RNA–Protein interactions for RNA: ENST00000613936.4

AC004852.2-202, humanhuman

TSL 1 (best)

Gene AC004852.2, Length 875 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004852.2-202ENST00000613936 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
AC004852.2-202ENST00000613936 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
AC004852.2-202ENST00000613936 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
AC004852.2-202ENST00000613936 PHF23Q9BUL5 403 aaPredicted RBP21.81■■□□□ 1.08
AC004852.2-202ENST00000613936 FOXD1Q16676 465 aa20.64■□□□□ 0.89
AC004852.2-202ENST00000613936 POTEDQ86YR6 584 aa19.66■□□□□ 0.74
AC004852.2-202ENST00000613936 MSH5O43196 834 aa19.57■□□□□ 0.72
AC004852.2-202ENST00000613936 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
AC004852.2-202ENST00000613936 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
AC004852.2-202ENST00000613936 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
AC004852.2-202ENST00000613936 ADRA2BP18089 450 aa18.92■□□□□ 0.62
AC004852.2-202ENST00000613936 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
AC004852.2-202ENST00000613936 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
AC004852.2-202ENST00000613936 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
AC004852.2-202ENST00000613936 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
AC004852.2-202ENST00000613936 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
AC004852.2-202ENST00000613936 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
AC004852.2-202ENST00000613936 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
AC004852.2-202ENST00000613936 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
AC004852.2-202ENST00000613936 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
AC004852.2-202ENST00000613936 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
AC004852.2-202ENST00000613936 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
AC004852.2-202ENST00000613936 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
AC004852.2-202ENST00000613936 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
AC004852.2-202ENST00000613936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC004852.2-202ENST00000613936 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
AC004852.2-202ENST00000613936 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
AC004852.2-202ENST00000613936 CAPN15O75808 1086 aa15.46■□□□□ 0.07
AC004852.2-202ENST00000613936 DSG3P32926 999 aa15.41■□□□□ 0.06
AC004852.2-202ENST00000613936 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
AC004852.2-202ENST00000613936 POTEHQ6S545 545 aa15.36■□□□□ 0.05
AC004852.2-202ENST00000613936 APLP2Q06481 763 aa15.2■□□□□ 0.02
AC004852.2-202ENST00000613936 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
AC004852.2-202ENST00000613936 SLC4A2P04920 1241 aa15.1■□□□□ 0.01
AC004852.2-202ENST00000613936 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
AC004852.2-202ENST00000613936 KCNA4P22459 653 aa15.08■□□□□ 0
AC004852.2-202ENST00000613936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
AC004852.2-202ENST00000613936 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
AC004852.2-202ENST00000613936 ABCB7O75027 752 aa15.02■□□□□ -0
AC004852.2-202ENST00000613936 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
AC004852.2-202ENST00000613936 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
AC004852.2-202ENST00000613936 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
AC004852.2-202ENST00000613936 POLA2Q14181 598 aa14.61□□□□□ -0.07
AC004852.2-202ENST00000613936 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
AC004852.2-202ENST00000613936 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
AC004852.2-202ENST00000613936 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
AC004852.2-202ENST00000613936 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
AC004852.2-202ENST00000613936 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
AC004852.2-202ENST00000613936 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
AC004852.2-202ENST00000613936 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
AC004852.2-202ENST00000613936 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
AC004852.2-202ENST00000613936 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
AC004852.2-202ENST00000613936 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
AC004852.2-202ENST00000613936 HAX1O00165 279 aa14.02□□□□□ -0.17
AC004852.2-202ENST00000613936 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
AC004852.2-202ENST00000613936 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
AC004852.2-202ENST00000613936 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
AC004852.2-202ENST00000613936 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
AC004852.2-202ENST00000613936 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
AC004852.2-202ENST00000613936 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
AC004852.2-202ENST00000613936 FBLN2P98095 1184 aa13.83□□□□□ -0.2
AC004852.2-202ENST00000613936 ZBTB22O15209 634 aa13.8□□□□□ -0.2
AC004852.2-202ENST00000613936 EVX2Q03828 476 aa13.71□□□□□ -0.21
AC004852.2-202ENST00000613936 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
AC004852.2-202ENST00000613936 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
AC004852.2-202ENST00000613936 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
AC004852.2-202ENST00000613936 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
AC004852.2-202ENST00000613936 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
AC004852.2-202ENST00000613936 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
AC004852.2-202ENST00000613936 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
AC004852.2-202ENST00000613936 GABBR2O75899 941 aa13.45□□□□□ -0.26
AC004852.2-202ENST00000613936 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
AC004852.2-202ENST00000613936 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
AC004852.2-202ENST00000613936 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC004852.2-202ENST00000613936 LHX8Q68G74 356 aa13.36□□□□□ -0.27
AC004852.2-202ENST00000613936 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
AC004852.2-202ENST00000613936 CLCN6P51797 869 aa13.23□□□□□ -0.29
AC004852.2-202ENST00000613936 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
AC004852.2-202ENST00000613936 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
AC004852.2-202ENST00000613936 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
AC004852.2-202ENST00000613936 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
AC004852.2-202ENST00000613936 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
AC004852.2-202ENST00000613936 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
AC004852.2-202ENST00000613936 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
AC004852.2-202ENST00000613936 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
AC004852.2-202ENST00000613936 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
AC004852.2-202ENST00000613936 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
AC004852.2-202ENST00000613936 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
AC004852.2-202ENST00000613936 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
AC004852.2-202ENST00000613936 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
AC004852.2-202ENST00000613936 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
AC004852.2-202ENST00000613936 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
AC004852.2-202ENST00000613936 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
AC004852.2-202ENST00000613936 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
AC004852.2-202ENST00000613936 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
AC004852.2-202ENST00000613936 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
AC004852.2-202ENST00000613936 POTEMA6NI47 508 aa12.58□□□□□ -0.4
AC004852.2-202ENST00000613936 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
AC004852.2-202ENST00000613936 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
AC004852.2-202ENST00000613936 C7P10643 843 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms