RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
TP53-218ENST00000610292 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
TP53-218ENST00000610292 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
TP53-218ENST00000610292 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
TP53-218ENST00000610292 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
TP53-218ENST00000610292 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
TP53-218ENST00000610292 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
TP53-218ENST00000610292 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
TP53-218ENST00000610292 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.8
TP53-218ENST00000610292 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
TP53-218ENST00000610292 HRCP23327 699 aa19.65■□□□□ 0.74
TP53-218ENST00000610292 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
TP53-218ENST00000610292 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
TP53-218ENST00000610292 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
TP53-218ENST00000610292 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
TP53-218ENST00000610292 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
TP53-218ENST00000610292 ABCC9O60706 1549 aa19.21■□□□□ 0.67
TP53-218ENST00000610292 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
TP53-218ENST00000610292 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
TP53-218ENST00000610292 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
TP53-218ENST00000610292 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
TP53-218ENST00000610292 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
TP53-218ENST00000610292 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
TP53-218ENST00000610292 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
TP53-218ENST00000610292 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
TP53-218ENST00000610292 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
TP53-218ENST00000610292 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
TP53-218ENST00000610292 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
TP53-218ENST00000610292 NACADO15069 1562 aa18.71■□□□□ 0.59
TP53-218ENST00000610292 WIZO95785 1651 aa18.62■□□□□ 0.57
TP53-218ENST00000610292 ADRA2BP18089 450 aa18.5■□□□□ 0.55
TP53-218ENST00000610292 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
TP53-218ENST00000610292 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
TP53-218ENST00000610292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
TP53-218ENST00000610292 KCNA4P22459 653 aa18.32■□□□□ 0.52
TP53-218ENST00000610292 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
TP53-218ENST00000610292 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
TP53-218ENST00000610292 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
TP53-218ENST00000610292 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
TP53-218ENST00000610292 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
TP53-218ENST00000610292 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
TP53-218ENST00000610292 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
TP53-218ENST00000610292 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
TP53-218ENST00000610292 SOGA1O94964 1423 aa18.21■□□□□ 0.51
TP53-218ENST00000610292 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
TP53-218ENST00000610292 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
TP53-218ENST00000610292 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
TP53-218ENST00000610292 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
TP53-218ENST00000610292 TNIKQ9UKE5 1360 aa18.12■□□□□ 0.49
TP53-218ENST00000610292 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
TP53-218ENST00000610292 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
TP53-218ENST00000610292 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.49
TP53-218ENST00000610292 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
TP53-218ENST00000610292 EEA1Q15075 1411 aa18.04■□□□□ 0.48
TP53-218ENST00000610292 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
TP53-218ENST00000610292 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
TP53-218ENST00000610292 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
TP53-218ENST00000610292 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
TP53-218ENST00000610292 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
TP53-218ENST00000610292 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
TP53-218ENST00000610292 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
TP53-218ENST00000610292 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
TP53-218ENST00000610292 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
TP53-218ENST00000610292 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
TP53-218ENST00000610292 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
TP53-218ENST00000610292 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
TP53-218ENST00000610292 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
TP53-218ENST00000610292 CLIP1P30622 1438 aa17.81■□□□□ 0.44
TP53-218ENST00000610292 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
TP53-218ENST00000610292 KIF21BO75037 1637 aa17.77■□□□□ 0.44
TP53-218ENST00000610292 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.43
TP53-218ENST00000610292 FOXD1Q16676 465 aa17.74■□□□□ 0.43
TP53-218ENST00000610292 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
TP53-218ENST00000610292 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
TP53-218ENST00000610292 VPS8Q8N3P4 1428 aa17.73■□□□□ 0.43
TP53-218ENST00000610292 APLP2Q06481 763 aa17.72■□□□□ 0.43
TP53-218ENST00000610292 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
TP53-218ENST00000610292 MIER1Q8N108 512 aa17.64■□□□□ 0.41
TP53-218ENST00000610292 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
TP53-218ENST00000610292 KANK4Q5T7N3 995 aaPredicted RBP17.5■□□□□ 0.39
TP53-218ENST00000610292 PRXQ9BXM0 1461 aa17.49■□□□□ 0.39
TP53-218ENST00000610292 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
TP53-218ENST00000610292 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
TP53-218ENST00000610292 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
TP53-218ENST00000610292 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
TP53-218ENST00000610292 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
TP53-218ENST00000610292 CUX1P39880 1505 aa17.41■□□□□ 0.38
TP53-218ENST00000610292 CLSPNQ9HAW4 1339 aa17.4■□□□□ 0.38
TP53-218ENST00000610292 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
TP53-218ENST00000610292 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
TP53-218ENST00000610292 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.37
TP53-218ENST00000610292 ITGAEP38570 1179 aa17.33■□□□□ 0.36
TP53-218ENST00000610292 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
TP53-218ENST00000610292 ARHGAP35Q9NRY4 1499 aa17.3■□□□□ 0.36
TP53-218ENST00000610292 CFTRP13569 1480 aa17.29■□□□□ 0.36
TP53-218ENST00000610292 CCNB3Q8WWL7 1395 aa17.29■□□□□ 0.36
TP53-218ENST00000610292 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
TP53-218ENST00000610292 CUX2O14529 1486 aa17.22■□□□□ 0.35
TP53-218ENST00000610292 IGF1RP08069 1367 aa17.21■□□□□ 0.35
TP53-218ENST00000610292 RAB3GAP2Q9H2M9 1393 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms