RNA–Protein interactions for RNA: ENST00000608056.1

AC009229.3-201, humanhuman

BASIC

Gene AC009229.3, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009229.3-201ENST00000608056 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
AC009229.3-201ENST00000608056 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
AC009229.3-201ENST00000608056 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
AC009229.3-201ENST00000608056 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
AC009229.3-201ENST00000608056 FOXD1Q16676 465 aa14.27□□□□□ -0.13
AC009229.3-201ENST00000608056 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
AC009229.3-201ENST00000608056 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
AC009229.3-201ENST00000608056 ADRA2BP18089 450 aa13.45□□□□□ -0.26
AC009229.3-201ENST00000608056 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
AC009229.3-201ENST00000608056 MSH5O43196 834 aa13.34□□□□□ -0.27
AC009229.3-201ENST00000608056 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
AC009229.3-201ENST00000608056 SCAF1Q9H7N4 1312 aaKnown RBP12.4□□□□□ -0.42
AC009229.3-201ENST00000608056 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
AC009229.3-201ENST00000608056 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
AC009229.3-201ENST00000608056 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
AC009229.3-201ENST00000608056 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
AC009229.3-201ENST00000608056 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
AC009229.3-201ENST00000608056 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
AC009229.3-201ENST00000608056 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
AC009229.3-201ENST00000608056 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
AC009229.3-201ENST00000608056 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
AC009229.3-201ENST00000608056 KCNA4P22459 653 aa11.59□□□□□ -0.55
AC009229.3-201ENST00000608056 DNAJC5BQ9UF47 199 aa11.46□□□□□ -0.57
AC009229.3-201ENST00000608056 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
AC009229.3-201ENST00000608056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.6
AC009229.3-201ENST00000608056 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
AC009229.3-201ENST00000608056 C1QBPQ07021 282 aaKnown RBP11.25□□□□□ -0.61
AC009229.3-201ENST00000608056 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
AC009229.3-201ENST00000608056 U3KPZ7 1027 aaPredicted RBP11.06□□□□□ -0.64
AC009229.3-201ENST00000608056 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
AC009229.3-201ENST00000608056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
AC009229.3-201ENST00000608056 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
AC009229.3-201ENST00000608056 APLP2Q06481 763 aa10.87□□□□□ -0.67
AC009229.3-201ENST00000608056 CAPN15O75808 1086 aa10.82□□□□□ -0.68
AC009229.3-201ENST00000608056 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
AC009229.3-201ENST00000608056 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
AC009229.3-201ENST00000608056 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
AC009229.3-201ENST00000608056 FOXD4L1Q9NU39 408 aa10.79□□□□□ -0.68
AC009229.3-201ENST00000608056 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
AC009229.3-201ENST00000608056 DSG3P32926 999 aa10.7□□□□□ -0.7
AC009229.3-201ENST00000608056 TRHP20396 242 aaPredicted RBP10.69□□□□□ -0.7
AC009229.3-201ENST00000608056 ZBTB22O15209 634 aa10.64□□□□□ -0.71
AC009229.3-201ENST00000608056 ABCB7O75027 752 aa10.57□□□□□ -0.72
AC009229.3-201ENST00000608056 ATXN8OSP0DMR3 200 aa10.48□□□□□ -0.73
AC009229.3-201ENST00000608056 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
AC009229.3-201ENST00000608056 POLA2Q14181 598 aa10.45□□□□□ -0.74
AC009229.3-201ENST00000608056 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
AC009229.3-201ENST00000608056 ZBTB12Q9Y330 459 aaPredicted RBP10.33□□□□□ -0.76
AC009229.3-201ENST00000608056 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
AC009229.3-201ENST00000608056 RBM42Q9BTD8 480 aaKnown RBP10.27□□□□□ -0.77
AC009229.3-201ENST00000608056 FBLN2P98095 1184 aa10.14□□□□□ -0.79
AC009229.3-201ENST00000608056 OSCARQ8IYS5 282 aa10.11□□□□□ -0.79
AC009229.3-201ENST00000608056 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
AC009229.3-201ENST00000608056 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
AC009229.3-201ENST00000608056 SPDYE2BA6NHP3 402 aa10□□□□□ -0.81
AC009229.3-201ENST00000608056 SPDYE6P0CI01 402 aa10□□□□□ -0.81
AC009229.3-201ENST00000608056 SPDYE2Q495Y8 402 aa10□□□□□ -0.81
AC009229.3-201ENST00000608056 POTEHQ6S545 545 aa9.95□□□□□ -0.82
AC009229.3-201ENST00000608056 CHRDL2Q6WN34 429 aa9.93□□□□□ -0.82
AC009229.3-201ENST00000608056 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
AC009229.3-201ENST00000608056 ZNF692Q9BU19 519 aaPredicted RBP9.89□□□□□ -0.83
AC009229.3-201ENST00000608056 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
AC009229.3-201ENST00000608056 PITPNM1O00562 1244 aa9.82□□□□□ -0.84
AC009229.3-201ENST00000608056 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
AC009229.3-201ENST00000608056 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
AC009229.3-201ENST00000608056 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
AC009229.3-201ENST00000608056 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
AC009229.3-201ENST00000608056 CLEC11AQ9Y240 323 aa9.7□□□□□ -0.86
AC009229.3-201ENST00000608056 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
AC009229.3-201ENST00000608056 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
AC009229.3-201ENST00000608056 PRKAR2AP13861 404 aaKnown RBP9.57□□□□□ -0.88
AC009229.3-201ENST00000608056 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
AC009229.3-201ENST00000608056 HAX1O00165 279 aa9.5□□□□□ -0.89
AC009229.3-201ENST00000608056 PROM2Q8N271 834 aa9.49□□□□□ -0.89
AC009229.3-201ENST00000608056 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
AC009229.3-201ENST00000608056 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
AC009229.3-201ENST00000608056 C19orf67A6NJJ6 358 aa9.39□□□□□ -0.91
AC009229.3-201ENST00000608056 FARP1Q9Y4F1 1045 aaPredicted RBP9.39□□□□□ -0.91
AC009229.3-201ENST00000608056 FKBP8Q14318 412 aa9.38□□□□□ -0.91
AC009229.3-201ENST00000608056 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
AC009229.3-201ENST00000608056 EVX2Q03828 476 aa9.33□□□□□ -0.92
AC009229.3-201ENST00000608056 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
AC009229.3-201ENST00000608056 NPM1P06748 294 aaKnown RBP eCLIP9.27□□□□□ -0.93
AC009229.3-201ENST00000608056 PLEKHG5O94827 1062 aa9.25□□□□□ -0.93
AC009229.3-201ENST00000608056 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
AC009229.3-201ENST00000608056 MIER1Q8N108 512 aa9.22□□□□□ -0.93
AC009229.3-201ENST00000608056 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
AC009229.3-201ENST00000608056 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
AC009229.3-201ENST00000608056 CLCN6P51797 869 aa9.19□□□□□ -0.94
AC009229.3-201ENST00000608056 GABBR2O75899 941 aa9.18□□□□□ -0.94
AC009229.3-201ENST00000608056 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
AC009229.3-201ENST00000608056 ZRANB1Q9UGI0 708 aa9.18□□□□□ -0.94
AC009229.3-201ENST00000608056 ZNF579Q8NAF0 562 aaKnown RBP9.17□□□□□ -0.94
AC009229.3-201ENST00000608056 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
AC009229.3-201ENST00000608056 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
AC009229.3-201ENST00000608056 TSPYL2Q9H2G4 693 aaPredicted RBP9.05□□□□□ -0.96
AC009229.3-201ENST00000608056 VASPP50552 380 aaPredicted RBP9.04□□□□□ -0.96
AC009229.3-201ENST00000608056 RASEFQ8IZ41 740 aa9.03□□□□□ -0.96
AC009229.3-201ENST00000608056 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
AC009229.3-201ENST00000608056 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms