RNA–Protein interactions for RNA: ENST00000615555.4

MMP13-203, Transcript of matrix metallopeptidase 13, humanhuman

TSL 1 (best) BASIC

Gene MMP13, Length 1,152 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-203ENST00000615555 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
MMP13-203ENST00000615555 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
MMP13-203ENST00000615555 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
MMP13-203ENST00000615555 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
MMP13-203ENST00000615555 FOXD1Q16676 465 aa18.12■□□□□ 0.49
MMP13-203ENST00000615555 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
MMP13-203ENST00000615555 MSH5O43196 834 aa17.06■□□□□ 0.32
MMP13-203ENST00000615555 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
MMP13-203ENST00000615555 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
MMP13-203ENST00000615555 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
MMP13-203ENST00000615555 ADRA2BP18089 450 aa16.55■□□□□ 0.24
MMP13-203ENST00000615555 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
MMP13-203ENST00000615555 DMRT2Q9Y5R5 561 aa15.27■□□□□ 0.04
MMP13-203ENST00000615555 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
MMP13-203ENST00000615555 CACNB1Q02641 598 aaPredicted RBP14.94□□□□□ -0.02
MMP13-203ENST00000615555 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
MMP13-203ENST00000615555 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
MMP13-203ENST00000615555 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
MMP13-203ENST00000615555 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
MMP13-203ENST00000615555 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
MMP13-203ENST00000615555 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
MMP13-203ENST00000615555 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
MMP13-203ENST00000615555 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
MMP13-203ENST00000615555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
MMP13-203ENST00000615555 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
MMP13-203ENST00000615555 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
MMP13-203ENST00000615555 POTEHQ6S545 545 aa13.59□□□□□ -0.23
MMP13-203ENST00000615555 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
MMP13-203ENST00000615555 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
MMP13-203ENST00000615555 DSG3P32926 999 aa13.49□□□□□ -0.25
MMP13-203ENST00000615555 CAPN15O75808 1086 aa13.47□□□□□ -0.25
MMP13-203ENST00000615555 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
MMP13-203ENST00000615555 ABCB7O75027 752 aa13.15□□□□□ -0.3
MMP13-203ENST00000615555 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
MMP13-203ENST00000615555 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
MMP13-203ENST00000615555 KCNA4P22459 653 aa13.01□□□□□ -0.33
MMP13-203ENST00000615555 APLP2Q06481 763 aa13□□□□□ -0.33
MMP13-203ENST00000615555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
MMP13-203ENST00000615555 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
MMP13-203ENST00000615555 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
MMP13-203ENST00000615555 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
MMP13-203ENST00000615555 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
MMP13-203ENST00000615555 POLA2Q14181 598 aa12.69□□□□□ -0.38
MMP13-203ENST00000615555 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
MMP13-203ENST00000615555 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
MMP13-203ENST00000615555 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
MMP13-203ENST00000615555 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
MMP13-203ENST00000615555 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
MMP13-203ENST00000615555 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
MMP13-203ENST00000615555 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
MMP13-203ENST00000615555 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
MMP13-203ENST00000615555 HAX1O00165 279 aa12.27□□□□□ -0.45
MMP13-203ENST00000615555 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
MMP13-203ENST00000615555 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
MMP13-203ENST00000615555 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
MMP13-203ENST00000615555 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
MMP13-203ENST00000615555 EVX2Q03828 476 aa12.14□□□□□ -0.47
MMP13-203ENST00000615555 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
MMP13-203ENST00000615555 ZBTB22O15209 634 aa11.97□□□□□ -0.49
MMP13-203ENST00000615555 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
MMP13-203ENST00000615555 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
MMP13-203ENST00000615555 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
MMP13-203ENST00000615555 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
MMP13-203ENST00000615555 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
MMP13-203ENST00000615555 FBLN2P98095 1184 aa11.87□□□□□ -0.51
MMP13-203ENST00000615555 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
MMP13-203ENST00000615555 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
MMP13-203ENST00000615555 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
MMP13-203ENST00000615555 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
MMP13-203ENST00000615555 GABBR2O75899 941 aa11.79□□□□□ -0.52
MMP13-203ENST00000615555 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
MMP13-203ENST00000615555 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
MMP13-203ENST00000615555 LHX8Q68G74 356 aa11.74□□□□□ -0.53
MMP13-203ENST00000615555 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
MMP13-203ENST00000615555 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
MMP13-203ENST00000615555 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
MMP13-203ENST00000615555 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
MMP13-203ENST00000615555 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
MMP13-203ENST00000615555 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
MMP13-203ENST00000615555 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
MMP13-203ENST00000615555 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
MMP13-203ENST00000615555 DCBLD2Q96PD2 775 aa11.36□□□□□ -0.59
MMP13-203ENST00000615555 CLCN6P51797 869 aa11.35□□□□□ -0.59
MMP13-203ENST00000615555 ZNF579Q8NAF0 562 aaKnown RBP11.3□□□□□ -0.6
MMP13-203ENST00000615555 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
MMP13-203ENST00000615555 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
MMP13-203ENST00000615555 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
MMP13-203ENST00000615555 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
MMP13-203ENST00000615555 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
MMP13-203ENST00000615555 PHF12Q96QT6 1004 aa11.13□□□□□ -0.63
MMP13-203ENST00000615555 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
MMP13-203ENST00000615555 POTEMA6NI47 508 aa11.09□□□□□ -0.63
MMP13-203ENST00000615555 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
MMP13-203ENST00000615555 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
MMP13-203ENST00000615555 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
MMP13-203ENST00000615555 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
MMP13-203ENST00000615555 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
MMP13-203ENST00000615555 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
MMP13-203ENST00000615555 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
MMP13-203ENST00000615555 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms