RNA–Protein interactions for RNA: ENST00000608566.1

SUCO-205, Transcript of SUN domain containing ossification factor, humanhuman

TSL 2

Gene SUCO, Length 756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-205ENST00000608566 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
SUCO-205ENST00000608566 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
SUCO-205ENST00000608566 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
SUCO-205ENST00000608566 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
SUCO-205ENST00000608566 FOXD1Q16676 465 aa23.07■■□□□ 1.28
SUCO-205ENST00000608566 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
SUCO-205ENST00000608566 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
SUCO-205ENST00000608566 ADRA2BP18089 450 aa21.73■■□□□ 1.07
SUCO-205ENST00000608566 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
SUCO-205ENST00000608566 MSH5O43196 834 aa21.44■■□□□ 1.02
SUCO-205ENST00000608566 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
SUCO-205ENST00000608566 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
SUCO-205ENST00000608566 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
SUCO-205ENST00000608566 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
SUCO-205ENST00000608566 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
SUCO-205ENST00000608566 CNKSR2Q8WXI2 1034 aa19.19■□□□□ 0.66
SUCO-205ENST00000608566 HOXD11P31277 338 aaPredicted RBP19.04■□□□□ 0.64
SUCO-205ENST00000608566 RNF216Q9NWF9 866 aaPredicted RBP18.96■□□□□ 0.63
SUCO-205ENST00000608566 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
SUCO-205ENST00000608566 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
SUCO-205ENST00000608566 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
SUCO-205ENST00000608566 KCNA4P22459 653 aa18.57■□□□□ 0.56
SUCO-205ENST00000608566 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
SUCO-205ENST00000608566 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
SUCO-205ENST00000608566 CACNB1Q02641 598 aaPredicted RBP18.27■□□□□ 0.52
SUCO-205ENST00000608566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.14■□□□□ 0.496e-6■■■□□ 19.2
SUCO-205ENST00000608566 C1QBPQ07021 282 aaKnown RBP18.07■□□□□ 0.48
SUCO-205ENST00000608566 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
SUCO-205ENST00000608566 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
SUCO-205ENST00000608566 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
SUCO-205ENST00000608566 NISCHQ9Y2I1 1504 aa17.55■□□□□ 0.4
SUCO-205ENST00000608566 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
SUCO-205ENST00000608566 CAPN15O75808 1086 aa17.42■□□□□ 0.38
SUCO-205ENST00000608566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
SUCO-205ENST00000608566 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
SUCO-205ENST00000608566 DSG3P32926 999 aa17.28■□□□□ 0.36
SUCO-205ENST00000608566 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
SUCO-205ENST00000608566 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
SUCO-205ENST00000608566 APLP2Q06481 763 aa17.24■□□□□ 0.35
SUCO-205ENST00000608566 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
SUCO-205ENST00000608566 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
SUCO-205ENST00000608566 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
SUCO-205ENST00000608566 ZBTB22O15209 634 aa17.1■□□□□ 0.33
SUCO-205ENST00000608566 ABCB7O75027 752 aa17.06■□□□□ 0.32
SUCO-205ENST00000608566 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
SUCO-205ENST00000608566 POLA2Q14181 598 aa16.81■□□□□ 0.28
SUCO-205ENST00000608566 ATXN8OSP0DMR3 200 aa16.64■□□□□ 0.25
SUCO-205ENST00000608566 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
SUCO-205ENST00000608566 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
SUCO-205ENST00000608566 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
SUCO-205ENST00000608566 RBM42Q9BTD8 480 aaKnown RBP16.41■□□□□ 0.22
SUCO-205ENST00000608566 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
SUCO-205ENST00000608566 FBLN2P98095 1184 aa16.14■□□□□ 0.17
SUCO-205ENST00000608566 POTEHQ6S545 545 aa16.14■□□□□ 0.17
SUCO-205ENST00000608566 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
SUCO-205ENST00000608566 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
SUCO-205ENST00000608566 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
SUCO-205ENST00000608566 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
SUCO-205ENST00000608566 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
SUCO-205ENST00000608566 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
SUCO-205ENST00000608566 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
SUCO-205ENST00000608566 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
SUCO-205ENST00000608566 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
SUCO-205ENST00000608566 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
SUCO-205ENST00000608566 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
SUCO-205ENST00000608566 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
SUCO-205ENST00000608566 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
SUCO-205ENST00000608566 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
SUCO-205ENST00000608566 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
SUCO-205ENST00000608566 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
SUCO-205ENST00000608566 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
SUCO-205ENST00000608566 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
SUCO-205ENST00000608566 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
SUCO-205ENST00000608566 HAX1O00165 279 aa15.33■□□□□ 0.04
SUCO-205ENST00000608566 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
SUCO-205ENST00000608566 SP7Q8TDD2 431 aaPredicted RBP15.25■□□□□ 0.03
SUCO-205ENST00000608566 EVX2Q03828 476 aa15.22■□□□□ 0.03
SUCO-205ENST00000608566 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
SUCO-205ENST00000608566 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
SUCO-205ENST00000608566 PROM2Q8N271 834 aa15.12■□□□□ 0.01
SUCO-205ENST00000608566 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
SUCO-205ENST00000608566 FARP1Q9Y4F1 1045 aaPredicted RBP15.09■□□□□ 0.01
SUCO-205ENST00000608566 FKBP8Q14318 412 aa14.95□□□□□ -0.02
SUCO-205ENST00000608566 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
SUCO-205ENST00000608566 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
SUCO-205ENST00000608566 GABBR2O75899 941 aa14.85□□□□□ -0.03
SUCO-205ENST00000608566 NPM1P06748 294 aaKnown RBP eCLIP14.77□□□□□ -0.05
SUCO-205ENST00000608566 ZRANB1Q9UGI0 708 aa14.77□□□□□ -0.05
SUCO-205ENST00000608566 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
SUCO-205ENST00000608566 MIER1Q8N108 512 aa14.72□□□□□ -0.05
SUCO-205ENST00000608566 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
SUCO-205ENST00000608566 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
SUCO-205ENST00000608566 CLCN6P51797 869 aa14.63□□□□□ -0.07
SUCO-205ENST00000608566 ABCC9O60706 1549 aa14.62□□□□□ -0.07
SUCO-205ENST00000608566 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
SUCO-205ENST00000608566 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
SUCO-205ENST00000608566 PHF12Q96QT6 1004 aa14.6□□□□□ -0.07
SUCO-205ENST00000608566 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
SUCO-205ENST00000608566 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
SUCO-205ENST00000608566 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms