RNA–Protein interactions for RNA: ENST00000608781.1

CCDC138-207, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC138, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-207ENST00000608781 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
CCDC138-207ENST00000608781 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
CCDC138-207ENST00000608781 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
CCDC138-207ENST00000608781 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
CCDC138-207ENST00000608781 FOXD1Q16676 465 aa20.74■□□□□ 0.91
CCDC138-207ENST00000608781 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
CCDC138-207ENST00000608781 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
CCDC138-207ENST00000608781 ADRA2BP18089 450 aa19.59■□□□□ 0.73
CCDC138-207ENST00000608781 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
CCDC138-207ENST00000608781 MSH5O43196 834 aa19.24■□□□□ 0.67
CCDC138-207ENST00000608781 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
CCDC138-207ENST00000608781 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
CCDC138-207ENST00000608781 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CCDC138-207ENST00000608781 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
CCDC138-207ENST00000608781 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
CCDC138-207ENST00000608781 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
CCDC138-207ENST00000608781 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
CCDC138-207ENST00000608781 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CCDC138-207ENST00000608781 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
CCDC138-207ENST00000608781 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
CCDC138-207ENST00000608781 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
CCDC138-207ENST00000608781 KCNA4P22459 653 aa16.86■□□□□ 0.29
CCDC138-207ENST00000608781 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
CCDC138-207ENST00000608781 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
CCDC138-207ENST00000608781 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
CCDC138-207ENST00000608781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC138-207ENST00000608781 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
CCDC138-207ENST00000608781 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
CCDC138-207ENST00000608781 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
CCDC138-207ENST00000608781 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
CCDC138-207ENST00000608781 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
CCDC138-207ENST00000608781 CAPN15O75808 1086 aa15.7■□□□□ 0.1
CCDC138-207ENST00000608781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
CCDC138-207ENST00000608781 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
CCDC138-207ENST00000608781 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
CCDC138-207ENST00000608781 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
CCDC138-207ENST00000608781 SAMD1Q6SPF0 538 aaPredicted RBP15.58■□□□□ 0.08
CCDC138-207ENST00000608781 APLP2Q06481 763 aa15.55■□□□□ 0.08
CCDC138-207ENST00000608781 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
CCDC138-207ENST00000608781 DSG3P32926 999 aa15.53■□□□□ 0.08
CCDC138-207ENST00000608781 ZBTB22O15209 634 aa15.52■□□□□ 0.08
CCDC138-207ENST00000608781 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
CCDC138-207ENST00000608781 ABCB7O75027 752 aa15.38■□□□□ 0.05
CCDC138-207ENST00000608781 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
CCDC138-207ENST00000608781 POLA2Q14181 598 aa15.17■□□□□ 0.02
CCDC138-207ENST00000608781 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
CCDC138-207ENST00000608781 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
CCDC138-207ENST00000608781 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
CCDC138-207ENST00000608781 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
CCDC138-207ENST00000608781 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
CCDC138-207ENST00000608781 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
CCDC138-207ENST00000608781 FBLN2P98095 1184 aa14.6□□□□□ -0.07
CCDC138-207ENST00000608781 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
CCDC138-207ENST00000608781 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
CCDC138-207ENST00000608781 POTEHQ6S545 545 aa14.42□□□□□ -0.1
CCDC138-207ENST00000608781 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
CCDC138-207ENST00000608781 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
CCDC138-207ENST00000608781 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
CCDC138-207ENST00000608781 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
CCDC138-207ENST00000608781 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
CCDC138-207ENST00000608781 ZNF692Q9BU19 519 aaPredicted RBP14.31□□□□□ -0.12
CCDC138-207ENST00000608781 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
CCDC138-207ENST00000608781 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
CCDC138-207ENST00000608781 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCDC138-207ENST00000608781 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
CCDC138-207ENST00000608781 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
CCDC138-207ENST00000608781 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
CCDC138-207ENST00000608781 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC138-207ENST00000608781 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
CCDC138-207ENST00000608781 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
CCDC138-207ENST00000608781 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
CCDC138-207ENST00000608781 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
CCDC138-207ENST00000608781 HAX1O00165 279 aa13.78□□□□□ -0.2
CCDC138-207ENST00000608781 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
CCDC138-207ENST00000608781 PROM2Q8N271 834 aa13.71□□□□□ -0.21
CCDC138-207ENST00000608781 EVX2Q03828 476 aa13.66□□□□□ -0.22
CCDC138-207ENST00000608781 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
CCDC138-207ENST00000608781 FKBP8Q14318 412 aa13.63□□□□□ -0.23
CCDC138-207ENST00000608781 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
CCDC138-207ENST00000608781 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
CCDC138-207ENST00000608781 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
CCDC138-207ENST00000608781 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
CCDC138-207ENST00000608781 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
CCDC138-207ENST00000608781 MIER1Q8N108 512 aa13.35□□□□□ -0.27
CCDC138-207ENST00000608781 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC138-207ENST00000608781 GABBR2O75899 941 aa13.33□□□□□ -0.28
CCDC138-207ENST00000608781 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
CCDC138-207ENST00000608781 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
CCDC138-207ENST00000608781 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
CCDC138-207ENST00000608781 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
CCDC138-207ENST00000608781 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CCDC138-207ENST00000608781 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
CCDC138-207ENST00000608781 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
CCDC138-207ENST00000608781 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
CCDC138-207ENST00000608781 CLCN6P51797 869 aa13.14□□□□□ -0.31
CCDC138-207ENST00000608781 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
CCDC138-207ENST00000608781 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
CCDC138-207ENST00000608781 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
CCDC138-207ENST00000608781 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
CCDC138-207ENST00000608781 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms