RNA–Protein interactions for RNA: ENST00000612514.4

TTF1-203, Transcript of transcription termination factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTF1, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTF1-203ENST00000612514 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
TTF1-203ENST00000612514 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
TTF1-203ENST00000612514 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
TTF1-203ENST00000612514 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
TTF1-203ENST00000612514 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
TTF1-203ENST00000612514 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
TTF1-203ENST00000612514 ABCC9O60706 1549 aa17.51■□□□□ 0.39
TTF1-203ENST00000612514 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
TTF1-203ENST00000612514 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
TTF1-203ENST00000612514 NACADO15069 1562 aa17.25■□□□□ 0.35
TTF1-203ENST00000612514 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
TTF1-203ENST00000612514 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
TTF1-203ENST00000612514 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
TTF1-203ENST00000612514 CECR2Q9BXF3 1484 aa16.76■□□□□ 0.27
TTF1-203ENST00000612514 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
TTF1-203ENST00000612514 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
TTF1-203ENST00000612514 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
TTF1-203ENST00000612514 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
TTF1-203ENST00000612514 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
TTF1-203ENST00000612514 WIZO95785 1651 aa16.55■□□□□ 0.24
TTF1-203ENST00000612514 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
TTF1-203ENST00000612514 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
TTF1-203ENST00000612514 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
TTF1-203ENST00000612514 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
TTF1-203ENST00000612514 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
TTF1-203ENST00000612514 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
TTF1-203ENST00000612514 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
TTF1-203ENST00000612514 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
TTF1-203ENST00000612514 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
TTF1-203ENST00000612514 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
TTF1-203ENST00000612514 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
TTF1-203ENST00000612514 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
TTF1-203ENST00000612514 ABCC8Q09428 1581 aa16■□□□□ 0.15
TTF1-203ENST00000612514 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
TTF1-203ENST00000612514 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
TTF1-203ENST00000612514 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
TTF1-203ENST00000612514 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
TTF1-203ENST00000612514 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
TTF1-203ENST00000612514 SOGA1O94964 1423 aa15.77■□□□□ 0.12
TTF1-203ENST00000612514 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
TTF1-203ENST00000612514 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
TTF1-203ENST00000612514 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
TTF1-203ENST00000612514 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
TTF1-203ENST00000612514 EEA1Q15075 1411 aa15.68■□□□□ 0.1
TTF1-203ENST00000612514 CFTRP13569 1480 aa15.68■□□□□ 0.1
TTF1-203ENST00000612514 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
TTF1-203ENST00000612514 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
TTF1-203ENST00000612514 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
TTF1-203ENST00000612514 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
TTF1-203ENST00000612514 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
TTF1-203ENST00000612514 CUX1P39880 1505 aa15.55■□□□□ 0.08
TTF1-203ENST00000612514 TNIKQ9UKE5 1360 aa15.53■□□□□ 0.08
TTF1-203ENST00000612514 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
TTF1-203ENST00000612514 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
TTF1-203ENST00000612514 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
TTF1-203ENST00000612514 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
TTF1-203ENST00000612514 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
TTF1-203ENST00000612514 KIF21BO75037 1637 aa15.45■□□□□ 0.06
TTF1-203ENST00000612514 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
TTF1-203ENST00000612514 NESP48681 1621 aa15.44■□□□□ 0.06
TTF1-203ENST00000612514 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
TTF1-203ENST00000612514 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
TTF1-203ENST00000612514 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
TTF1-203ENST00000612514 HRCP23327 699 aa15.38■□□□□ 0.05
TTF1-203ENST00000612514 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
TTF1-203ENST00000612514 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
TTF1-203ENST00000612514 LAMC3Q9Y6N6 1575 aa15.35■□□□□ 0.05
TTF1-203ENST00000612514 CUX2O14529 1486 aa15.34■□□□□ 0.05
TTF1-203ENST00000612514 PRXQ9BXM0 1461 aa15.33■□□□□ 0.04
TTF1-203ENST00000612514 CLIP1P30622 1438 aa15.33■□□□□ 0.04
TTF1-203ENST00000612514 TTBK1Q5TCY1 1321 aaPredicted RBP15.31■□□□□ 0.04
TTF1-203ENST00000612514 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
TTF1-203ENST00000612514 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
TTF1-203ENST00000612514 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
TTF1-203ENST00000612514 TOPBP1Q92547 1522 aa15.28■□□□□ 0.04
TTF1-203ENST00000612514 IGF1RP08069 1367 aa15.27■□□□□ 0.04
TTF1-203ENST00000612514 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
TTF1-203ENST00000612514 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
TTF1-203ENST00000612514 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
TTF1-203ENST00000612514 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.02
TTF1-203ENST00000612514 APLP2Q06481 763 aa15.19■□□□□ 0.02
TTF1-203ENST00000612514 VPS8Q8N3P4 1428 aa15.19■□□□□ 0.02
TTF1-203ENST00000612514 KIF21AQ7Z4S6 1674 aa15.18■□□□□ 0.02
TTF1-203ENST00000612514 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
TTF1-203ENST00000612514 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
TTF1-203ENST00000612514 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
TTF1-203ENST00000612514 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
TTF1-203ENST00000612514 ARHGAP35Q9NRY4 1499 aa15.05■□□□□ -0
TTF1-203ENST00000612514 MRC2Q9UBG0 1479 aa15.05■□□□□ -0
TTF1-203ENST00000612514 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
TTF1-203ENST00000612514 WDR97A6NE52 1622 aa15.05■□□□□ -0
TTF1-203ENST00000612514 CUL7Q14999 1698 aa15.03■□□□□ -0
TTF1-203ENST00000612514 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
TTF1-203ENST00000612514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
TTF1-203ENST00000612514 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
TTF1-203ENST00000612514 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
TTF1-203ENST00000612514 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
TTF1-203ENST00000612514 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
TTF1-203ENST00000612514 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
TTF1-203ENST00000612514 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms