RNA–Protein interactions for RNA: ENST00000606352.1

RNU6-90P-201, Transcript of RNA, U6 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU6-90P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-90P-201ENST00000606352 AEBP2Q6ZN18 517 aaPredicted RBP9.93□□□□□ -0.82
RNU6-90P-201ENST00000606352 CHIC1Q5VXU3 224 aa9.22□□□□□ -0.93
RNU6-90P-201ENST00000606352 SENP3Q9H4L4 574 aaPredicted RBP8.45□□□□□ -1.06
RNU6-90P-201ENST00000606352 PHF23Q9BUL5 403 aaPredicted RBP8.35□□□□□ -1.07
RNU6-90P-201ENST00000606352 FOXD1Q16676 465 aa7.96□□□□□ -1.14
RNU6-90P-201ENST00000606352 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
RNU6-90P-201ENST00000606352 MSH5O43196 834 aa7.5□□□□□ -1.21
RNU6-90P-201ENST00000606352 PIAS4Q8N2W9 510 aaPredicted RBP7.31□□□□□ -1.24
RNU6-90P-201ENST00000606352 PPP6R1Q9UPN7 881 aa7.27□□□□□ -1.25
RNU6-90P-201ENST00000606352 ADRA2BP18089 450 aa7.19□□□□□ -1.26
RNU6-90P-201ENST00000606352 PLPPR3Q6T4P5 718 aa7.16□□□□□ -1.26
RNU6-90P-201ENST00000606352 MAPK8IP2Q13387 824 aaPredicted RBP6.71□□□□□ -1.34
RNU6-90P-201ENST00000606352 DMRT2Q9Y5R5 561 aa6.69□□□□□ -1.34
RNU6-90P-201ENST00000606352 CACNB1Q02641 598 aaPredicted RBP6.6□□□□□ -1.35
RNU6-90P-201ENST00000606352 SCAF1Q9H7N4 1312 aaKnown RBP6.54□□□□□ -1.36
RNU6-90P-201ENST00000606352 RNF39Q9H2S5 420 aa6.41□□□□□ -1.38
RNU6-90P-201ENST00000606352 DCAF8L1A6NGE4 600 aa6.36□□□□□ -1.39
RNU6-90P-201ENST00000606352 HOXD11P31277 338 aaPredicted RBP6.36□□□□□ -1.39
RNU6-90P-201ENST00000606352 C1QBPQ07021 282 aaKnown RBP6.28□□□□□ -1.4
RNU6-90P-201ENST00000606352 PPP4R3CPQ6ZMV5 832 aa6.27□□□□□ -1.41
RNU6-90P-201ENST00000606352 RNF216Q9NWF9 866 aaPredicted RBP6.22□□□□□ -1.41
RNU6-90P-201ENST00000606352 CNKSR2Q8WXI2 1034 aa6.2□□□□□ -1.42
RNU6-90P-201ENST00000606352 DNAJC5BQ9UF47 199 aa6.2□□□□□ -1.42
RNU6-90P-201ENST00000606352 POTEHQ6S545 545 aa6.05□□□□□ -1.44
RNU6-90P-201ENST00000606352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6□□□□□ -1.45
RNU6-90P-201ENST00000606352 DSG3P32926 999 aa5.91□□□□□ -1.46
RNU6-90P-201ENST00000606352 NCBP3Q53F19 620 aaKnown RBP5.91□□□□□ -1.46
RNU6-90P-201ENST00000606352 SPINK5Q9NQ38 1064 aaPredicted RBP5.88□□□□□ -1.47
RNU6-90P-201ENST00000606352 U3KPZ7 1027 aaPredicted RBP5.88□□□□□ -1.47
RNU6-90P-201ENST00000606352 NPM3O75607 178 aaKnown RBP5.86□□□□□ -1.47
RNU6-90P-201ENST00000606352 CAPN15O75808 1086 aa5.83□□□□□ -1.48
RNU6-90P-201ENST00000606352 SLC4A2P04920 1241 aa5.69□□□□□ -1.5
RNU6-90P-201ENST00000606352 TRHP20396 242 aaPredicted RBP5.69□□□□□ -1.5
RNU6-90P-201ENST00000606352 ABCB7O75027 752 aa5.68□□□□□ -1.5
RNU6-90P-201ENST00000606352 ZNF219Q9P2Y4 722 aaPredicted RBP5.66□□□□□ -1.5
RNU6-90P-201ENST00000606352 APLP2Q06481 763 aa5.63□□□□□ -1.51
RNU6-90P-201ENST00000606352 CHRDL2Q6WN34 429 aa5.6□□□□□ -1.51
RNU6-90P-201ENST00000606352 RBM42Q9BTD8 480 aaKnown RBP5.6□□□□□ -1.51
RNU6-90P-201ENST00000606352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.58□□□□□ -1.52
RNU6-90P-201ENST00000606352 HNRNPUL2Q1KMD3 747 aaKnown RBP5.58□□□□□ -1.52
RNU6-90P-201ENST00000606352 SAMD1Q6SPF0 538 aaPredicted RBP5.54□□□□□ -1.52
RNU6-90P-201ENST00000606352 SP7Q8TDD2 431 aaPredicted RBP5.54□□□□□ -1.52
RNU6-90P-201ENST00000606352 KCNA4P22459 653 aa5.5□□□□□ -1.53
RNU6-90P-201ENST00000606352 POLA2Q14181 598 aa5.5□□□□□ -1.53
RNU6-90P-201ENST00000606352 AKT1S1Q96B36 256 aa5.45□□□□□ -1.54
RNU6-90P-201ENST00000606352 PIP4P2Q8N4L2 257 aa5.43□□□□□ -1.54
RNU6-90P-201ENST00000606352 REM2Q8IYK8 340 aaPredicted RBP5.41□□□□□ -1.54
RNU6-90P-201ENST00000606352 MYCNP04198 464 aaPredicted RBP5.39□□□□□ -1.55
RNU6-90P-201ENST00000606352 HAX1O00165 279 aa5.38□□□□□ -1.55
RNU6-90P-201ENST00000606352 FXR2P51116 673 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNU6-90P-201ENST00000606352 EVX2Q03828 476 aa5.36□□□□□ -1.55
RNU6-90P-201ENST00000606352 ATF5Q9Y2D1 282 aaPredicted RBP5.34□□□□□ -1.55
RNU6-90P-201ENST00000606352 PITPNM1O00562 1244 aa5.33□□□□□ -1.56
RNU6-90P-201ENST00000606352 ZBTB12Q9Y330 459 aaPredicted RBP5.32□□□□□ -1.56
RNU6-90P-201ENST00000606352 OSCARQ8IYS5 282 aa5.29□□□□□ -1.56
RNU6-90P-201ENST00000606352 C19orf67A6NJJ6 358 aa5.21□□□□□ -1.58
RNU6-90P-201ENST00000606352 LHX8Q68G74 356 aa5.2□□□□□ -1.58
RNU6-90P-201ENST00000606352 FOXD4L1Q9NU39 408 aa5.2□□□□□ -1.58
RNU6-90P-201ENST00000606352 GABBR2O75899 941 aa5.19□□□□□ -1.58
RNU6-90P-201ENST00000606352 PRKAR2AP13861 404 aaKnown RBP5.19□□□□□ -1.58
RNU6-90P-201ENST00000606352 SPDYE2BA6NHP3 402 aa5.16□□□□□ -1.58
RNU6-90P-201ENST00000606352 SPDYE6P0CI01 402 aa5.16□□□□□ -1.58
RNU6-90P-201ENST00000606352 SPDYE2Q495Y8 402 aa5.16□□□□□ -1.58
RNU6-90P-201ENST00000606352 SPDYE1Q8NFV5 336 aaPredicted RBP5.13□□□□□ -1.59
RNU6-90P-201ENST00000606352 SLC4A1APQ9BWU0 796 aaKnown RBP5.12□□□□□ -1.59
RNU6-90P-201ENST00000606352 CLEC11AQ9Y240 323 aa5.12□□□□□ -1.59
RNU6-90P-201ENST00000606352 POTEIP0CG38 1075 aa5.11□□□□□ -1.59
RNU6-90P-201ENST00000606352 ATXN8OSP0DMR3 200 aa5.09□□□□□ -1.59
RNU6-90P-201ENST00000606352 FBLN2P98095 1184 aa5.08□□□□□ -1.6
RNU6-90P-201ENST00000606352 MKRN4PQ13434 485 aaPredicted RBP5.08□□□□□ -1.6
RNU6-90P-201ENST00000606352 CHADLQ6NUI6 762 aa5.08□□□□□ -1.6
RNU6-90P-201ENST00000606352 SSUH2Q9Y2M2 353 aa5.08□□□□□ -1.6
RNU6-90P-201ENST00000606352 ZBTB22O15209 634 aa5.07□□□□□ -1.6
RNU6-90P-201ENST00000606352 ZNF692Q9BU19 519 aaPredicted RBP5.06□□□□□ -1.6
RNU6-90P-201ENST00000606352 PLSCR2Q9NRY7 297 aa5.04□□□□□ -1.6
RNU6-90P-201ENST00000606352 PRR29P0C7W0 189 aa5.02□□□□□ -1.61
RNU6-90P-201ENST00000606352 CLCN6P51797 869 aa5.01□□□□□ -1.61
RNU6-90P-201ENST00000606352 CD44P16070 742 aaKnown RBP4.99□□□□□ -1.61
RNU6-90P-201ENST00000606352 FARP1Q9Y4F1 1045 aaPredicted RBP4.99□□□□□ -1.61
RNU6-90P-201ENST00000606352 PABPN1Q86U42 306 aaKnown RBP eCLIP4.98□□□□□ -1.61
RNU6-90P-201ENST00000606352 OTUD5Q96G74 571 aa4.95□□□□□ -1.62
RNU6-90P-201ENST00000606352 DCBLD2Q96PD2 775 aa4.95□□□□□ -1.62
RNU6-90P-201ENST00000606352 POTEB2H3BUK9 544 aa4.93□□□□□ -1.62
RNU6-90P-201ENST00000606352 ZNF579Q8NAF0 562 aaKnown RBP4.92□□□□□ -1.62
RNU6-90P-201ENST00000606352 POTEMA6NI47 508 aa4.9□□□□□ -1.63
RNU6-90P-201ENST00000606352 GALR2O43603 387 aaPredicted RBP4.89□□□□□ -1.63
RNU6-90P-201ENST00000606352 ZRANB1Q9UGI0 708 aa4.89□□□□□ -1.63
RNU6-90P-201ENST00000606352 POTEGQ6S5H5 508 aa4.87□□□□□ -1.63
RNU6-90P-201ENST00000606352 CREBZFQ9NS37 354 aa4.86□□□□□ -1.63
RNU6-90P-201ENST00000606352 PELP1Q8IZL8 1130 aaKnown RBP4.85□□□□□ -1.63
RNU6-90P-201ENST00000606352 PCDH10Q9P2E7 1040 aa4.85□□□□□ -1.63
RNU6-90P-201ENST00000606352 POTEJP0CG39 1038 aa4.82□□□□□ -1.64
RNU6-90P-201ENST00000606352 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
RNU6-90P-201ENST00000606352 PHF12Q96QT6 1004 aa4.8□□□□□ -1.64
RNU6-90P-201ENST00000606352 ASTLQ6HA08 431 aaPredicted RBP4.78□□□□□ -1.64
RNU6-90P-201ENST00000606352 STAG3Q9UJ98 1225 aa4.78□□□□□ -1.64
RNU6-90P-201ENST00000606352 MNX1P50219 401 aaPredicted RBP4.77□□□□□ -1.65
RNU6-90P-201ENST00000606352 ATMINO43313 823 aaPredicted RBP4.76□□□□□ -1.65
RNU6-90P-201ENST00000606352 C7P10643 843 aa4.76□□□□□ -1.65
RNU6-90P-201ENST00000606352 METRNQ9UJH8 293 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms