RNA–Protein interactions for RNA: ENST00000606574.1

RNU1-29P-201, Transcript of RNA, U1 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU1-29P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-29P-201ENST00000606574 AEBP2Q6ZN18 517 aaPredicted RBP3.76□□□□□ -1.81
RNU1-29P-201ENST00000606574 CHIC1Q5VXU3 224 aa3.66□□□□□ -1.82
RNU1-29P-201ENST00000606574 SENP3Q9H4L4 574 aaPredicted RBP3.34□□□□□ -1.87
RNU1-29P-201ENST00000606574 PHF23Q9BUL5 403 aaPredicted RBP3.25□□□□□ -1.89
RNU1-29P-201ENST00000606574 POTEDQ86YR6 584 aa3.1□□□□□ -1.91
RNU1-29P-201ENST00000606574 FOXD1Q16676 465 aa3.07□□□□□ -1.92
RNU1-29P-201ENST00000606574 MSH5O43196 834 aa2.99□□□□□ -1.93
RNU1-29P-201ENST00000606574 PIAS4Q8N2W9 510 aaPredicted RBP2.95□□□□□ -1.94
RNU1-29P-201ENST00000606574 ADRA2BP18089 450 aa2.8□□□□□ -1.96
RNU1-29P-201ENST00000606574 PLPPR3Q6T4P5 718 aa2.79□□□□□ -1.96
RNU1-29P-201ENST00000606574 DCAF8L1A6NGE4 600 aa2.74□□□□□ -1.97
RNU1-29P-201ENST00000606574 PPP6R1Q9UPN7 881 aa2.74□□□□□ -1.97
RNU1-29P-201ENST00000606574 CACNB1Q02641 598 aaPredicted RBP2.73□□□□□ -1.97
RNU1-29P-201ENST00000606574 SCAF1Q9H7N4 1312 aaKnown RBP2.63□□□□□ -1.99
RNU1-29P-201ENST00000606574 MAPK8IP2Q13387 824 aaPredicted RBP2.59□□□□□ -1.99
RNU1-29P-201ENST00000606574 DMRT2Q9Y5R5 561 aa2.57□□□□□ -2
RNU1-29P-201ENST00000606574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNU1-29P-201ENST00000606574 C1QBPQ07021 282 aaKnown RBP2.46□□□□□ -2.02
RNU1-29P-201ENST00000606574 RNF39Q9H2S5 420 aa2.46□□□□□ -2.02
RNU1-29P-201ENST00000606574 POTEHQ6S545 545 aa2.45□□□□□ -2.02
RNU1-29P-201ENST00000606574 CAPN15O75808 1086 aa2.43□□□□□ -2.02
RNU1-29P-201ENST00000606574 PPP4R3CPQ6ZMV5 832 aa2.42□□□□□ -2.02
RNU1-29P-201ENST00000606574 CNKSR2Q8WXI2 1034 aa2.4□□□□□ -2.03
RNU1-29P-201ENST00000606574 HOXD11P31277 338 aaPredicted RBP2.37□□□□□ -2.03
RNU1-29P-201ENST00000606574 RNF216Q9NWF9 866 aaPredicted RBP2.37□□□□□ -2.03
RNU1-29P-201ENST00000606574 TRHP20396 242 aaPredicted RBP2.36□□□□□ -2.03
RNU1-29P-201ENST00000606574 NCBP3Q53F19 620 aaKnown RBP2.36□□□□□ -2.03
RNU1-29P-201ENST00000606574 ABCB7O75027 752 aa2.34□□□□□ -2.03
RNU1-29P-201ENST00000606574 APLP2Q06481 763 aa2.33□□□□□ -2.04
RNU1-29P-201ENST00000606574 SPINK5Q9NQ38 1064 aaPredicted RBP2.31□□□□□ -2.04
RNU1-29P-201ENST00000606574 DSG3P32926 999 aa2.28□□□□□ -2.04
RNU1-29P-201ENST00000606574 RBM42Q9BTD8 480 aaKnown RBP2.28□□□□□ -2.04
RNU1-29P-201ENST00000606574 ZNF219Q9P2Y4 722 aaPredicted RBP2.28□□□□□ -2.04
RNU1-29P-201ENST00000606574 HAX1O00165 279 aa2.26□□□□□ -2.05
RNU1-29P-201ENST00000606574 PLSCR2Q9NRY7 297 aa2.26□□□□□ -2.05
RNU1-29P-201ENST00000606574 U3KPZ7 1027 aaPredicted RBP2.26□□□□□ -2.05
RNU1-29P-201ENST00000606574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.25□□□□□ -2.05
RNU1-29P-201ENST00000606574 HNRNPUL2Q1KMD3 747 aaKnown RBP2.25□□□□□ -2.05
RNU1-29P-201ENST00000606574 CHRDL2Q6WN34 429 aa2.25□□□□□ -2.05
RNU1-29P-201ENST00000606574 DNAJC5BQ9UF47 199 aa2.25□□□□□ -2.05
RNU1-29P-201ENST00000606574 NPM3O75607 178 aaKnown RBP2.23□□□□□ -2.05
RNU1-29P-201ENST00000606574 SP7Q8TDD2 431 aaPredicted RBP2.23□□□□□ -2.05
RNU1-29P-201ENST00000606574 SAMD1Q6SPF0 538 aaPredicted RBP2.21□□□□□ -2.06
RNU1-29P-201ENST00000606574 POLA2Q14181 598 aa2.19□□□□□ -2.06
RNU1-29P-201ENST00000606574 CLEC11AQ9Y240 323 aa2.17□□□□□ -2.06
RNU1-29P-201ENST00000606574 ZBTB12Q9Y330 459 aaPredicted RBP2.15□□□□□ -2.07
RNU1-29P-201ENST00000606574 OSCARQ8IYS5 282 aa2.14□□□□□ -2.07
RNU1-29P-201ENST00000606574 PIP4P2Q8N4L2 257 aa2.14□□□□□ -2.07
RNU1-29P-201ENST00000606574 AKT1S1Q96B36 256 aa2.14□□□□□ -2.07
RNU1-29P-201ENST00000606574 REM2Q8IYK8 340 aaPredicted RBP2.13□□□□□ -2.07
RNU1-29P-201ENST00000606574 LHX8Q68G74 356 aa2.12□□□□□ -2.07
RNU1-29P-201ENST00000606574 PITPNM1O00562 1244 aa2.11□□□□□ -2.07
RNU1-29P-201ENST00000606574 MYCNP04198 464 aaPredicted RBP2.11□□□□□ -2.07
RNU1-29P-201ENST00000606574 PRKAR2AP13861 404 aaKnown RBP2.11□□□□□ -2.07
RNU1-29P-201ENST00000606574 SLC4A2P04920 1241 aa2.1□□□□□ -2.07
RNU1-29P-201ENST00000606574 DCBLD2Q96PD2 775 aa2.1□□□□□ -2.07
RNU1-29P-201ENST00000606574 FBLN2P98095 1184 aa2.09□□□□□ -2.07
RNU1-29P-201ENST00000606574 KCNA4P22459 653 aa2.08□□□□□ -2.08
RNU1-29P-201ENST00000606574 CHADLQ6NUI6 762 aa2.07□□□□□ -2.08
RNU1-29P-201ENST00000606574 SPDYE1Q8NFV5 336 aaPredicted RBP2.07□□□□□ -2.08
RNU1-29P-201ENST00000606574 PRR29P0C7W0 189 aa2.06□□□□□ -2.08
RNU1-29P-201ENST00000606574 ZNF692Q9BU19 519 aaPredicted RBP2.06□□□□□ -2.08
RNU1-29P-201ENST00000606574 GABBR2O75899 941 aa2.05□□□□□ -2.08
RNU1-29P-201ENST00000606574 FXR2P51116 673 aaKnown RBP eCLIP2.05□□□□□ -2.08
RNU1-29P-201ENST00000606574 EVX2Q03828 476 aa2.05□□□□□ -2.08
RNU1-29P-201ENST00000606574 PAK3O75914 559 aaPredicted RBP2.04□□□□□ -2.08
RNU1-29P-201ENST00000606574 CD44P16070 742 aaKnown RBP2.04□□□□□ -2.08
RNU1-29P-201ENST00000606574 SPDYE2BA6NHP3 402 aa2.03□□□□□ -2.08
RNU1-29P-201ENST00000606574 SPDYE6P0CI01 402 aa2.03□□□□□ -2.08
RNU1-29P-201ENST00000606574 SPDYE2Q495Y8 402 aa2.03□□□□□ -2.08
RNU1-29P-201ENST00000606574 POTEMA6NI47 508 aa2.02□□□□□ -2.09
RNU1-29P-201ENST00000606574 FAM163AQ96GL9 167 aaPredicted RBP2.02□□□□□ -2.09
RNU1-29P-201ENST00000606574 ZRANB1Q9UGI0 708 aa2.02□□□□□ -2.09
RNU1-29P-201ENST00000606574 POTEGQ6S5H5 508 aa2.01□□□□□ -2.09
RNU1-29P-201ENST00000606574 SLC4A1APQ9BWU0 796 aaKnown RBP2.01□□□□□ -2.09
RNU1-29P-201ENST00000606574 FOXD4L1Q9NU39 408 aa2.01□□□□□ -2.09
RNU1-29P-201ENST00000606574 C19orf67A6NJJ6 358 aa2□□□□□ -2.09
RNU1-29P-201ENST00000606574 PABPN1Q86U42 306 aaKnown RBP eCLIP2□□□□□ -2.09
RNU1-29P-201ENST00000606574 ATF5Q9Y2D1 282 aaPredicted RBP2□□□□□ -2.09
RNU1-29P-201ENST00000606574 SCUBE2Q9NQ36 999 aa1.98□□□□□ -2.09
RNU1-29P-201ENST00000606574 FARP1Q9Y4F1 1045 aaPredicted RBP1.97□□□□□ -2.09
RNU1-29P-201ENST00000606574 SEC24BO95487 1268 aa1.96□□□□□ -2.1
RNU1-29P-201ENST00000606574 MAMSTRQ6ZN01 415 aa1.96□□□□□ -2.1
RNU1-29P-201ENST00000606574 CLCN6P51797 869 aa1.95□□□□□ -2.1
RNU1-29P-201ENST00000606574 GALR2O43603 387 aaPredicted RBP1.94□□□□□ -2.1
RNU1-29P-201ENST00000606574 PLEKHG5O94827 1062 aa1.94□□□□□ -2.1
RNU1-29P-201ENST00000606574 NPM1P06748 294 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU1-29P-201ENST00000606574 PHF12Q96QT6 1004 aa1.94□□□□□ -2.1
RNU1-29P-201ENST00000606574 PCDH10Q9P2E7 1040 aa1.94□□□□□ -2.1
RNU1-29P-201ENST00000606574 METRNQ9UJH8 293 aa1.94□□□□□ -2.1
RNU1-29P-201ENST00000606574 POTEIP0CG38 1075 aa1.93□□□□□ -2.1
RNU1-29P-201ENST00000606574 TSPYL2Q9H2G4 693 aaPredicted RBP1.93□□□□□ -2.1
RNU1-29P-201ENST00000606574 CDAN1Q8IWY9 1227 aa1.92□□□□□ -2.1
RNU1-29P-201ENST00000606574 OTUD5Q96G74 571 aa1.92□□□□□ -2.1
RNU1-29P-201ENST00000606574 STAG3Q9UJ98 1225 aa1.92□□□□□ -2.1
RNU1-29P-201ENST00000606574 ZNF579Q8NAF0 562 aaKnown RBP1.91□□□□□ -2.1
RNU1-29P-201ENST00000606574 SLC39A7Q92504 469 aa1.91□□□□□ -2.1
RNU1-29P-201ENST00000606574 SSUH2Q9Y2M2 353 aa1.91□□□□□ -2.1
RNU1-29P-201ENST00000606574 ATXN8OSP0DMR3 200 aa1.9□□□□□ -2.11
RNU1-29P-201ENST00000606574 C7P10643 843 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms