST00000616146 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
GMFB-209ENST00000616146 BAZ1BQ9UIG0 1483 aaKnown RBP13.57□□□□□ -0.24
GMFB-209ENST00000616146 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
GMFB-209ENST00000616146 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
GMFB-209ENST00000616146 SOGA1O94964 1423 aa13.47□□□□□ -0.25
GMFB-209ENST00000616146 CC2D2AQ9P2K1 1620 aa13.45□□□□□ -0.26
GMFB-209ENST00000616146 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
GMFB-209ENST00000616146 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
GMFB-209ENST00000616146 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
GMFB-209ENST00000616146 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
GMFB-209ENST00000616146 CUX1P39880 1505 aa13.28□□□□□ -0.28
GMFB-209ENST00000616146 CFTRP13569 1480 aa13.26□□□□□ -0.29
GMFB-209ENST00000616146 PCGF6Q9BYE7 350 aa13.26□□□□□ -0.29
GMFB-209ENST00000616146 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
GMFB-209ENST00000616146 NESP48681 1621 aa13.25□□□□□ -0.29
GMFB-209ENST00000616146 BIVM-ERCC5R4GMW8 1640 aa13.25□□□□□ -0.29
GMFB-209ENST00000616146 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
GMFB-209ENST00000616146 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
GMFB-209ENST00000616146 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
GMFB-209ENST00000616146 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
GMFB-209ENST00000616146 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
GMFB-209ENST00000616146 CEP162Q5TB80 1403 aa13.1□□□□□ -0.31
GMFB-209ENST00000616146 KIF21BO75037 1637 aa13.07□□□□□ -0.32
GMFB-209ENST00000616146 KIF21AQ7Z4S6 1674 aa13.06□□□□□ -0.32
GMFB-209ENST00000616146 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
GMFB-209ENST00000616146 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
GMFB-209ENST00000616146 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
GMFB-209ENST00000616146 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
GMFB-209ENST00000616146 TNIKQ9UKE5 1360 aa13.03□□□□□ -0.32
GMFB-209ENST00000616146 EEA1Q15075 1411 aa13.01□□□□□ -0.33
GMFB-209ENST00000616146 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
GMFB-209ENST00000616146 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
GMFB-209ENST00000616146 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
GMFB-209ENST00000616146 URB2Q14146 1524 aaKnown RBP13□□□□□ -0.33
GMFB-209ENST00000616146 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
GMFB-209ENST00000616146 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
GMFB-209ENST00000616146 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
GMFB-209ENST00000616146 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
GMFB-209ENST00000616146 CUX2O14529 1486 aa12.94□□□□□ -0.34
GMFB-209ENST00000616146 POLA1P09884 1462 aaPredicted RBP12.94□□□□□ -0.34
GMFB-209ENST00000616146 HRCP23327 699 aa12.94□□□□□ -0.34
GMFB-209ENST00000616146 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
GMFB-209ENST00000616146 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
GMFB-209ENST00000616146 LAMC3Q9Y6N6 1575 aa12.93□□□□□ -0.34
GMFB-209ENST00000616146 IGF1RP08069 1367 aa12.91□□□□□ -0.34
GMFB-209ENST00000616146 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
GMFB-209ENST00000616146 CLIP1P30622 1438 aa12.88□□□□□ -0.35
GMFB-209ENST00000616146 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
GMFB-209ENST00000616146 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
GMFB-209ENST00000616146 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
GMFB-209ENST00000616146 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
GMFB-209ENST00000616146 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
GMFB-209ENST00000616146 ABCA5Q8WWZ7 1642 aa12.81□□□□□ -0.36
GMFB-209ENST00000616146 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
GMFB-209ENST00000616146 VPS8Q8N3P4 1428 aa12.78□□□□□ -0.36
GMFB-209ENST00000616146 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
GMFB-209ENST00000616146 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
GMFB-209ENST00000616146 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
GMFB-209ENST00000616146 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
GMFB-209ENST00000616146 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
GMFB-209ENST00000616146 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.372e-10■■■■□ 22.5
GMFB-209ENST00000616146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.37
GMFB-209ENST00000616146 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
GMFB-209ENST00000616146 CTTNBP2Q8WZ74 1663 aa12.7□□□□□ -0.38
GMFB-209ENST00000616146 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
GMFB-209ENST00000616146 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
GMFB-209ENST00000616146 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
GMFB-209ENST00000616146 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms