RNA–Protein interactions for RNA: ENST00000613706.4

BARD1-211, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-211ENST00000613706 NISCHQ9Y2I1 1504 aa20.23■□□□□ 0.83
BARD1-211ENST00000613706 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
BARD1-211ENST00000613706 SUPT5HO00267 1087 aaKnown RBP18.67■□□□□ 0.58
BARD1-211ENST00000613706 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
BARD1-211ENST00000613706 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
BARD1-211ENST00000613706 HRCP23327 699 aa17.68■□□□□ 0.42
BARD1-211ENST00000613706 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
BARD1-211ENST00000613706 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
BARD1-211ENST00000613706 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
BARD1-211ENST00000613706 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
BARD1-211ENST00000613706 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
BARD1-211ENST00000613706 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
BARD1-211ENST00000613706 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
BARD1-211ENST00000613706 TRIM41Q8WV44 630 aa17.16■□□□□ 0.34
BARD1-211ENST00000613706 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
BARD1-211ENST00000613706 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
BARD1-211ENST00000613706 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
BARD1-211ENST00000613706 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
BARD1-211ENST00000613706 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.27
BARD1-211ENST00000613706 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
BARD1-211ENST00000613706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
BARD1-211ENST00000613706 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
BARD1-211ENST00000613706 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
BARD1-211ENST00000613706 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
BARD1-211ENST00000613706 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
BARD1-211ENST00000613706 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
BARD1-211ENST00000613706 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
BARD1-211ENST00000613706 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
BARD1-211ENST00000613706 APLP2Q06481 763 aa16.45■□□□□ 0.22
BARD1-211ENST00000613706 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
BARD1-211ENST00000613706 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
BARD1-211ENST00000613706 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
BARD1-211ENST00000613706 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
BARD1-211ENST00000613706 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
BARD1-211ENST00000613706 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
BARD1-211ENST00000613706 ABCC9O60706 1549 aa16.25■□□□□ 0.19
BARD1-211ENST00000613706 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
BARD1-211ENST00000613706 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
BARD1-211ENST00000613706 ITGAEP38570 1179 aa16.06■□□□□ 0.16
BARD1-211ENST00000613706 MYT1Q01538 1121 aa16.06■□□□□ 0.16
BARD1-211ENST00000613706 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
BARD1-211ENST00000613706 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
BARD1-211ENST00000613706 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
BARD1-211ENST00000613706 MIER1Q8N108 512 aa15.97■□□□□ 0.15
BARD1-211ENST00000613706 ATP1B4Q9UN42 357 aaPredicted RBP15.95■□□□□ 0.14
BARD1-211ENST00000613706 CEP162Q5TB80 1403 aa15.89■□□□□ 0.13
BARD1-211ENST00000613706 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
BARD1-211ENST00000613706 BCANQ96GW7 911 aa15.81■□□□□ 0.12
BARD1-211ENST00000613706 SOGA1O94964 1423 aa15.79■□□□□ 0.12
BARD1-211ENST00000613706 NEFLP07196 543 aa15.75■□□□□ 0.11
BARD1-211ENST00000613706 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
BARD1-211ENST00000613706 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
BARD1-211ENST00000613706 WIZO95785 1651 aa15.72■□□□□ 0.11
BARD1-211ENST00000613706 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
BARD1-211ENST00000613706 CLIP1P30622 1438 aa15.66■□□□□ 0.1
BARD1-211ENST00000613706 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
BARD1-211ENST00000613706 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
BARD1-211ENST00000613706 NACADO15069 1562 aa15.61■□□□□ 0.09
BARD1-211ENST00000613706 ERICH6Q7L0X2 663 aa15.6■□□□□ 0.09
BARD1-211ENST00000613706 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
BARD1-211ENST00000613706 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
BARD1-211ENST00000613706 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
BARD1-211ENST00000613706 EEA1Q15075 1411 aa15.56■□□□□ 0.08
BARD1-211ENST00000613706 DDX10Q13206 875 aaKnown RBP15.54■□□□□ 0.08
BARD1-211ENST00000613706 FKBP8Q14318 412 aa15.53■□□□□ 0.08
BARD1-211ENST00000613706 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
BARD1-211ENST00000613706 HIRIP3Q9BW71 556 aaPredicted RBP15.51■□□□□ 0.07
BARD1-211ENST00000613706 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
BARD1-211ENST00000613706 SUPT16HQ9Y5B9 1047 aaKnown RBP15.49■□□□□ 0.07
BARD1-211ENST00000613706 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
BARD1-211ENST00000613706 TRIM52Q96A61 297 aa15.45■□□□□ 0.06
BARD1-211ENST00000613706 ANP32CO43423 234 aa15.44■□□□□ 0.06
BARD1-211ENST00000613706 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
BARD1-211ENST00000613706 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
BARD1-211ENST00000613706 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
BARD1-211ENST00000613706 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
BARD1-211ENST00000613706 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
BARD1-211ENST00000613706 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
BARD1-211ENST00000613706 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
BARD1-211ENST00000613706 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
BARD1-211ENST00000613706 IRX6P78412 446 aaPredicted RBP15.3■□□□□ 0.04
BARD1-211ENST00000613706 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
BARD1-211ENST00000613706 TSHZ2Q9NRE2 1034 aa15.28■□□□□ 0.04
BARD1-211ENST00000613706 ANP32EQ9BTT0 268 aa15.27■□□□□ 0.03
BARD1-211ENST00000613706 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
BARD1-211ENST00000613706 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
BARD1-211ENST00000613706 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
BARD1-211ENST00000613706 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
BARD1-211ENST00000613706 CDK11AQ9UQ88 783 aaPredicted RBP15.24■□□□□ 0.03
BARD1-211ENST00000613706 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
BARD1-211ENST00000613706 TONSLQ96HA7 1378 aa15.21■□□□□ 0.03
BARD1-211ENST00000613706 ARID3CA6NKF2 412 aa15.2■□□□□ 0.02
BARD1-211ENST00000613706 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
BARD1-211ENST00000613706 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
BARD1-211ENST00000613706 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
BARD1-211ENST00000613706 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
BARD1-211ENST00000613706 ZNF326Q5BKZ1 582 aaKnown RBP15.11■□□□□ 0.01
BARD1-211ENST00000613706 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
BARD1-211ENST00000613706 KIF21BO75037 1637 aa15.08■□□□□ 0.01
BARD1-211ENST00000613706 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms