RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 AEBP2Q6ZN18 517 aaPredicted RBP33.1■■■□□ 2.89
FAM228B-205ENST00000611127 CHIC1Q5VXU3 224 aa31.98■■■□□ 2.71
FAM228B-205ENST00000611127 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
FAM228B-205ENST00000611127 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
FAM228B-205ENST00000611127 FOXD1Q16676 465 aa26.24■■□□□ 1.79
FAM228B-205ENST00000611127 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
FAM228B-205ENST00000611127 PPP6R1Q9UPN7 881 aa24.8■■□□□ 1.56
FAM228B-205ENST00000611127 ADRA2BP18089 450 aa24.76■■□□□ 1.55
FAM228B-205ENST00000611127 PIAS4Q8N2W9 510 aaPredicted RBP24.67■■□□□ 1.54
FAM228B-205ENST00000611127 MSH5O43196 834 aa24.57■■□□□ 1.52
FAM228B-205ENST00000611127 POTEDQ86YR6 584 aa23.08■■□□□ 1.29
FAM228B-205ENST00000611127 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
FAM228B-205ENST00000611127 PPP4R3CPQ6ZMV5 832 aa22.6■■□□□ 1.21
FAM228B-205ENST00000611127 MAPK8IP2Q13387 824 aaPredicted RBP22.57■■□□□ 1.2
FAM228B-205ENST00000611127 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
FAM228B-205ENST00000611127 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
FAM228B-205ENST00000611127 NCBP3Q53F19 620 aaKnown RBP22.01■■□□□ 1.11
FAM228B-205ENST00000611127 HOXD11P31277 338 aaPredicted RBP21.88■■□□□ 1.09
FAM228B-205ENST00000611127 RNF216Q9NWF9 866 aaPredicted RBP21.86■■□□□ 1.09
FAM228B-205ENST00000611127 NPM3O75607 178 aaKnown RBP21.52■■□□□ 1.04
FAM228B-205ENST00000611127 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
FAM228B-205ENST00000611127 KCNA4P22459 653 aa21.45■■□□□ 1.02
FAM228B-205ENST00000611127 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
FAM228B-205ENST00000611127 RNF39Q9H2S5 420 aa20.93■□□□□ 0.94
FAM228B-205ENST00000611127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
FAM228B-205ENST00000611127 CACNB1Q02641 598 aaPredicted RBP20.72■□□□□ 0.91
FAM228B-205ENST00000611127 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
FAM228B-205ENST00000611127 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
FAM228B-205ENST00000611127 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
FAM228B-205ENST00000611127 U3KPZ7 1027 aaPredicted RBP20.38■□□□□ 0.85
FAM228B-205ENST00000611127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
FAM228B-205ENST00000611127 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
FAM228B-205ENST00000611127 APLP2Q06481 763 aa20.12■□□□□ 0.81
FAM228B-205ENST00000611127 SAMD1Q6SPF0 538 aaPredicted RBP20.02■□□□□ 0.8
FAM228B-205ENST00000611127 MYCNP04198 464 aaPredicted RBP20■□□□□ 0.79
FAM228B-205ENST00000611127 FOXD4L1Q9NU39 408 aa20■□□□□ 0.79
FAM228B-205ENST00000611127 CAPN15O75808 1086 aa19.92■□□□□ 0.78
FAM228B-205ENST00000611127 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
FAM228B-205ENST00000611127 ZNF219Q9P2Y4 722 aaPredicted RBP19.82■□□□□ 0.76
FAM228B-205ENST00000611127 DSG3P32926 999 aa19.7■□□□□ 0.74
FAM228B-205ENST00000611127 ZBTB22O15209 634 aa19.68■□□□□ 0.74
FAM228B-205ENST00000611127 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
FAM228B-205ENST00000611127 ATXN8OSP0DMR3 200 aa19.45■□□□□ 0.7
FAM228B-205ENST00000611127 ABCB7O75027 752 aa19.41■□□□□ 0.7
FAM228B-205ENST00000611127 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
FAM228B-205ENST00000611127 POLA2Q14181 598 aa19.27■□□□□ 0.68
FAM228B-205ENST00000611127 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
FAM228B-205ENST00000611127 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
FAM228B-205ENST00000611127 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
FAM228B-205ENST00000611127 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
FAM228B-205ENST00000611127 FBLN2P98095 1184 aa18.75■□□□□ 0.59
FAM228B-205ENST00000611127 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
FAM228B-205ENST00000611127 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
FAM228B-205ENST00000611127 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
FAM228B-205ENST00000611127 MKRN4PQ13434 485 aaPredicted RBP18.49■□□□□ 0.55
FAM228B-205ENST00000611127 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
FAM228B-205ENST00000611127 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
FAM228B-205ENST00000611127 SPDYE2Q495Y8 402 aa18.48■□□□□ 0.55
FAM228B-205ENST00000611127 REM2Q8IYK8 340 aaPredicted RBP18.29■□□□□ 0.52
FAM228B-205ENST00000611127 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
FAM228B-205ENST00000611127 CHRDL2Q6WN34 429 aa18.24■□□□□ 0.51
FAM228B-205ENST00000611127 SSUH2Q9Y2M2 353 aa18.23■□□□□ 0.51
FAM228B-205ENST00000611127 POTEHQ6S545 545 aa18.21■□□□□ 0.51
FAM228B-205ENST00000611127 PITPNM1O00562 1244 aa18.06■□□□□ 0.48
FAM228B-205ENST00000611127 SPDYE1Q8NFV5 336 aaPredicted RBP18.04■□□□□ 0.48
FAM228B-205ENST00000611127 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
FAM228B-205ENST00000611127 SPDYE4A6NLX3 237 aa17.92■□□□□ 0.46
FAM228B-205ENST00000611127 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
FAM228B-205ENST00000611127 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
FAM228B-205ENST00000611127 PIP4P2Q8N4L2 257 aa17.85■□□□□ 0.45
FAM228B-205ENST00000611127 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
FAM228B-205ENST00000611127 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
FAM228B-205ENST00000611127 PRKAR2AP13861 404 aaKnown RBP17.61■□□□□ 0.41
FAM228B-205ENST00000611127 PROM2Q8N271 834 aa17.6■□□□□ 0.41
FAM228B-205ENST00000611127 HAX1O00165 279 aa17.44■□□□□ 0.38
FAM228B-205ENST00000611127 FKBP8Q14318 412 aa17.42■□□□□ 0.38
FAM228B-205ENST00000611127 CHADLQ6NUI6 762 aa17.42■□□□□ 0.38
FAM228B-205ENST00000611127 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
FAM228B-205ENST00000611127 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
FAM228B-205ENST00000611127 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
FAM228B-205ENST00000611127 C19orf67A6NJJ6 358 aa17.28■□□□□ 0.36
FAM228B-205ENST00000611127 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
FAM228B-205ENST00000611127 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
FAM228B-205ENST00000611127 EVX2Q03828 476 aa17.11■□□□□ 0.33
FAM228B-205ENST00000611127 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
FAM228B-205ENST00000611127 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
FAM228B-205ENST00000611127 MNX1P50219 401 aaPredicted RBP17.07■□□□□ 0.32
FAM228B-205ENST00000611127 MIER1Q8N108 512 aa17.05■□□□□ 0.32
FAM228B-205ENST00000611127 CLCN6P51797 869 aa17.02■□□□□ 0.32
FAM228B-205ENST00000611127 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
FAM228B-205ENST00000611127 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
FAM228B-205ENST00000611127 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
FAM228B-205ENST00000611127 ZNF579Q8NAF0 562 aaKnown RBP16.91■□□□□ 0.3
FAM228B-205ENST00000611127 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
FAM228B-205ENST00000611127 GABBR2O75899 941 aa16.88■□□□□ 0.29
FAM228B-205ENST00000611127 VASPP50552 380 aaPredicted RBP16.77■□□□□ 0.28
FAM228B-205ENST00000611127 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
FAM228B-205ENST00000611127 RASEFQ8IZ41 740 aa16.66■□□□□ 0.26
FAM228B-205ENST00000611127 PHF12Q96QT6 1004 aa16.65■□□□□ 0.26
FAM228B-205ENST00000611127 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms