RNA–Protein interactions for RNA: ENST00000615791.1

ZC3H8-208, Transcript of zinc finger CCCH-type containing 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZC3H8, Length 1,527 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-208ENST00000615791 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
ZC3H8-208ENST00000615791 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
ZC3H8-208ENST00000615791 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
ZC3H8-208ENST00000615791 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
ZC3H8-208ENST00000615791 FOXD1Q16676 465 aa19.64■□□□□ 0.73
ZC3H8-208ENST00000615791 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
ZC3H8-208ENST00000615791 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
ZC3H8-208ENST00000615791 ADRA2BP18089 450 aa18.55■□□□□ 0.56
ZC3H8-208ENST00000615791 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
ZC3H8-208ENST00000615791 MSH5O43196 834 aa18.36■□□□□ 0.53
ZC3H8-208ENST00000615791 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
ZC3H8-208ENST00000615791 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
ZC3H8-208ENST00000615791 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
ZC3H8-208ENST00000615791 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
ZC3H8-208ENST00000615791 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
ZC3H8-208ENST00000615791 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
ZC3H8-208ENST00000615791 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
ZC3H8-208ENST00000615791 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
ZC3H8-208ENST00000615791 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
ZC3H8-208ENST00000615791 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
ZC3H8-208ENST00000615791 KCNA4P22459 653 aa16.19■□□□□ 0.18
ZC3H8-208ENST00000615791 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.15
ZC3H8-208ENST00000615791 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.15
ZC3H8-208ENST00000615791 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
ZC3H8-208ENST00000615791 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
ZC3H8-208ENST00000615791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.085e-7■□□□□ 9.5
ZC3H8-208ENST00000615791 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
ZC3H8-208ENST00000615791 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
ZC3H8-208ENST00000615791 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
ZC3H8-208ENST00000615791 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
ZC3H8-208ENST00000615791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
ZC3H8-208ENST00000615791 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
ZC3H8-208ENST00000615791 APLP2Q06481 763 aa15.08■□□□□ 0.01
ZC3H8-208ENST00000615791 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0.01
ZC3H8-208ENST00000615791 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
ZC3H8-208ENST00000615791 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
ZC3H8-208ENST00000615791 SPINK5Q9NQ38 1064 aaPredicted RBP14.89□□□□□ -0.03
ZC3H8-208ENST00000615791 ZBTB22O15209 634 aa14.88□□□□□ -0.03
ZC3H8-208ENST00000615791 CAPN15O75808 1086 aa14.87□□□□□ -0.03
ZC3H8-208ENST00000615791 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
ZC3H8-208ENST00000615791 DSG3P32926 999 aa14.75□□□□□ -0.05
ZC3H8-208ENST00000615791 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.06
ZC3H8-208ENST00000615791 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
ZC3H8-208ENST00000615791 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
ZC3H8-208ENST00000615791 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
ZC3H8-208ENST00000615791 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
ZC3H8-208ENST00000615791 ABCB7O75027 752 aa14.51□□□□□ -0.09
ZC3H8-208ENST00000615791 EHMT2Q96KQ7 1210 aa14.5□□□□□ -0.09
ZC3H8-208ENST00000615791 POLA2Q14181 598 aa14.44□□□□□ -0.1
ZC3H8-208ENST00000615791 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
ZC3H8-208ENST00000615791 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
ZC3H8-208ENST00000615791 FBLN2P98095 1184 aa14.07□□□□□ -0.16
ZC3H8-208ENST00000615791 POTEHQ6S545 545 aa14.04□□□□□ -0.16
ZC3H8-208ENST00000615791 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
ZC3H8-208ENST00000615791 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
ZC3H8-208ENST00000615791 AKT1S1Q96B36 256 aa13.9□□□□□ -0.19
ZC3H8-208ENST00000615791 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
ZC3H8-208ENST00000615791 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
ZC3H8-208ENST00000615791 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
ZC3H8-208ENST00000615791 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
ZC3H8-208ENST00000615791 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
ZC3H8-208ENST00000615791 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
ZC3H8-208ENST00000615791 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
ZC3H8-208ENST00000615791 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
ZC3H8-208ENST00000615791 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
ZC3H8-208ENST00000615791 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
ZC3H8-208ENST00000615791 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
ZC3H8-208ENST00000615791 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
ZC3H8-208ENST00000615791 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
ZC3H8-208ENST00000615791 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
ZC3H8-208ENST00000615791 PROM2Q8N271 834 aa13.33□□□□□ -0.28
ZC3H8-208ENST00000615791 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
ZC3H8-208ENST00000615791 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
ZC3H8-208ENST00000615791 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
ZC3H8-208ENST00000615791 FKBP8Q14318 412 aa13.16□□□□□ -0.3
ZC3H8-208ENST00000615791 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
ZC3H8-208ENST00000615791 HAX1O00165 279 aa13.09□□□□□ -0.31
ZC3H8-208ENST00000615791 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
ZC3H8-208ENST00000615791 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
ZC3H8-208ENST00000615791 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
ZC3H8-208ENST00000615791 C19orf67A6NJJ6 358 aa12.94□□□□□ -0.34
ZC3H8-208ENST00000615791 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
ZC3H8-208ENST00000615791 EVX2Q03828 476 aa12.89□□□□□ -0.35
ZC3H8-208ENST00000615791 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
ZC3H8-208ENST00000615791 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZC3H8-208ENST00000615791 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
ZC3H8-208ENST00000615791 MIER1Q8N108 512 aa12.81□□□□□ -0.36
ZC3H8-208ENST00000615791 CD44P16070 742 aaKnown RBP12.79□□□□□ -0.36
ZC3H8-208ENST00000615791 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
ZC3H8-208ENST00000615791 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
ZC3H8-208ENST00000615791 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
ZC3H8-208ENST00000615791 ABCC9O60706 1549 aa12.76□□□□□ -0.37
ZC3H8-208ENST00000615791 CLCN6P51797 869 aa12.75□□□□□ -0.37
ZC3H8-208ENST00000615791 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
ZC3H8-208ENST00000615791 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
ZC3H8-208ENST00000615791 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
ZC3H8-208ENST00000615791 GABBR2O75899 941 aa12.65□□□□□ -0.38
ZC3H8-208ENST00000615791 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
ZC3H8-208ENST00000615791 NUBP1P53384 320 aa12.55□□□□□ -0.4
ZC3H8-208ENST00000615791 RASEFQ8IZ41 740 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms