RNA–Protein interactions for RNA: ENST00000608525.5

SMIM8-207, Transcript of small integral membrane protein 8, humanhuman

TSL 5 BASIC

Gene SMIM8, Length 735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-207ENST00000608525 AEBP2Q6ZN18 517 aaPredicted RBP34.05■■■■□ 3.04
SMIM8-207ENST00000608525 CHIC1Q5VXU3 224 aa33.41■■■□□ 2.94
SMIM8-207ENST00000608525 PHF23Q9BUL5 403 aaPredicted RBP29.38■■■□□ 2.29
SMIM8-207ENST00000608525 SENP3Q9H4L4 574 aaPredicted RBP28.91■■■□□ 2.22
SMIM8-207ENST00000608525 PLPPR3Q6T4P5 718 aa27.18■■□□□ 1.94
SMIM8-207ENST00000608525 FOXD1Q16676 465 aa26.79■■□□□ 1.88
SMIM8-207ENST00000608525 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
SMIM8-207ENST00000608525 ADRA2BP18089 450 aa25.82■■□□□ 1.72
SMIM8-207ENST00000608525 PIAS4Q8N2W9 510 aaPredicted RBP25.25■■□□□ 1.63
SMIM8-207ENST00000608525 NISCHQ9Y2I1 1504 aa25.24■■□□□ 1.63
SMIM8-207ENST00000608525 MSH5O43196 834 aa24.69■■□□□ 1.54
SMIM8-207ENST00000608525 PPP4R3CPQ6ZMV5 832 aa23.94■■□□□ 1.42
SMIM8-207ENST00000608525 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
SMIM8-207ENST00000608525 KCNA4P22459 653 aa23.49■■□□□ 1.35
SMIM8-207ENST00000608525 MAPK8IP2Q13387 824 aaPredicted RBP23.38■■□□□ 1.33
SMIM8-207ENST00000608525 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
SMIM8-207ENST00000608525 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
SMIM8-207ENST00000608525 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
SMIM8-207ENST00000608525 NPM3O75607 178 aaKnown RBP23■■□□□ 1.27
SMIM8-207ENST00000608525 RNF216Q9NWF9 866 aaPredicted RBP22.81■■□□□ 1.24
SMIM8-207ENST00000608525 HOXD11P31277 338 aaPredicted RBP22.7■■□□□ 1.22
SMIM8-207ENST00000608525 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
SMIM8-207ENST00000608525 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
SMIM8-207ENST00000608525 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
SMIM8-207ENST00000608525 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
SMIM8-207ENST00000608525 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
SMIM8-207ENST00000608525 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
SMIM8-207ENST00000608525 SLC4A2P04920 1241 aa21.71■■□□□ 1.07
SMIM8-207ENST00000608525 ZBTB22O15209 634 aa21.62■■□□□ 1.05
SMIM8-207ENST00000608525 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
SMIM8-207ENST00000608525 FOXD4L1Q9NU39 408 aa21.61■■□□□ 1.05
SMIM8-207ENST00000608525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.54■■□□□ 1.041e-6■■□□□ 12.2
SMIM8-207ENST00000608525 MYCNP04198 464 aaPredicted RBP21.27■■□□□ 1
SMIM8-207ENST00000608525 U3KPZ7 1027 aaPredicted RBP21.23■□□□□ 0.99
SMIM8-207ENST00000608525 RNF39Q9H2S5 420 aa21.17■□□□□ 0.98
SMIM8-207ENST00000608525 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
SMIM8-207ENST00000608525 ABCC9O60706 1549 aa21.09■□□□□ 0.97
SMIM8-207ENST00000608525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
SMIM8-207ENST00000608525 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
SMIM8-207ENST00000608525 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
SMIM8-207ENST00000608525 SAMD1Q6SPF0 538 aaPredicted RBP20.97■□□□□ 0.95
SMIM8-207ENST00000608525 C1QBPQ07021 282 aaKnown RBP20.95■□□□□ 0.94
SMIM8-207ENST00000608525 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
SMIM8-207ENST00000608525 ATXN8OSP0DMR3 200 aa20.93■□□□□ 0.94
SMIM8-207ENST00000608525 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
SMIM8-207ENST00000608525 APLP2Q06481 763 aa20.8■□□□□ 0.92
SMIM8-207ENST00000608525 NACADO15069 1562 aa20.79■□□□□ 0.92
SMIM8-207ENST00000608525 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
SMIM8-207ENST00000608525 ATF5Q9Y2D1 282 aaPredicted RBP20.64■□□□□ 0.89
SMIM8-207ENST00000608525 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
SMIM8-207ENST00000608525 CAPN15O75808 1086 aa20.47■□□□□ 0.87
SMIM8-207ENST00000608525 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
SMIM8-207ENST00000608525 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
SMIM8-207ENST00000608525 TRHP20396 242 aaPredicted RBP20.39■□□□□ 0.85
SMIM8-207ENST00000608525 SHROOM4Q9ULL8 1493 aa20.21■□□□□ 0.83
SMIM8-207ENST00000608525 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
SMIM8-207ENST00000608525 DSG3P32926 999 aa20.17■□□□□ 0.82
SMIM8-207ENST00000608525 POLA2Q14181 598 aa20.14■□□□□ 0.81
SMIM8-207ENST00000608525 ABCB7O75027 752 aa20.06■□□□□ 0.8
SMIM8-207ENST00000608525 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
SMIM8-207ENST00000608525 ZBTB12Q9Y330 459 aaPredicted RBP19.87■□□□□ 0.77
SMIM8-207ENST00000608525 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.77
SMIM8-207ENST00000608525 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMIM8-207ENST00000608525 FBLN2P98095 1184 aa19.79■□□□□ 0.76
SMIM8-207ENST00000608525 MKRN4PQ13434 485 aaPredicted RBP19.79■□□□□ 0.76
SMIM8-207ENST00000608525 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
SMIM8-207ENST00000608525 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
SMIM8-207ENST00000608525 FKBP8Q14318 412 aa19.47■□□□□ 0.71
SMIM8-207ENST00000608525 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
SMIM8-207ENST00000608525 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
SMIM8-207ENST00000608525 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
SMIM8-207ENST00000608525 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
SMIM8-207ENST00000608525 SPDYE4A6NLX3 237 aa19.38■□□□□ 0.69
SMIM8-207ENST00000608525 MROH2BQ7Z745 1585 aa19.38■□□□□ 0.69
SMIM8-207ENST00000608525 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
SMIM8-207ENST00000608525 SPDYE2BA6NHP3 402 aa19.34■□□□□ 0.69
SMIM8-207ENST00000608525 SPDYE6P0CI01 402 aa19.34■□□□□ 0.69
SMIM8-207ENST00000608525 SPDYE2Q495Y8 402 aa19.34■□□□□ 0.69
SMIM8-207ENST00000608525 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
SMIM8-207ENST00000608525 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
SMIM8-207ENST00000608525 RBM42Q9BTD8 480 aaKnown RBP19.23■□□□□ 0.67
SMIM8-207ENST00000608525 ZNF692Q9BU19 519 aaPredicted RBP19.23■□□□□ 0.67
SMIM8-207ENST00000608525 SSUH2Q9Y2M2 353 aa19.21■□□□□ 0.67
SMIM8-207ENST00000608525 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
SMIM8-207ENST00000608525 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
SMIM8-207ENST00000608525 PROM2Q8N271 834 aa19.17■□□□□ 0.66
SMIM8-207ENST00000608525 WIZO95785 1651 aa19.15■□□□□ 0.66
SMIM8-207ENST00000608525 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
SMIM8-207ENST00000608525 TOP2AP11388 1531 aaKnown RBP19.11■□□□□ 0.65
SMIM8-207ENST00000608525 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
SMIM8-207ENST00000608525 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
SMIM8-207ENST00000608525 AKT1S1Q96B36 256 aa19.03■□□□□ 0.64
SMIM8-207ENST00000608525 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
SMIM8-207ENST00000608525 FBXO3Q9UK99 471 aa18.83■□□□□ 0.6
SMIM8-207ENST00000608525 REM2Q8IYK8 340 aaPredicted RBP18.81■□□□□ 0.6
SMIM8-207ENST00000608525 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
SMIM8-207ENST00000608525 SPDYE1Q8NFV5 336 aaPredicted RBP18.72■□□□□ 0.59
SMIM8-207ENST00000608525 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
SMIM8-207ENST00000608525 CFTRP13569 1480 aa18.63■□□□□ 0.57
SMIM8-207ENST00000608525 PITPNM1O00562 1244 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms